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The map label for this gene is 189025781

Identifier: 189025781

GI number: 189025781

Start: 600385

End: 601596

Strand: Direct

Name: 189025781

Synonym: TPASS_0553

Alternate gene names: NA

Gene position: 600385-601596 (Clockwise)

Preceding gene: 189025777

Following gene: 189025782

Centisome position: 52.69

GC content: 47.69

Gene sequence:

>1212_bases
ATGGAAAAACAGTCACCCGCACAAACTATCTCGCTCTTCGTGCTCCTCGCGCTCATGTTTGTACTCGTGTGCATGCTGTT
CGTACCCTACCTAACGGTGCTTCTCTGGTCGAGCATCCTTGCTATCCTGCTTTCACCGTGTTATCGCGCACTGTGTGCAA
GAATAGATATGCATGCTTTTACGCGTACTCGACATCTCGTTTCTCACATGAATGGAGAGGATGGATGTACCGCGGCGATT
ACCCGAGCGACGCGCTTTCAAAAAAAGATGCTCGCAGCGGTATTTTCACTTGTGATTACCCTTCTGGTGACCACTGTATT
TTTTTTCATTGCAATTAGTTTGTTTGGACAGGGAAAGCTCTTGTTTGACAAACTTTCGCTCTTCTTCAGGGAATACGATC
TATTTGAAGGTGCAAAGCAACGGAGCTTTACCGCGCTTATTTTTAAACTTTCCCGAGGAACGGTTGATATCTCTACCCTC
AATGTGGAGGAGCATCTGCTACGGTTCTTCGGCAAGCATGTAGAATCGGTGTTTGTGTATACACAAATTTTTGTCAAAAA
CATCGCTCGCGCAGCCCTTTCCACGTTGTTCTTTAGTTTTACCCTATACTTTTTCTTTCTCGATGGGGAACATTTGTCCT
GTCTGCTCATCGCTGCACTACCCTTGAGGAAGCGCGCAAGCGCACAGTTGTTAGAAAAATGCAAAGAGGCAACGCGTCAT
TTGTTCAAAGGTCTATTCTCCATTGCTTTTTATCAGACCTGCGTTGCATTTGTGTTCTACGGAATCTTCCGCGTGGAAGG
ACCGATGGCTTTAGCAATGCTCACCTTCTTCGCCTCATTCTTACCACTGGTCGGCTGCGCCTGCGTGTGGCTCCCAGTGG
GAATTAGCATTGGATTTACGAGCGGGTGGATGCGCGGCACCCTTTTCTTGTTTGTCGCTGGAAGTTCAATCACTATCATC
GACAGTTTCTTGCGCCCGTTGTTGCTGCAAAATAAAATGCGCATCCATCCATTGCTTATTTTTTTCTCTATGCTCGGTGG
GGTGCAGACGTTCGGCTTTAACGGTATGGTGCTCGGTCCTATTTTGGTTATCCTGCTGTTCACGGTTATCGACTTGACGC
ACGACGGGGAGTCTCACTACACGTCTATTTTCCACGACCCCCCTGCTGCAGGTGTGCACGCGCAGTCGATACACAGACAA
GGAAAAAAATAG

Upstream 100 bases:

>100_bases
CGCCGAGGACCCCTCAGGCTAACAAAAAAAGACGCAATCGTTCAAGGGTAAACCAACCGATACTCCAGGCACGCTGTGAC
CTTGCGCAAAGGGGATTACC

Downstream 100 bases:

>100_bases
GGATATCTTGCTGCTCGGCGCCCTTTTTATTACCATGCGGCCCATGACGCGCGCGTGTATATTCGATCTTGATGGAACGC
TAACGAATACGCTGGGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MEKQSPAQTISLFVLLALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAFTRTRHLVSHMNGEDGCTAAI
TRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKLLFDKLSLFFREYDLFEGAKQRSFTALIFKLSRGTVDISTL
NVEEHLLRFFGKHVESVFVYTQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRASAQLLEKCKEATRH
LFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIGFTSGWMRGTLFLFVAGSSITII
DSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLGPILVILLFTVIDLTHDGESHYTSIFHDPPAAGVHAQSIHRQ
GKK

Sequences:

>Translated_403_residues
MEKQSPAQTISLFVLLALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAFTRTRHLVSHMNGEDGCTAAI
TRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKLLFDKLSLFFREYDLFEGAKQRSFTALIFKLSRGTVDISTL
NVEEHLLRFFGKHVESVFVYTQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRASAQLLEKCKEATRH
LFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIGFTSGWMRGTLFLFVAGSSITII
DSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLGPILVILLFTVIDLTHDGESHYTSIFHDPPAAGVHAQSIHRQ
GKK
>Mature_403_residues
MEKQSPAQTISLFVLLALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAFTRTRHLVSHMNGEDGCTAAI
TRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKLLFDKLSLFFREYDLFEGAKQRSFTALIFKLSRGTVDISTL
NVEEHLLRFFGKHVESVFVYTQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRASAQLLEKCKEATRH
LFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIGFTSGWMRGTLFLFVAGSSITII
DSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLGPILVILLFTVIDLTHDGESHYTSIFHDPPAAGVHAQSIHRQ
GKK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y553_TREPA (O83564)

Other databases:

- EMBL:   AE000520
- PIR:   E71309
- RefSeq:   NP_218992.1
- ProteinModelPortal:   O83564
- GeneID:   2611547
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0553
- NMPDR:   fig|243276.1.peg.551
- TIGR:   TP_0553
- HOGENOM:   HBG250995
- OMA:   MASWDIY
- ProtClustDB:   CLSK218754
- BioCyc:   TPAL243276:TP_0553-MONOMER
- InterPro:   IPR002549
- PANTHER:   PTHR21716

Pfam domain/function: PF01594 UPF0118

EC number: NA

Molecular weight: Translated: 45285; Mature: 45285

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1fbd97d8)-; HASH(0x212274b4)-; HASH(0x213c5b1c)-; HASH(0x210d23a8)-; HASH(0x1e1ab778)-; HASH(0x20eca5b4)-; HASH(0x2094f674)-; HASH(0x210d2cdc)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQSPAQTISLFVLLALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRTRHLVSHMNGEDGCTAAITRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LFDKLSLFFREYDLFEGAKQRSFTALIFKLSRGTVDISTLNVEEHLLRFFGKHVESVFVY
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
TQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRASAQLLEKCKEATRH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIGFT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC
SGWMRGTLFLFVAGSSITIIDSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLGP
CCHHHHEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCHHHH
ILVILLFTVIDLTHDGESHYTSIFHDPPAAGVHAQSIHRQGKK
HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCH
>Mature Secondary Structure
MEKQSPAQTISLFVLLALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRTRHLVSHMNGEDGCTAAITRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LFDKLSLFFREYDLFEGAKQRSFTALIFKLSRGTVDISTLNVEEHLLRFFGKHVESVFVY
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
TQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRASAQLLEKCKEATRH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIGFT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC
SGWMRGTLFLFVAGSSITIIDSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVLGP
CCHHHHEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCHHHH
ILVILLFTVIDLTHDGESHYTSIFHDPPAAGVHAQSIHRQGKK
HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876