Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025689

Identifier: 189025689

GI number: 189025689

Start: 488060

End: 489841

Strand: Direct

Name: 189025689

Synonym: TPASS_0457

Alternate gene names: NA

Gene position: 488060-489841 (Clockwise)

Preceding gene: 189025685

Following gene: 189025690

Centisome position: 42.83

GC content: 58.02

Gene sequence:

>1782_bases
ATGCACCTGCCAAGGGGTTTGTGGGCAATGGGAACGGTTAGATCTTGCTTTTTCCCGCCCACGCGTGCGCCGATATGGGG
CCGTATGAGCTGTCTGGGTGCGCGTGCGCGCGGTGTGTTACGCATAAGTTTGGTGATAATGCTGCAGGGGCTGCTGCGCG
CGAGTGAGGTGGATGAGGAGCTGAGCAAGAAATACTCCATAGAAATCATGGTTGACTCCGGCGTTTCAGAGACAGGGGAG
CGTTTGCCGCTGTTGCCCTTTGAGCGCATCCCCGACTCGCACCATGTGCGGCGTGTTATCGCGCAGGATTGGTTTTTGGA
TGAGCCGTCTCGTGTTGCGCTGCGTGCACCTCGTAGTTACACGGACGAAACGGGCAATAGCTTTCGCGTTGAGGCGTACG
TGATTGCCGCAACCGACCACCTTGCAGTGCGCGTTACGCCTCTTTTAGCTGATCGTGCCCCAAGGGATGGTGTGCATTCT
GCGCCAGTGGCAGCGGCGCCTCGGCTGCACCTCGCGCTCGAGGCGCCCACAGGAACAAGTCGGGCGGGAAGGACAGGCGC
AGATACCCCGCAATCACCTGTGACAGACGCTGCGCCTAGTCAAGCTGTGGCGCAAGGCACATGGGTGCTGTATCGGCACA
TGCACACCGGTGCGCCGGTGTGCATACGGGTATACCCGCGCGAAAGTGCGTCGCTGTATGTACAACTTTCTGCGCCCACT
GCAGTAGAAATGCAGGGAAAGACGCATCTTGATGTGTGTCTTTTTAACGTGCACGTGCGCAAGCACGTGGCGCTTGGGTT
GTCCTTTGAACAGTTGTATACCTACTCGCTTTTGCAGCTGCGGGCGCTTACGGAGCATGCGGTGCCGTGGCGTATTTTTG
ATCCGCCGCGCACGTACAGCGCAGTAGAGTCAATGGCGAGTATCATTAAGCGCAGGAGTTACCGGCTCGCTCCACTTGAG
GATGGATGTTTTAACGAATGGGGACGCCCGGTCCACATTTCTGACGGGAGCAGTCAAAGTGACCAAGAGATTATCCGTGC
CCTGCGTGTGGACCAAGTGCCGCGGGAGATTATCGGGGGAGTGGGATCTCTTGGGTTTGCGAAGTGGGTGGTAGACGGGA
TCATTGCGCCGGTTGCCGGTCAGGGAGTGTACCTGTCTGCGCTAAAAAAGCAGACGACTATGCCGCGTACTCATTTTAAC
GCGGCGCATGAGCGCGCACGCGCACCCTTTTTTGGCATTGACTGGATACGCAACCTGGCAGCGGCAGCGTTGAGTCTTAA
TGTGCGGCGCACGGTGTACCCCGCACAGGGAGGTGTGGACGTAACGGTAGAACCCTTTGCAGTGGAGGGTGTCCCCAAAG
GGAGGATAAAGCAGGAGGCGCGGCATCCGGGTATTGCGCCCCCGTCGACGCCTGCGGGTGCTGTTCCTCCCCGTGTGACG
CAGGGTGAAACTGCGGCTGGGCCGTCGCGGTACCTAGGGTACTTGCCGCATGCAGGATACCAGACCGGGTATGTGCGTGC
GCTCTTTTACTATCTTGCAGTTATGGAACCAGGCCACTTCTATCTTGGCGTGCTCAATGAGGAGCGTGGCGTACCGCGTT
TGCGTGAATACCAGCGTGCGGCAGTGTTTTTGCCGTATTTCGATCGGTCAGGGAGATTTCAGGTAGAGGTTTTTGAAGCG
GCGCGTTTGAGCACTCTTGAAGAGTTTGTAGCGCAGTATCCCCAGCAGATGCTTGCGTTGGTGCGGGTGCGTGCGCCGGA
GATCGGTCATTTTAATCCGTAA

Upstream 100 bases:

>100_bases
CGCACACAGGACAAGAGCGAGGCGCGTGTTCATGGTATCTTGACTTCCTTAACACAGGACAGCTGCAGGGTGCAAGGCGG
GCGCACCCTAGCACAGCAGG

Downstream 100 bases:

>100_bases
CGGAAGTCAGACAGGCGGGTGCCGTCTTCCCTGTCGTTAGATTGCATTGGGTGCTTGTAGGAGGGAGGGAAAGAGCGTAG
CATCGGCAGGATGGACCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MHLPRGLWAMGTVRSCFFPPTRAPIWGRMSCLGARARGVLRISLVIMLQGLLRASEVDEELSKKYSIEIMVDSGVSETGE
RLPLLPFERIPDSHHVRRVIAQDWFLDEPSRVALRAPRSYTDETGNSFRVEAYVIAATDHLAVRVTPLLADRAPRDGVHS
APVAAAPRLHLALEAPTGTSRAGRTGADTPQSPVTDAAPSQAVAQGTWVLYRHMHTGAPVCIRVYPRESASLYVQLSAPT
AVEMQGKTHLDVCLFNVHVRKHVALGLSFEQLYTYSLLQLRALTEHAVPWRIFDPPRTYSAVESMASIIKRRSYRLAPLE
DGCFNEWGRPVHISDGSSQSDQEIIRALRVDQVPREIIGGVGSLGFAKWVVDGIIAPVAGQGVYLSALKKQTTMPRTHFN
AAHERARAPFFGIDWIRNLAAAALSLNVRRTVYPAQGGVDVTVEPFAVEGVPKGRIKQEARHPGIAPPSTPAGAVPPRVT
QGETAAGPSRYLGYLPHAGYQTGYVRALFYYLAVMEPGHFYLGVLNEERGVPRLREYQRAAVFLPYFDRSGRFQVEVFEA
ARLSTLEEFVAQYPQQMLALVRVRAPEIGHFNP

Sequences:

>Translated_593_residues
MHLPRGLWAMGTVRSCFFPPTRAPIWGRMSCLGARARGVLRISLVIMLQGLLRASEVDEELSKKYSIEIMVDSGVSETGE
RLPLLPFERIPDSHHVRRVIAQDWFLDEPSRVALRAPRSYTDETGNSFRVEAYVIAATDHLAVRVTPLLADRAPRDGVHS
APVAAAPRLHLALEAPTGTSRAGRTGADTPQSPVTDAAPSQAVAQGTWVLYRHMHTGAPVCIRVYPRESASLYVQLSAPT
AVEMQGKTHLDVCLFNVHVRKHVALGLSFEQLYTYSLLQLRALTEHAVPWRIFDPPRTYSAVESMASIIKRRSYRLAPLE
DGCFNEWGRPVHISDGSSQSDQEIIRALRVDQVPREIIGGVGSLGFAKWVVDGIIAPVAGQGVYLSALKKQTTMPRTHFN
AAHERARAPFFGIDWIRNLAAAALSLNVRRTVYPAQGGVDVTVEPFAVEGVPKGRIKQEARHPGIAPPSTPAGAVPPRVT
QGETAAGPSRYLGYLPHAGYQTGYVRALFYYLAVMEPGHFYLGVLNEERGVPRLREYQRAAVFLPYFDRSGRFQVEVFEA
ARLSTLEEFVAQYPQQMLALVRVRAPEIGHFNP
>Mature_593_residues
MHLPRGLWAMGTVRSCFFPPTRAPIWGRMSCLGARARGVLRISLVIMLQGLLRASEVDEELSKKYSIEIMVDSGVSETGE
RLPLLPFERIPDSHHVRRVIAQDWFLDEPSRVALRAPRSYTDETGNSFRVEAYVIAATDHLAVRVTPLLADRAPRDGVHS
APVAAAPRLHLALEAPTGTSRAGRTGADTPQSPVTDAAPSQAVAQGTWVLYRHMHTGAPVCIRVYPRESASLYVQLSAPT
AVEMQGKTHLDVCLFNVHVRKHVALGLSFEQLYTYSLLQLRALTEHAVPWRIFDPPRTYSAVESMASIIKRRSYRLAPLE
DGCFNEWGRPVHISDGSSQSDQEIIRALRVDQVPREIIGGVGSLGFAKWVVDGIIAPVAGQGVYLSALKKQTTMPRTHFN
AAHERARAPFFGIDWIRNLAAAALSLNVRRTVYPAQGGVDVTVEPFAVEGVPKGRIKQEARHPGIAPPSTPAGAVPPRVT
QGETAAGPSRYLGYLPHAGYQTGYVRALFYYLAVMEPGHFYLGVLNEERGVPRLREYQRAAVFLPYFDRSGRFQVEVFEA
ARLSTLEEFVAQYPQQMLALVRVRAPEIGHFNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65568; Mature: 65568

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLPRGLWAMGTVRSCFFPPTRAPIWGRMSCLGARARGVLRISLVIMLQGLLRASEVDEE
CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSKKYSIEIMVDSGVSETGERLPLLPFERIPDSHHVRRVIAQDWFLDEPSRVALRAPRSY
HHCCEEEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCC
TDETGNSFRVEAYVIAATDHLAVRVTPLLADRAPRDGVHSAPVAAAPRLHLALEAPTGTS
CCCCCCEEEEEEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
RAGRTGADTPQSPVTDAAPSQAVAQGTWVLYRHMHTGAPVCIRVYPRESASLYVQLSAPT
CCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCC
AVEMQGKTHLDVCLFNVHVRKHVALGLSFEQLYTYSLLQLRALTEHAVPWRIFDPPRTYS
EEEECCCCEEEEEEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
AVESMASIIKRRSYRLAPLEDGCFNEWGRPVHISDGSSQSDQEIIRALRVDQVPREIIGG
HHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHCC
VGSLGFAKWVVDGIIAPVAGQGVYLSALKKQTTMPRTHFNAAHERARAPFFGIDWIRNLA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEECHHHHHHHH
AAALSLNVRRTVYPAQGGVDVTVEPFAVEGVPKGRIKQEARHPGIAPPSTPAGAVPPRVT
HHHHHCCEEEEEECCCCCEEEEECCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
QGETAAGPSRYLGYLPHAGYQTGYVRALFYYLAVMEPGHFYLGVLNEERGVPRLREYQRA
CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCHH
AVFLPYFDRSGRFQVEVFEAARLSTLEEFVAQYPQQMLALVRVRAPEIGHFNP
EEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHLPRGLWAMGTVRSCFFPPTRAPIWGRMSCLGARARGVLRISLVIMLQGLLRASEVDEE
CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSKKYSIEIMVDSGVSETGERLPLLPFERIPDSHHVRRVIAQDWFLDEPSRVALRAPRSY
HHCCEEEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCC
TDETGNSFRVEAYVIAATDHLAVRVTPLLADRAPRDGVHSAPVAAAPRLHLALEAPTGTS
CCCCCCEEEEEEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
RAGRTGADTPQSPVTDAAPSQAVAQGTWVLYRHMHTGAPVCIRVYPRESASLYVQLSAPT
CCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCC
AVEMQGKTHLDVCLFNVHVRKHVALGLSFEQLYTYSLLQLRALTEHAVPWRIFDPPRTYS
EEEECCCCEEEEEEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
AVESMASIIKRRSYRLAPLEDGCFNEWGRPVHISDGSSQSDQEIIRALRVDQVPREIIGG
HHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHCC
VGSLGFAKWVVDGIIAPVAGQGVYLSALKKQTTMPRTHFNAAHERARAPFFGIDWIRNLA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEECHHHHHHHH
AAALSLNVRRTVYPAQGGVDVTVEPFAVEGVPKGRIKQEARHPGIAPPSTPAGAVPPRVT
HHHHHCCEEEEEECCCCCEEEEECCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
QGETAAGPSRYLGYLPHAGYQTGYVRALFYYLAVMEPGHFYLGVLNEERGVPRLREYQRA
CCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCHH
AVFLPYFDRSGRFQVEVFEAARLSTLEEFVAQYPQQMLALVRVRAPEIGHFNP
EEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA