| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025602
Identifier: 189025602
GI number: 189025602
Start: 393951
End: 395501
Strand: Direct
Name: 189025602
Synonym: TPASS_0369
Alternate gene names: NA
Gene position: 393951-395501 (Clockwise)
Preceding gene: 189025601
Following gene: 189025604
Centisome position: 34.57
GC content: 59.06
Gene sequence:
>1551_bases GTGAGTGTGTGGGTGGCGCTCGCCTTGCTGGGAATGTGTGTTTCGTGTACGCACGTGCCTCCGCCTCGTGCCCTCATCGT TTCAAAGGAGCCGCCTCCAGCGTTGGATTCTGCGCCGCGCCCTGCGATTCCAGAAGCAGTTCCTCTTCCGTCCCCTGTGG AGGAAGAAATCGCCGGTCGCCTCCCTCCTGCACCTGCCGCTGCACCTGAGCGCGTTCCTGAGTCCTCACAGGAGCGGGAA CAGAAACCTGAGTCTTCGAAGCCTCAGGTGGTAGAGCCGGTGTCGCTTGCCTCTCCGGTGAAGCCTCGCGAGGCTGGGAG TGTACCTGATGTTCTTCCAGTACCTGAAGTGTCGTCGCCGCACGTTGCGCCGCCGGCACCCCCTGCGCCGACAGCTCCCC GGCCGCATCGTCCCTCCCCTCCGCCTGTATCGCCTTCTGCATCCAAACCAAAGCAGCGCGCTGTACCTCCTTCTCCGCCC CCTGCATCAGAGCCTCCTCGTGAGGCGGAGGTGCAGGCTGAGCCTGAGCCGGCAGAGGATTCTCCACGCGCGATGGTGCC TGAAGAACCGCCTGAGGATGAGGTGCCGCGCGTTTCGCGCGCGGTACAGCTTGCAGTGGGGCAAAAACTTGAGGTTTTGT ATCCGGGCGAAGGTTGGGTGTACGTGGGCGAGCATACTGCGCAGCCTGGTTTGCGCTATCACCAGCGCAAGTTGGAGGAG TCGCATTCGCTTTTTACCTTTAGTGCTGAGCGAGAGGGTGATTTTGTCTTAGCGTTCTCCTATTTTGATGTGTTTCGGGG TGATTTTGTCTCCGACGCACTTGCGGTCAAGGTGGTACCGAAGCGGGAAGGGCTCGCGCGTGTGGTGCGTGCGCCTGAGT ACCGGCGTACGGTGTCGTCTCCTCCTGATACTGTCGTTTCTGAGTTATCTCCTGCGGGAACGGGTACCGAGCGCAGAGCA GAAGAGAGTGGAACTTCTGGTTCTCAGCGCGCCGCTGCCCATACTGGAGCGCCTGTCCGGCAGGATCAGACGGATACTGC TGTTGCAGAGAAAGCTCAGCACGGTACGCCCCGTCCTGATGAAAAAAAAGATCGGGAACCCACCGTAGGAGGACGTGACC CTGTGCCGTCGGATGCAGTAGCACAGGGTGTGTCGGAGCGGTACTCTCCGCGGAAGATTTCACCAGCGTCTCAACCTTCT GCTCCCTCAGCTGCGCCTATTGAGGCGCATGTCCCGGCATCTGCTCACAAAGAGGGTCAAGAAAAACGCGATCACCTAGC AGAAGCGCGCCAGTTTTGTGCACAGGGAAACGCGCGAGATGCCCTCGCTTCGCTCGGCGATTTCTTTGCGCAGTTCCCTT CTCACGAACGAATGGACGAAGCGTGGTTCCTGCGTGGACAAGCCTATGAGATCAACGGCGCACAGAGAAACGTACGCCTC GCGCTCGAAGCATACAAGACAATACTGGAACGCTTCCCCCACAGCCCATACTGGAAAAAGGCAGACGAACGCGCACGCTT TATCAAAAACTTTTTTATTAAGATTTCTTAG
Upstream 100 bases:
>100_bases AGGAGTGCCTCCGACAGCTTGAGTATCCGACGGAAAAGGCGGTGCAGGCATTAGAGCACGCAAACGAGAAACGTATACAG CAGATGCTAGAGGCAGTACC
Downstream 100 bases:
>100_bases CAGTCTCGCATCACAGGCAACAGGAATGCGATCATGTCGCCTCGACAACCACACCCGCGCGTGCGTCCTATTCGTCAAAG TCTAGGTCATTGTCCTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGRLPPAPAAAPERVPESSQERE QKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPP PASEPPREAEVQAEPEPAEDSPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSSPPDTVVSELSPAGTGTERRA EESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPDEKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPS APSAAPIEAHVPASAHKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS
Sequences:
>Translated_516_residues MSVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGRLPPAPAAAPERVPESSQERE QKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPP PASEPPREAEVQAEPEPAEDSPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSSPPDTVVSELSPAGTGTERRA EESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPDEKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPS APSAAPIEAHVPASAHKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS >Mature_515_residues SVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGRLPPAPAAAPERVPESSQEREQ KPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPPP ASEPPREAEVQAEPEPAEDSPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEES HSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSSPPDTVVSELSPAGTGTERRAE ESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPDEKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPSA PSAAPIEAHVPASAHKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRLA LEAYKTILERFPHSPYWKKADERARFIKNFFIKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y369_TREPA (O83384)
Other databases:
- EMBL: AE000520 - PIR: H71332 - RefSeq: NP_218809.1 - ProteinModelPortal: O83384 - GeneID: 2611636 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0369 - NMPDR: fig|243276.1.peg.368 - TIGR: TP_0369 - HOGENOM: HBG731984 - OMA: PSEVESP - ProtClustDB: CLSK491130 - BioCyc: TPAL243276:TP_0369-MONOMER - GO: GO:0005488 - InterPro: IPR011990 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55860; Mature: 55729
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGR CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC LPPAPAAAPERVPESSQEREQKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSP CCCCCCCCHHHCCCCHHHHHHCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC HVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPPPASEPPREAEVQAEPEPAED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHH SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSS HCCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCHHHHHCCC PPDTVVSELSPAGTGTERRAEESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPD CHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC EKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPSAPSAAPIEAHVPASAHKEGQ CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH EKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEECCCEEEECCCCCHHHH ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGR HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC LPPAPAAAPERVPESSQEREQKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSP CCCCCCCCHHHCCCCHHHHHHCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC HVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPPPASEPPREAEVQAEPEPAED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHH SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSS HCCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCHHHHHCCC PPDTVVSELSPAGTGTERRAEESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPD CHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC EKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPSAPSAAPIEAHVPASAHKEGQ CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH EKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEECCCEEEECCCCCHHHH ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876