Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

Click here to switch to the map view.

The map label for this gene is 189025567

Identifier: 189025567

GI number: 189025567

Start: 357554

End: 358771

Strand: Direct

Name: 189025567

Synonym: TPASS_0334

Alternate gene names: NA

Gene position: 357554-358771 (Clockwise)

Preceding gene: 189025566

Following gene: 189025569

Centisome position: 31.38

GC content: 55.5

Gene sequence:

>1218_bases
ATGCCAGATATTGGAGAGCTGCTAAAGACGACGCGCGAACGCAAACACCTCAGTCTCGAACAGGCTGCGCACGAGACGAG
TATCGCACGCCGTTACCTGGAGGCGCTCGAGAACGATGAGTATGATGTTTTTCCCGGCGAACCCTACATCCTTGGCTTTT
TGCGCAATTACTGCGAGTACCTCCAGCTGGATACGGAGCAGTGCATCGCTCGCTATAAACATTTAAAAATTCAAGAAATG
TCGCTGCCAACGGAGACCCTCCTACCGAGTAAACGGTGGGGTTCATTTCCCCTGTTAAAGGGAGTTGCCTGTGTGCTCTT
CCTGGGTGGGGTGCTGGGTGTGTATTACGCGCGGCACCGCGCGCTGGGTTTTCTATCCCGTATTGTGTTCTTTGGCAGAG
CACAGCGTACCCCAAGGGAGCTGTCTCCCCCCGATGCAACGGGGGCGGTGCGCGAAACAGTGTCGCTGTCTTCTGCACAA
CATGAGGAGCGTGCGCGACGCACGCGTTCGAGCGCATCTCGCTATACGCTTGCTGAGGAAAAGTTTGAACACACGGTCTT
TCCAGGAGATGTGTTGGTTATCAGTTCCGGGGGGAATGCGTACGAGCTAACCGTCAGCCGCACTACGCCGCACCTGTATC
TGGACACGCCCATTGGTACACAGGTGATCTCTCTTGGTCAGCGCCTAGTGATGGATTTGAATACAGATGTGCAGCCGGAC
GTAGAAATAAGTGTGGAAGACATTGAAGCACATCAGGCGGACGGGGGCGCGCGTGTTCGCGTGTTTACAGGTAGTCTGGT
GCAGACGCTCCGTGATCGCAGTGCTCAGAGCTTTGTGCCTACAAGTGGGGTAAATGTCTCTGGTCAGACGGGAGTCGCTG
CCGGCGCGCGATATCAAGTTTTGTTTGAAGGCGGTGTTGCGTACCCGGTGACAATGAACGCAACGTTTCGCTCGTACTGT
TTGTTCCGGTACGAAGCAGATCGCACGCGGCGGGAGGAGCGGTATTACCAAAAGGGCGAGCAGCTGACGGTGCAAGCAAA
CAACGGGATTCGGGTGTGGGCATCTAACGGGAATGTGGTGCAGCTGCAAATTGTCGCAGGCGGTAAGACGGTGGATGTAG
GCCTCAGCCGTCCGGGGGAAGTGCTGGTCAAAGACATCAAATGGATCAAAGATGAGGACGCCGGGCGGTTCAAGTTCGTG
GTCATGGAAGTAGACTAG

Upstream 100 bases:

>100_bases
TATTCCAGACACACGGTTCCTCTACGATGTGCCCCCAACCGCAAATGTGGTGCACAATTTTCTCTTTGCTGATTGACCGC
TGCCCCCAAAGGACGTGACG

Downstream 100 bases:

>100_bases
CGCGCGGCGGCAGCAATCGCGTACGCGTTCCAGAGCGCGTGGACTGCAGTGCACAGTGCGCTTGCGCGCGCGCGGGAGCC
GCTTCTTTTTTTCTCTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPDIGELLKTTRERKHLSLEQAAHETSIARRYLEALENDEYDVFPGEPYILGFLRNYCEYLQLDTEQCIARYKHLKIQEM
SLPTETLLPSKRWGSFPLLKGVACVLFLGGVLGVYYARHRALGFLSRIVFFGRAQRTPRELSPPDATGAVRETVSLSSAQ
HEERARRTRSSASRYTLAEEKFEHTVFPGDVLVISSGGNAYELTVSRTTPHLYLDTPIGTQVISLGQRLVMDLNTDVQPD
VEISVEDIEAHQADGGARVRVFTGSLVQTLRDRSAQSFVPTSGVNVSGQTGVAAGARYQVLFEGGVAYPVTMNATFRSYC
LFRYEADRTRREERYYQKGEQLTVQANNGIRVWASNGNVVQLQIVAGGKTVDVGLSRPGEVLVKDIKWIKDEDAGRFKFV
VMEVD

Sequences:

>Translated_405_residues
MPDIGELLKTTRERKHLSLEQAAHETSIARRYLEALENDEYDVFPGEPYILGFLRNYCEYLQLDTEQCIARYKHLKIQEM
SLPTETLLPSKRWGSFPLLKGVACVLFLGGVLGVYYARHRALGFLSRIVFFGRAQRTPRELSPPDATGAVRETVSLSSAQ
HEERARRTRSSASRYTLAEEKFEHTVFPGDVLVISSGGNAYELTVSRTTPHLYLDTPIGTQVISLGQRLVMDLNTDVQPD
VEISVEDIEAHQADGGARVRVFTGSLVQTLRDRSAQSFVPTSGVNVSGQTGVAAGARYQVLFEGGVAYPVTMNATFRSYC
LFRYEADRTRREERYYQKGEQLTVQANNGIRVWASNGNVVQLQIVAGGKTVDVGLSRPGEVLVKDIKWIKDEDAGRFKFV
VMEVD
>Mature_404_residues
PDIGELLKTTRERKHLSLEQAAHETSIARRYLEALENDEYDVFPGEPYILGFLRNYCEYLQLDTEQCIARYKHLKIQEMS
LPTETLLPSKRWGSFPLLKGVACVLFLGGVLGVYYARHRALGFLSRIVFFGRAQRTPRELSPPDATGAVRETVSLSSAQH
EERARRTRSSASRYTLAEEKFEHTVFPGDVLVISSGGNAYELTVSRTTPHLYLDTPIGTQVISLGQRLVMDLNTDVQPDV
EISVEDIEAHQADGGARVRVFTGSLVQTLRDRSAQSFVPTSGVNVSGQTGVAAGARYQVLFEGGVAYPVTMNATFRSYCL
FRYEADRTRREERYYQKGEQLTVQANNGIRVWASNGNVVQLQIVAGGKTVDVGLSRPGEVLVKDIKWIKDEDAGRFKFVV
MEVD

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45309; Mature: 45178

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIGELLKTTRERKHLSLEQAAHETSIARRYLEALENDEYDVFPGEPYILGFLRNYCEY
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHH
LQLDTEQCIARYKHLKIQEMSLPTETLLPSKRWGSFPLLKGVACVLFLGGVLGVYYARHR
HCCCHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALGFLSRIVFFGRAQRTPRELSPPDATGAVRETVSLSSAQHEERARRTRSSASRYTLAEE
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHH
KFEHTVFPGDVLVISSGGNAYELTVSRTTPHLYLDTPIGTQVISLGQRLVMDLNTDVQPD
HHCCEECCCCEEEEECCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCC
VEISVEDIEAHQADGGARVRVFTGSLVQTLRDRSAQSFVPTSGVNVSGQTGVAAGARYQV
CEEEEEHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LFEGGVAYPVTMNATFRSYCLFRYEADRTRREERYYQKGEQLTVQANNGIRVWASNGNVV
EEECCEEEEEEECCCHHHEEEEEECCHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCEE
QLQIVAGGKTVDVGLSRPGEVLVKDIKWIKDEDAGRFKFVVMEVD
EEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
PDIGELLKTTRERKHLSLEQAAHETSIARRYLEALENDEYDVFPGEPYILGFLRNYCEY
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHH
LQLDTEQCIARYKHLKIQEMSLPTETLLPSKRWGSFPLLKGVACVLFLGGVLGVYYARHR
HCCCHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALGFLSRIVFFGRAQRTPRELSPPDATGAVRETVSLSSAQHEERARRTRSSASRYTLAEE
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHH
KFEHTVFPGDVLVISSGGNAYELTVSRTTPHLYLDTPIGTQVISLGQRLVMDLNTDVQPD
HHCCEECCCCEEEEECCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCC
VEISVEDIEAHQADGGARVRVFTGSLVQTLRDRSAQSFVPTSGVNVSGQTGVAAGARYQV
CEEEEEHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LFEGGVAYPVTMNATFRSYCLFRYEADRTRREERYYQKGEQLTVQANNGIRVWASNGNVV
EEECCEEEEEEECCCHHHEEEEEECCHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCEE
QLQIVAGGKTVDVGLSRPGEVLVKDIKWIKDEDAGRFKFVVMEVD
EEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA