| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is lldD [C]
Identifier: 189025525
GI number: 189025525
Start: 305865
End: 306746
Strand: Direct
Name: lldD [C]
Synonym: TPASS_0291
Alternate gene names: 189025525
Gene position: 305865-306746 (Clockwise)
Preceding gene: 189025524
Following gene: 189025526
Centisome position: 26.84
GC content: 50.68
Gene sequence:
>882_bases ATGGTGCGTTCTGCGCGTTCAGAGTACAAGTGTCGCCTGTGTGCCCGTTGTGATGGATACGGGTGTCGTGGTCAGTTACC AGGGATGGGGGGTGTTTTTAACAGTGCGAATTTTATCGCGAACTGCCTTGCATGGAAAAAATATGTTCCGCAAAGGCATG AACTACCGGTCGTGCGTCTTGCGCCTATGACGGGTGCAGTTGAAAACGTCGGATATCCTGACGAGGTCTCGTTTTATTAT CGGCTCATCGAAGCGGTGTCCGGAACGGGTGTCCTGTTGAGTGTGGGAGATGGTTGTCCGGACATCAAACTGCAGTCGGG TATTGCTGCGTTGCGTTCCTTCAAAAAGAAGGCTGCAGTGTTTATCAAACCGTATGTGAACAAAAAAATTTTTGAACGTA TCGAGTGGGGTCGGGACGTTGCGGAGTTTGTGGGTGTGGATATCGATGCGTACCATATTGTGACCATGAGAGATAAAGTG CAGTTAGAGAAAAAGACTCCTACGCACCTTCGTGCAGTCAGACGTTTTGCAAAACTTCCTATCGTGGTGAAAGGAATTTT TGCGCCGCGCGATGTCGAATTAGTCAGAGAGTTGAAACCGGATGTCGCTATCGTATCAAATCATGGAGGCAGGGTTGAAA CTGCGCGCGGAAGCACAGCGGACTTTCTTTTTGAATACGGTGGAGAGTTAGCGCGCTGTGCCGGTGAAGTGTGGGTAGAC GGTGGTATTCGCAGTTATGCGCATTTGTGCGCAGCACGGGAGTTGGGTGCGCAGCAGGTGCTGATAGGGCGTCCTTTTAT CACAGCTCTTCTCAAAGGAGGAAAGGGTGGGGTGCAACTTCTCGTGCGGAATATGACGGATAGGTCCGTTCGGTGTGTAT GA
Upstream 100 bases:
>100_bases TGCCGAATCTAATGATGATGCAGGTTTTGCACAGGCTTTGAAGCGCTATGGGGTGGTAGAGTAAAGAGGGCAGTGCTTTT TTAGGGAAAAGGAAGATCGC
Downstream 100 bases:
>100_bases TGGGAAGTGTGTTTTCTAGGAAGGGAATGCTGTGTGTTCTTGCAGTCTGGTGCGCGGCAAGTGCGGCGTACCCTCTGCGC TTGCGCTACAAGTTTCGTAA
Product: hypothetical protein
Products: Menaquinol 8; Pyruvate [C]
Alternate protein names: Dehydrogenase; FMN-Dependent Family Dehydrogenase; Dehydrogenase FMN-Dependent Family; Dehydrogenase FMN-Dependent; FMN-Dependent Dehydrogenase Domain Protein; L-Lactate Dehydrogenase; Oxidase Or Carboxylase; FMN-Dependent Dehydrogenase; Fmn-Dependent Alpha-Hydroxy Acid Dehydrogenase; Glycolate Oxidase
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVRSARSEYKCRLCARCDGYGCRGQLPGMGGVFNSANFIANCLAWKKYVPQRHELPVVRLAPMTGAVENVGYPDEVSFYY RLIEAVSGTGVLLSVGDGCPDIKLQSGIAALRSFKKKAAVFIKPYVNKKIFERIEWGRDVAEFVGVDIDAYHIVTMRDKV QLEKKTPTHLRAVRRFAKLPIVVKGIFAPRDVELVRELKPDVAIVSNHGGRVETARGSTADFLFEYGGELARCAGEVWVD GGIRSYAHLCAARELGAQQVLIGRPFITALLKGGKGGVQLLVRNMTDRSVRCV
Sequences:
>Translated_293_residues MVRSARSEYKCRLCARCDGYGCRGQLPGMGGVFNSANFIANCLAWKKYVPQRHELPVVRLAPMTGAVENVGYPDEVSFYY RLIEAVSGTGVLLSVGDGCPDIKLQSGIAALRSFKKKAAVFIKPYVNKKIFERIEWGRDVAEFVGVDIDAYHIVTMRDKV QLEKKTPTHLRAVRRFAKLPIVVKGIFAPRDVELVRELKPDVAIVSNHGGRVETARGSTADFLFEYGGELARCAGEVWVD GGIRSYAHLCAARELGAQQVLIGRPFITALLKGGKGGVQLLVRNMTDRSVRCV >Mature_293_residues MVRSARSEYKCRLCARCDGYGCRGQLPGMGGVFNSANFIANCLAWKKYVPQRHELPVVRLAPMTGAVENVGYPDEVSFYY RLIEAVSGTGVLLSVGDGCPDIKLQSGIAALRSFKKKAAVFIKPYVNKKIFERIEWGRDVAEFVGVDIDAYHIVTMRDKV QLEKKTPTHLRAVRRFAKLPIVVKGIFAPRDVELVRELKPDVAIVSNHGGRVETARGSTADFLFEYGGELARCAGEVWVD GGIRSYAHLCAARELGAQQVLIGRPFITALLKGGKGGVQLLVRNMTDRSVRCV
Specific function: Unknown
COG id: COG1304
COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.1.2.3 [C]
Molecular weight: Translated: 32306; Mature: 32306
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSARSEYKCRLCARCDGYGCRGQLPGMGGVFNSANFIANCLAWKKYVPQRHELPVVRL CCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE APMTGAVENVGYPDEVSFYYRLIEAVSGTGVLLSVGDGCPDIKLQSGIAALRSFKKKAAV CCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEE FIKPYVNKKIFERIEWGRDVAEFVGVDIDAYHIVTMRDKVQLEKKTPTHLRAVRRFAKLP EEEHHHCHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHCC IVVKGIFAPRDVELVRELKPDVAIVSNHGGRVETARGSTADFLFEYGGELARCAGEVWVD EEEEECCCCCHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHCCHHHHHHHHHEEC GGIRSYAHLCAARELGAQQVLIGRPFITALLKGGKGGVQLLVRNMTDRSVRCV CCHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHEECCCCCCEECC >Mature Secondary Structure MVRSARSEYKCRLCARCDGYGCRGQLPGMGGVFNSANFIANCLAWKKYVPQRHELPVVRL CCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE APMTGAVENVGYPDEVSFYYRLIEAVSGTGVLLSVGDGCPDIKLQSGIAALRSFKKKAAV CCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEE FIKPYVNKKIFERIEWGRDVAEFVGVDIDAYHIVTMRDKVQLEKKTPTHLRAVRRFAKLP EEEHHHCHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHCC IVVKGIFAPRDVELVRELKPDVAIVSNHGGRVETARGSTADFLFEYGGELARCAGEVWVD EEEEECCCCCHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHCCHHHHHHHHHEEC GGIRSYAHLCAARELGAQQVLIGRPFITALLKGGKGGVQLLVRNMTDRSVRCV CCHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN; Heme [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.4 {L-lactate}} [C]
Substrates: L-Lactate; Menaquinone 8 [C]
Specific reaction: L-Lactate + Menaquinone 8 --> Menaquinol 8 + Pyruvate [C]
General reaction: Redox reaction [C]
Inhibitor: Ethanenitronate substrate, [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA