| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025523
Identifier: 189025523
GI number: 189025523
Start: 303336
End: 304940
Strand: Direct
Name: 189025523
Synonym: TPASS_0289
Alternate gene names: NA
Gene position: 303336-304940 (Clockwise)
Preceding gene: 189025522
Following gene: 189025524
Centisome position: 26.62
GC content: 48.1
Gene sequence:
>1605_bases GTGCTTGCTCTGGATGAGGGGGGATCTGGACGTCTGAATGCGGATTACTTGATAGATGTATTTCCCGTCTTGCAAAGTCC GGGTCGAAGGTCGCTGGCCGCTCTTACGAATGTACGTGATAGTGCGTTTATCCCACTTCCAGAGACGAGAAAGGAGCAGG ATCTGCCTGTGGCAAACGGCAGATTTTTTCCTATACCTGGCGTCACCACCGTATTGGTGGTGTATGGGGCAGAAGATACA CACGGCCGCGCGCGTTCGTGTGCTGAGCGGATAGCTGCATTAGGTTTTGACACCTCAGTGGTAGTTCCTGGTGAAGCGTC TGAACGGACGGACGGTAAGGTGCACATATACCCTTCTTTGCCTCATTTGAAAGAGCATCTCCACCGCTGGGACGTGGTAG TTACCCATTTTGGTTTTACCGCATTTGAGGCTGCAGCTGCAGGGGCGGCGGTGTTGCTTGTTTCACCAACGCCCTATCAT TTTTTACTCTCGAGTGCAGTGGGTTTTTCTGTTATTCGATCTGCTGATCCTGCTGCGCATGAGTTGTGGTCTCAGATGCA GCAGGGAATTATTATACCCGATGTTGTGACGCGACATTCGCAGTGTCGTGATCTGGCAGATGAAATCATGCGCGTTGCGC GGGGGAAAAAACACTGCTGTCCTTTTTGTGGAGAAATGGTAGCGGTGGATGTTGTCGGTCGTGCATTACATAAAACCTTT CAGCGCTGTAATGAATGCGATATGATTTTTCTCTCCTTTGTAATTTCAGATCCAGTTCGATACTCCGAGTCATATTTTTT TGAAGAATACAAGGCACAGTATGGCAAGACTTACCTTGAGGACTTTGACCAAATTCGAATGCATGGTGCGCGCAGGATGG AGGAGATCGAACGCTTATATGCAGAAGTTTTTTGTGCAGATGAAGGTAATTCGTTTGCAGTTGATAAAAAGGTTTTAGAT GTTGGCTGTGCATATGGCGCTTTCTTGTCTGCGGCAAAGGCTGCGGGGTGGAATGCTGTTGGGGTTGATGTCTGTGAATT TGCGGTGCGTCATGTGCGAGACACACTCTGCATTCCTGCTTGTGTTGCAACGTTTCCATTACTTCCTGAGTGTTTTGACT TTGTGATTCGGCACAGCTTTGCCACGAATCGTCCCCAACAAGTATCTGTTTACATTCGAGAGTGTACGTTCTCCGCCGTT ACCCTGTGGTTTGTGATAGAGCATTTTCAGGACCTGGAGGCGGTACTCAGGAAGGTGGCAGATCTTTTAGTGCCTGGAGG TATTCTTGCCTTTTCTACCCCTAATTTTGCAGGTGTCACTGGTATGCGTTTTCCGCATCTTTTTTTTGCGCAGAGTCCTT GCGATCATTTTACAATATGGGATGCGCGCACGGTAAAAAAGCAGCTCTTGCGCTACGGTTTTACGGTAAAGAAAATAGTG GTGACTGGTCATCATCCCGAGCGATTTTATCCTCACAAGCATTTAAAATCTGGTGGGTTGAAATGGAAGATGCTGATGGC ATTGAGCAAATGGTTCCAATTAGGAGACACTATGGAGGTGTACGCGATAAAGCAAGGAGACGCGCATGGATCTGCGAGTA AGTGA
Upstream 100 bases:
>100_bases CTGATAGTGGACACGGTTCCTGCGGATGCATCACTGATAGTGGTCGACAACTTCCGTACTTGCTACGTGCGAGATTGAAT TACTTCAGCGTACTGCACCA
Downstream 100 bases:
>100_bases AGTTGCCGTGTTGTTTTTTGGGTGTGCACTTGTTCAAGTTCAGAGGTGATGTTGATGTCAGGCGCACAGGTTAGGTTGGT GGTTACCGATATGGACGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Cytidyltransferase-Like Protein; 3-Demethylubiquinone-9 3-Methyltransferase
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANGRFFPIPGVTTVLVVYGAEDT HGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSLPHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYH FLLSSAVGFSVIRSADPAAHELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLYAEVFCADEGNSFAVDKKVLD VGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPACVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAV TLWFVIEHFQDLEAVLRKVADLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK
Sequences:
>Translated_534_residues MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANGRFFPIPGVTTVLVVYGAEDT HGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSLPHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYH FLLSSAVGFSVIRSADPAAHELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLYAEVFCADEGNSFAVDKKVLD VGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPACVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAV TLWFVIEHFQDLEAVLRKVADLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK >Mature_534_residues MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANGRFFPIPGVTTVLVVYGAEDT HGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSLPHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYH FLLSSAVGFSVIRSADPAAHELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLYAEVFCADEGNSFAVDKKVLD VGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPACVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAV TLWFVIEHFQDLEAVLRKVADLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59552; Mature: 59552
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANG CCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RFFPIPGVTTVLVVYGAEDTHGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSL EEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCC PHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYHFLLSSAVGFSVIRSADPAAH HHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH ELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF HHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLY HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH AEVFCADEGNSFAVDKKVLDVGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPA HHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH CVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAVTLWFVIEHFQDLEAVLRKVA HHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV HHHCCCCEEEECCCCCCCCCCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHCCEEEEEE VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK EECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANG CCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RFFPIPGVTTVLVVYGAEDTHGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSL EEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCC PHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYHFLLSSAVGFSVIRSADPAAH HHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH ELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF HHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLY HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH AEVFCADEGNSFAVDKKVLDVGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPA HHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH CVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAVTLWFVIEHFQDLEAVLRKVA HHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV HHHCCCCEEEECCCCCCCCCCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHCCEEEEEE VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK EECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA