Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025523

Identifier: 189025523

GI number: 189025523

Start: 303336

End: 304940

Strand: Direct

Name: 189025523

Synonym: TPASS_0289

Alternate gene names: NA

Gene position: 303336-304940 (Clockwise)

Preceding gene: 189025522

Following gene: 189025524

Centisome position: 26.62

GC content: 48.1

Gene sequence:

>1605_bases
GTGCTTGCTCTGGATGAGGGGGGATCTGGACGTCTGAATGCGGATTACTTGATAGATGTATTTCCCGTCTTGCAAAGTCC
GGGTCGAAGGTCGCTGGCCGCTCTTACGAATGTACGTGATAGTGCGTTTATCCCACTTCCAGAGACGAGAAAGGAGCAGG
ATCTGCCTGTGGCAAACGGCAGATTTTTTCCTATACCTGGCGTCACCACCGTATTGGTGGTGTATGGGGCAGAAGATACA
CACGGCCGCGCGCGTTCGTGTGCTGAGCGGATAGCTGCATTAGGTTTTGACACCTCAGTGGTAGTTCCTGGTGAAGCGTC
TGAACGGACGGACGGTAAGGTGCACATATACCCTTCTTTGCCTCATTTGAAAGAGCATCTCCACCGCTGGGACGTGGTAG
TTACCCATTTTGGTTTTACCGCATTTGAGGCTGCAGCTGCAGGGGCGGCGGTGTTGCTTGTTTCACCAACGCCCTATCAT
TTTTTACTCTCGAGTGCAGTGGGTTTTTCTGTTATTCGATCTGCTGATCCTGCTGCGCATGAGTTGTGGTCTCAGATGCA
GCAGGGAATTATTATACCCGATGTTGTGACGCGACATTCGCAGTGTCGTGATCTGGCAGATGAAATCATGCGCGTTGCGC
GGGGGAAAAAACACTGCTGTCCTTTTTGTGGAGAAATGGTAGCGGTGGATGTTGTCGGTCGTGCATTACATAAAACCTTT
CAGCGCTGTAATGAATGCGATATGATTTTTCTCTCCTTTGTAATTTCAGATCCAGTTCGATACTCCGAGTCATATTTTTT
TGAAGAATACAAGGCACAGTATGGCAAGACTTACCTTGAGGACTTTGACCAAATTCGAATGCATGGTGCGCGCAGGATGG
AGGAGATCGAACGCTTATATGCAGAAGTTTTTTGTGCAGATGAAGGTAATTCGTTTGCAGTTGATAAAAAGGTTTTAGAT
GTTGGCTGTGCATATGGCGCTTTCTTGTCTGCGGCAAAGGCTGCGGGGTGGAATGCTGTTGGGGTTGATGTCTGTGAATT
TGCGGTGCGTCATGTGCGAGACACACTCTGCATTCCTGCTTGTGTTGCAACGTTTCCATTACTTCCTGAGTGTTTTGACT
TTGTGATTCGGCACAGCTTTGCCACGAATCGTCCCCAACAAGTATCTGTTTACATTCGAGAGTGTACGTTCTCCGCCGTT
ACCCTGTGGTTTGTGATAGAGCATTTTCAGGACCTGGAGGCGGTACTCAGGAAGGTGGCAGATCTTTTAGTGCCTGGAGG
TATTCTTGCCTTTTCTACCCCTAATTTTGCAGGTGTCACTGGTATGCGTTTTCCGCATCTTTTTTTTGCGCAGAGTCCTT
GCGATCATTTTACAATATGGGATGCGCGCACGGTAAAAAAGCAGCTCTTGCGCTACGGTTTTACGGTAAAGAAAATAGTG
GTGACTGGTCATCATCCCGAGCGATTTTATCCTCACAAGCATTTAAAATCTGGTGGGTTGAAATGGAAGATGCTGATGGC
ATTGAGCAAATGGTTCCAATTAGGAGACACTATGGAGGTGTACGCGATAAAGCAAGGAGACGCGCATGGATCTGCGAGTA
AGTGA

Upstream 100 bases:

>100_bases
CTGATAGTGGACACGGTTCCTGCGGATGCATCACTGATAGTGGTCGACAACTTCCGTACTTGCTACGTGCGAGATTGAAT
TACTTCAGCGTACTGCACCA

Downstream 100 bases:

>100_bases
AGTTGCCGTGTTGTTTTTTGGGTGTGCACTTGTTCAAGTTCAGAGGTGATGTTGATGTCAGGCGCACAGGTTAGGTTGGT
GGTTACCGATATGGACGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Cytidyltransferase-Like Protein; 3-Demethylubiquinone-9 3-Methyltransferase

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANGRFFPIPGVTTVLVVYGAEDT
HGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSLPHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYH
FLLSSAVGFSVIRSADPAAHELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF
QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLYAEVFCADEGNSFAVDKKVLD
VGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPACVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAV
TLWFVIEHFQDLEAVLRKVADLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV
VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK

Sequences:

>Translated_534_residues
MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANGRFFPIPGVTTVLVVYGAEDT
HGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSLPHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYH
FLLSSAVGFSVIRSADPAAHELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF
QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLYAEVFCADEGNSFAVDKKVLD
VGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPACVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAV
TLWFVIEHFQDLEAVLRKVADLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV
VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK
>Mature_534_residues
MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANGRFFPIPGVTTVLVVYGAEDT
HGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSLPHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYH
FLLSSAVGFSVIRSADPAAHELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF
QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLYAEVFCADEGNSFAVDKKVLD
VGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPACVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAV
TLWFVIEHFQDLEAVLRKVADLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV
VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59552; Mature: 59552

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANG
CCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RFFPIPGVTTVLVVYGAEDTHGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSL
EEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCC
PHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYHFLLSSAVGFSVIRSADPAAH
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
ELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF
HHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLY
HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AEVFCADEGNSFAVDKKVLDVGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPA
HHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
CVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAVTLWFVIEHFQDLEAVLRKVA
HHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV
HHHCCCCEEEECCCCCCCCCCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHCCEEEEEE
VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK
EECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MLALDEGGSGRLNADYLIDVFPVLQSPGRRSLAALTNVRDSAFIPLPETRKEQDLPVANG
CCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RFFPIPGVTTVLVVYGAEDTHGRARSCAERIAALGFDTSVVVPGEASERTDGKVHIYPSL
EEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCC
PHLKEHLHRWDVVVTHFGFTAFEAAAAGAAVLLVSPTPYHFLLSSAVGFSVIRSADPAAH
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
ELWSQMQQGIIIPDVVTRHSQCRDLADEIMRVARGKKHCCPFCGEMVAVDVVGRALHKTF
HHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
QRCNECDMIFLSFVISDPVRYSESYFFEEYKAQYGKTYLEDFDQIRMHGARRMEEIERLY
HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AEVFCADEGNSFAVDKKVLDVGCAYGAFLSAAKAAGWNAVGVDVCEFAVRHVRDTLCIPA
HHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
CVATFPLLPECFDFVIRHSFATNRPQQVSVYIRECTFSAVTLWFVIEHFQDLEAVLRKVA
HHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLVPGGILAFSTPNFAGVTGMRFPHLFFAQSPCDHFTIWDARTVKKQLLRYGFTVKKIV
HHHCCCCEEEECCCCCCCCCCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHCCEEEEEE
VTGHHPERFYPHKHLKSGGLKWKMLMALSKWFQLGDTMEVYAIKQGDAHGSASK
EECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA