Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025495

Identifier: 189025495

GI number: 189025495

Start: 273501

End: 274544

Strand: Direct

Name: 189025495

Synonym: TPASS_0261

Alternate gene names: NA

Gene position: 273501-274544 (Clockwise)

Preceding gene: 189025493

Following gene: 189025496

Centisome position: 24.0

GC content: 54.5

Gene sequence:

>1044_bases
GTGGGAGCCACGCTTTTTCTCGGTGTCGCGTGGAAGACGGAGGCAGACGTGCCAAAAGCCATTCAGTATAAGGCCAATTC
GGTTATCTATTTTTCAGGCGATCTTGACGATCGTGTTATGATCCTGAATAAGGGGCACGTGGCGCTTACCTTTGCGGATG
TCGAAACAGGGTCGCAGGTGACTGAGTACATTAAAACTGGTGAGTTCTTTGGGGTTAAGTCTGCGCTCGGTAATTTTCCT
CGTGAAGAGAATGCGATCACCTTGGTGGATTCGATTGTGTATGCGTTTGGGAGTCAGGAGTTTGAAGCCTTTGCTCAAAC
GAACATTCGCATTGTTATGAAGATGCTCAAGGTGTTCTCTCGCCAACTGCGGAGCGTGCATCGGCAGCTTGAGTCGCTCC
TTGACTCTCAGGAGGAGACAAATAACGAGGAGGGTTTGTACACCGTTGCCCGTGCCTTTCACGCCTCTGAGCATTACCTT
GCTGCAAGTCAGGTGGCGCAGCGTTACCGGGAACTGTATCCGGACGGAAAGCATCGGCACGATATTGCGTCGATGCTTGA
GAGCGCCGACGGTACAGTCGGGCGCGGCTTTGAGGAGGCGGGTGCGCAAGGTTCGGATGCGGGTTTTGAGGTGCCTTCTG
CTTTTGCTGAGTCAGCTGTCGATTCTGAAGTGGGGGATCTGCGTGCCGCAGAGCTTCTTGAGCAACAGGGAAAGTGGGGT
GAGGCCTATGAGCATTACCGGTTAGGGTGCGCGTCGAACGGGGGAGTGGGCGCGGAGGCTGCGTATCTGGGTGCGGGGCG
GTGTCTTTTTGAGCAGAGGGAGTTTGTGCGGAGCATTCAGACGTTCACTGAGTGCATTACCCGCAATCCGAAGTCTACGC
GTCTTGCGGAGGTGCTGATGTATCTGGGACAGTGCTATCAGGGTATGGGGAGGCCGGATAAGGCGATTTCTTTTTACGAC
AAGGCGCTTTCTACCGCTCCTGAGTCTTTAGTTCCGCGCATAAAAGAGCTCCAGCGTTCCTGTGAGGAGGCGTCGCATGG
CTGA

Upstream 100 bases:

>100_bases
AAAGGCGTGCGAACGATCTCTGCAGGTGTGCGCGCAGGAGCGCGTGACGTGAATTCTGGAAAAAGACTTAAGTGCATGAC
CGTTCTATCGAAAATGTACC

Downstream 100 bases:

>100_bases
TGCCTTTGCCTCGTTTACGCGCTTTGCCAAAAAGTTTCAGCGGGGTTCTGTTATCTTCGCAGAGTTTGATGTGGGGGAGA
GTTTCTACCTCGTGCAGAGC

Product: catabolite gene activator

Products: NA

Alternate protein names: Catabolite Gene Activator

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MGATLFLGVAWKTEADVPKAIQYKANSVIYFSGDLDDRVMILNKGHVALTFADVETGSQVTEYIKTGEFFGVKSALGNFP
REENAITLVDSIVYAFGSQEFEAFAQTNIRIVMKMLKVFSRQLRSVHRQLESLLDSQEETNNEEGLYTVARAFHASEHYL
AASQVAQRYRELYPDGKHRHDIASMLESADGTVGRGFEEAGAQGSDAGFEVPSAFAESAVDSEVGDLRAAELLEQQGKWG
EAYEHYRLGCASNGGVGAEAAYLGAGRCLFEQREFVRSIQTFTECITRNPKSTRLAEVLMYLGQCYQGMGRPDKAISFYD
KALSTAPESLVPRIKELQRSCEEASHG

Sequences:

>Translated_347_residues
MGATLFLGVAWKTEADVPKAIQYKANSVIYFSGDLDDRVMILNKGHVALTFADVETGSQVTEYIKTGEFFGVKSALGNFP
REENAITLVDSIVYAFGSQEFEAFAQTNIRIVMKMLKVFSRQLRSVHRQLESLLDSQEETNNEEGLYTVARAFHASEHYL
AASQVAQRYRELYPDGKHRHDIASMLESADGTVGRGFEEAGAQGSDAGFEVPSAFAESAVDSEVGDLRAAELLEQQGKWG
EAYEHYRLGCASNGGVGAEAAYLGAGRCLFEQREFVRSIQTFTECITRNPKSTRLAEVLMYLGQCYQGMGRPDKAISFYD
KALSTAPESLVPRIKELQRSCEEASHG
>Mature_346_residues
GATLFLGVAWKTEADVPKAIQYKANSVIYFSGDLDDRVMILNKGHVALTFADVETGSQVTEYIKTGEFFGVKSALGNFPR
EENAITLVDSIVYAFGSQEFEAFAQTNIRIVMKMLKVFSRQLRSVHRQLESLLDSQEETNNEEGLYTVARAFHASEHYLA
ASQVAQRYRELYPDGKHRHDIASMLESADGTVGRGFEEAGAQGSDAGFEVPSAFAESAVDSEVGDLRAAELLEQQGKWGE
AYEHYRLGCASNGGVGAEAAYLGAGRCLFEQREFVRSIQTFTECITRNPKSTRLAEVLMYLGQCYQGMGRPDKAISFYDK
ALSTAPESLVPRIKELQRSCEEASHG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38313; Mature: 38182

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50042 CNMP_BINDING_3 ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATLFLGVAWKTEADVPKAIQYKANSVIYFSGDLDDRVMILNKGHVALTFADVETGSQV
CCCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCHHH
TEYIKTGEFFGVKSALGNFPREENAITLVDSIVYAFGSQEFEAFAQTNIRIVMKMLKVFS
HHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RQLRSVHRQLESLLDSQEETNNEEGLYTVARAFHASEHYLAASQVAQRYRELYPDGKHRH
HHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DIASMLESADGTVGRGFEEAGAQGSDAGFEVPSAFAESAVDSEVGDLRAAELLEQQGKWG
HHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EAYEHYRLGCASNGGVGAEAAYLGAGRCLFEQREFVRSIQTFTECITRNPKSTRLAEVLM
HHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YLGQCYQGMGRPDKAISFYDKALSTAPESLVPRIKELQRSCEEASHG
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GATLFLGVAWKTEADVPKAIQYKANSVIYFSGDLDDRVMILNKGHVALTFADVETGSQV
CCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCHHH
TEYIKTGEFFGVKSALGNFPREENAITLVDSIVYAFGSQEFEAFAQTNIRIVMKMLKVFS
HHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RQLRSVHRQLESLLDSQEETNNEEGLYTVARAFHASEHYLAASQVAQRYRELYPDGKHRH
HHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DIASMLESADGTVGRGFEEAGAQGSDAGFEVPSAFAESAVDSEVGDLRAAELLEQQGKWG
HHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EAYEHYRLGCASNGGVGAEAAYLGAGRCLFEQREFVRSIQTFTECITRNPKSTRLAEVLM
HHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YLGQCYQGMGRPDKAISFYDKALSTAPESLVPRIKELQRSCEEASHG
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA