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The map label for this gene is ybaW [C]

Identifier: 189025389

GI number: 189025389

Start: 179468

End: 179872

Strand: Reverse

Name: ybaW [C]

Synonym: TPASS_0156

Alternate gene names: 189025389

Gene position: 179872-179468 (Counterclockwise)

Preceding gene: 189025390

Following gene: 189025386

Centisome position: 15.79

GC content: 51.11

Gene sequence:

>405_bases
GTGAATTTTTCGCTGGAATTCCCCGTAAGATCCTATGAGCTAGACGGATACGGACACGTGAACAATGCGGTATATCTCCA
ATATTTTGAATATGCGCGCGCCGCTTTTTTGCTCCACATAGGGTTCGACCTCAAACAGTTGCACGAAGCAGGTTACGCTT
TCTACGTAACCCAGGCGCACATTCACTACCGCACTGCAGTGCATCTATTCGATACGTTGCGCGCCCGGGTAAAACCATTA
AAGCTCGGAAAAGCTTCCGGCGTCTTTTCACAGACGCTGGAGAACCAGCATCACGTGCTATGCGCGGATGCGGAAATTAC
CTGGGTGTGCGTTTCGCGCACAAGCGGCAAACCAACTAAGATTCCCCCCGAGTATCTGGTACCTGCGCTGTATCCGAACT
ACTAG

Upstream 100 bases:

>100_bases
ACGTGGCGGCACCGTCAGAGGATAAAAAACAAATCGTAGTCGACTATGTCATGCACCTTTTGGAAGAAATGCACGAGCAC
AATGAACGAGAAAGGCTATC

Downstream 100 bases:

>100_bases
TCCTCCCTTCTTTCCCCTTTACTCTCCCAAGGACATCACACTACGGAAGGGTACGCATACGCAGTAGGGAGGTAGGGTTT
ATCGCGGAGCCATTCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Protein; Thioesterase Family Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNFSLEFPVRSYELDGYGHVNNAVYLQYFEYARAAFLLHIGFDLKQLHEAGYAFYVTQAHIHYRTAVHLFDTLRARVKPL
KLGKASGVFSQTLENQHHVLCADAEITWVCVSRTSGKPTKIPPEYLVPALYPNY

Sequences:

>Translated_134_residues
MNFSLEFPVRSYELDGYGHVNNAVYLQYFEYARAAFLLHIGFDLKQLHEAGYAFYVTQAHIHYRTAVHLFDTLRARVKPL
KLGKASGVFSQTLENQHHVLCADAEITWVCVSRTSGKPTKIPPEYLVPALYPNY
>Mature_134_residues
MNFSLEFPVRSYELDGYGHVNNAVYLQYFEYARAAFLLHIGFDLKQLHEAGYAFYVTQAHIHYRTAVHLFDTLRARVKPL
KLGKASGVFSQTLENQHHVLCADAEITWVCVSRTSGKPTKIPPEYLVPALYPNY

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15367; Mature: 15367

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSLEFPVRSYELDGYGHVNNAVYLQYFEYARAAFLLHIGFDLKQLHEAGYAFYVTQAH
CCEEECCCCEEEEECCCCCCCCEEEEHHHHHHHHEEEEEECCCHHHHHHCCEEEEEEEEE
IHYRTAVHLFDTLRARVKPLKLGKASGVFSQTLENQHHVLCADAEITWVCVSRTSGKPTK
EEHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCEEEEECCEEEEEEEECCCCCCCC
IPPEYLVPALYPNY
CCHHHCCCCCCCCC
>Mature Secondary Structure
MNFSLEFPVRSYELDGYGHVNNAVYLQYFEYARAAFLLHIGFDLKQLHEAGYAFYVTQAH
CCEEECCCCEEEEECCCCCCCCEEEEHHHHHHHHEEEEEECCCHHHHHHCCEEEEEEEEE
IHYRTAVHLFDTLRARVKPLKLGKASGVFSQTLENQHHVLCADAEITWVCVSRTSGKPTK
EEHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCEEEEECCEEEEEEEECCCCCCCC
IPPEYLVPALYPNY
CCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA