Click here to switch to the map view.

The map label for this gene is 189025357

Identifier: 189025357

GI number: 189025357

Start: 142984

End: 145554

Strand: Direct

Name: 189025357

Synonym: TPASS_0123

Alternate gene names: NA

Gene position: 142984-145554 (Clockwise)

Preceding gene: 189025355

Following gene: 189025358

Centisome position: 12.55

GC content: 48.89

Gene sequence:

>2571_bases
GTGTCTCTGTCACCGCAGGGAGCCGACATGAGCGGTGTTCTTTACCTAGGACGTTTCACTCTCTGTCTATTACCTGTCAG
TTGTTTTTCTCAAAAAGTGATGACGTGTGCCGATACCGTCAGGGGTGCGCAAGAGGTTTTTATGCTATGTATCTACGTTG
AGCTTCCCTATTACTATCAACTGACGCGCATCTTCCCTGCTGACATCGAATCGCTATGTGCGCGTATGAGAAGGTTCGCT
GTCCACAACGGTGCTGCCCTCCACGAGGCATCGTCCGTTCGTATCTTTGCATTTGAAGCACACAGTCTCGGTTCTGTATA
CGCCGCGGTACGCTGCGTGCGTGCGCTGTATCAAACACTGGACACATACGAAAAGCAGGTGAAGGAATTTCGTATCCTCA
TGGACGTTGTTGCTGACGATGCTTCTCCCTGTCTGATAGAAGATCGCTTCCATGCATACCGCAGTACGCTGATTCCTGAC
CGTGGTTTTTTTGCATCCTTTCGTGCAAAACAGCTTCTCAAGCATTACCTTGAATTTTTGCCACTGCCAGCGCTGAATAT
GTACCAGGTTAATGGTTTCCTTTCACTTTGTGCGGAAAAACCTTTTCCACAAGGGGTAACCACGCACTGCATAGTTGTGC
GTACCACTTCTTCATACATGAGTGCTCTGTGTAATTTCATGGCGCTCCATCCGTTGTCCGAAGCGGTCTACTCAACGCTA
TCTGAGGAAACGCGTGCGTTTTTTTTTCATCTGCGCGCTGCGGTGTCTTTTTTTAAAAGACGGCGGTATGATTCGTCTTT
TCCCCAATATTTAACCGATGCATTTCTTCAGTATGTGGGTCTGTACTTTAAGCTTTATTACGAAGCGGCGCCAAATGCGG
CGCCGCCGCCCATTTATGTAGACCCTTGTGCTGGACATGAGAGCCAAAAGCAGGCAGAGAAAGTACTGATCGTCAGTCCA
CATTCTCCCCTTATGCGGTTGCCTGCATCCTGCGCAGATATTGAAGCTATTCCGCAAGATCTAGCAGAAGTCATGTATAC
GCTTTCGCTTGCCTCCCGTTATATTTTCGCGGACGAAATAGAGGAATTTTTTCTGTTTTTGAAAAAACATGCTGACTTCG
TCGGTGATTTATTTGACAAAATGTTTTGTACCCAGGTGACGATGGTGCCGCACAACGCGTATGCCATTCCAGAGGATGTA
CACGACAGTCTAGAAAAGCGTGTGCGCGTGAAAATGCCTGTAATACGCGAATGTATTTCTTCCTTCCTTTGGAAGAAATA
TCAGGAAGGATCGCTTTGTGCTAGTACGGATCTGCTCAGAACTTTCCAGGAGCTTCAGTACAAATACACATCCGATTGTG
TGTTACACAGCTTGTTTCATACGTATTCTGACGTGCAGATTGCGCACCTACAGGTAGAAGAGTACACCGGCACGGATGTC
GGCGCAGTGTTAAAGGTATACCAACACACGCTGCTGGTGGGCATGCGTGAAGACGCAGAGGCCGCGTTCAGAGAAGCAAA
GGCTTGTCTGACAACACTGCAGGCGCGGCGTTTTGTGTCCGCTGAATACCGGACCTTTTCCCTCTTAGGATTTCTAACCA
TAGGTCAGAGCAAATTTGAAGACGCGTTGGTGTATTTTGGCTATGCACTCGATGATGCAGAACAGCTGCGCGACGGTGAT
TTTCTCTGTTCCGCGCTTTTTCATTTGAGTATTACCTACTTTTTGCAGCATAACTTTACCCAGGCGCGGCTTTTTCTGAG
TAAGCTATCCGATGCGATATCCACGTATTTTGAGCAGCGATGGAAAACTGTCAGTCTGTTTATGCAGGGCAGAATTTCTC
TCAGCCTCGGGGAGTATGCACAGGCGCGTCGGTGTTTTGATGAGGCTGCCGATTTTGCACTGCAGTACTTTGAACACCAA
GAACCCTTGTGCAGAGTGTGGGCTGCACATGCACGGCTACTTGCGGATAAGTCGTATGCAGCGCACGCGCTGTTTCAGGA
CATGTGTGATCAATACCCTGATGCATATCTCTTTCTTGTAGAAAGCTATGTCCGCGCAGAATGTTTTGACGATCCCACGT
TGTTTCAATCGTTTCCTGAGGAAACGACCTCTCGCGAGCCATGTGTGCCGTCCTTCTCTCTTGATACGCCGATTTACTCA
GGGTTCTCCTGCGCAGAAGATCTGGTATGGGGCAGGCAGTGTGCGTTTGCAGTGAGTGCGCAGCACAGTACGGTATTTGC
TCATTACTACCATTGCAGGGTGCATCTGCACCGTGCCGAGGATATGCAAACATTCCACCACCATAAGCAAAAACTTGAGG
CCATTGCACGTCGCGCGTTTCAAATAGGTGATCCGAGTGCTGCGTTGTTTCTGTACCTCTGCTATGATGTGTCCTACCGC
GTGCACGGCGCAGAGGCTGCTGTCACGACAGCGCACCTGAGTAGGGCGTTTAAAGTGATGCAGCGCAGCGTTGCGTATAT
GTCAGAAAATACCGTTCGCGCACAGTTCATGCAGGATAACTTTTGGAATGCAAAACTGTTTGCCGCCGCGCAGGCAAACA
AACTCATTTAA

Upstream 100 bases:

>100_bases
CGCTCCTTGGTGCGTAGCGTGCTGCACGGGTATTCCAGGCACGTATCGCCCCAGAAGTATAGCGCGCTAAAGGTAAATAA
AAAAGACCTCTTCAAACCGA

Downstream 100 bases:

>100_bases
AGCAGGGGGCACTATGGCGGTCAATTGTGGCATTATCGGTCTGCCGAATGTGGGGAAGTCGACAATTTTCTCCGCGCTCA
CTGCAAACGTCGTGGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MSLSPQGADMSGVLYLGRFTLCLLPVSCFSQKVMTCADTVRGAQEVFMLCIYVELPYYYQLTRIFPADIESLCARMRRFA
VHNGAALHEASSVRIFAFEAHSLGSVYAAVRCVRALYQTLDTYEKQVKEFRILMDVVADDASPCLIEDRFHAYRSTLIPD
RGFFASFRAKQLLKHYLEFLPLPALNMYQVNGFLSLCAEKPFPQGVTTHCIVVRTTSSYMSALCNFMALHPLSEAVYSTL
SEETRAFFFHLRAAVSFFKRRRYDSSFPQYLTDAFLQYVGLYFKLYYEAAPNAAPPPIYVDPCAGHESQKQAEKVLIVSP
HSPLMRLPASCADIEAIPQDLAEVMYTLSLASRYIFADEIEEFFLFLKKHADFVGDLFDKMFCTQVTMVPHNAYAIPEDV
HDSLEKRVRVKMPVIRECISSFLWKKYQEGSLCASTDLLRTFQELQYKYTSDCVLHSLFHTYSDVQIAHLQVEEYTGTDV
GAVLKVYQHTLLVGMREDAEAAFREAKACLTTLQARRFVSAEYRTFSLLGFLTIGQSKFEDALVYFGYALDDAEQLRDGD
FLCSALFHLSITYFLQHNFTQARLFLSKLSDAISTYFEQRWKTVSLFMQGRISLSLGEYAQARRCFDEAADFALQYFEHQ
EPLCRVWAAHARLLADKSYAAHALFQDMCDQYPDAYLFLVESYVRAECFDDPTLFQSFPEETTSREPCVPSFSLDTPIYS
GFSCAEDLVWGRQCAFAVSAQHSTVFAHYYHCRVHLHRAEDMQTFHHHKQKLEAIARRAFQIGDPSAALFLYLCYDVSYR
VHGAEAAVTTAHLSRAFKVMQRSVAYMSENTVRAQFMQDNFWNAKLFAAAQANKLI

Sequences:

>Translated_856_residues
MSLSPQGADMSGVLYLGRFTLCLLPVSCFSQKVMTCADTVRGAQEVFMLCIYVELPYYYQLTRIFPADIESLCARMRRFA
VHNGAALHEASSVRIFAFEAHSLGSVYAAVRCVRALYQTLDTYEKQVKEFRILMDVVADDASPCLIEDRFHAYRSTLIPD
RGFFASFRAKQLLKHYLEFLPLPALNMYQVNGFLSLCAEKPFPQGVTTHCIVVRTTSSYMSALCNFMALHPLSEAVYSTL
SEETRAFFFHLRAAVSFFKRRRYDSSFPQYLTDAFLQYVGLYFKLYYEAAPNAAPPPIYVDPCAGHESQKQAEKVLIVSP
HSPLMRLPASCADIEAIPQDLAEVMYTLSLASRYIFADEIEEFFLFLKKHADFVGDLFDKMFCTQVTMVPHNAYAIPEDV
HDSLEKRVRVKMPVIRECISSFLWKKYQEGSLCASTDLLRTFQELQYKYTSDCVLHSLFHTYSDVQIAHLQVEEYTGTDV
GAVLKVYQHTLLVGMREDAEAAFREAKACLTTLQARRFVSAEYRTFSLLGFLTIGQSKFEDALVYFGYALDDAEQLRDGD
FLCSALFHLSITYFLQHNFTQARLFLSKLSDAISTYFEQRWKTVSLFMQGRISLSLGEYAQARRCFDEAADFALQYFEHQ
EPLCRVWAAHARLLADKSYAAHALFQDMCDQYPDAYLFLVESYVRAECFDDPTLFQSFPEETTSREPCVPSFSLDTPIYS
GFSCAEDLVWGRQCAFAVSAQHSTVFAHYYHCRVHLHRAEDMQTFHHHKQKLEAIARRAFQIGDPSAALFLYLCYDVSYR
VHGAEAAVTTAHLSRAFKVMQRSVAYMSENTVRAQFMQDNFWNAKLFAAAQANKLI
>Mature_855_residues
SLSPQGADMSGVLYLGRFTLCLLPVSCFSQKVMTCADTVRGAQEVFMLCIYVELPYYYQLTRIFPADIESLCARMRRFAV
HNGAALHEASSVRIFAFEAHSLGSVYAAVRCVRALYQTLDTYEKQVKEFRILMDVVADDASPCLIEDRFHAYRSTLIPDR
GFFASFRAKQLLKHYLEFLPLPALNMYQVNGFLSLCAEKPFPQGVTTHCIVVRTTSSYMSALCNFMALHPLSEAVYSTLS
EETRAFFFHLRAAVSFFKRRRYDSSFPQYLTDAFLQYVGLYFKLYYEAAPNAAPPPIYVDPCAGHESQKQAEKVLIVSPH
SPLMRLPASCADIEAIPQDLAEVMYTLSLASRYIFADEIEEFFLFLKKHADFVGDLFDKMFCTQVTMVPHNAYAIPEDVH
DSLEKRVRVKMPVIRECISSFLWKKYQEGSLCASTDLLRTFQELQYKYTSDCVLHSLFHTYSDVQIAHLQVEEYTGTDVG
AVLKVYQHTLLVGMREDAEAAFREAKACLTTLQARRFVSAEYRTFSLLGFLTIGQSKFEDALVYFGYALDDAEQLRDGDF
LCSALFHLSITYFLQHNFTQARLFLSKLSDAISTYFEQRWKTVSLFMQGRISLSLGEYAQARRCFDEAADFALQYFEHQE
PLCRVWAAHARLLADKSYAAHALFQDMCDQYPDAYLFLVESYVRAECFDDPTLFQSFPEETTSREPCVPSFSLDTPIYSG
FSCAEDLVWGRQCAFAVSAQHSTVFAHYYHCRVHLHRAEDMQTFHHHKQKLEAIARRAFQIGDPSAALFLYLCYDVSYRV
HGAEAAVTTAHLSRAFKVMQRSVAYMSENTVRAQFMQDNFWNAKLFAAAQANKLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y123_TREPA (O83160)

Other databases:

- EMBL:   AE000520
- PIR:   B71364
- RefSeq:   NP_218563.1
- ProteinModelPortal:   O83160
- GeneID:   2610935
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0123
- NMPDR:   fig|243276.1.peg.122
- TIGR:   TP_0123
- HOGENOM:   HBG731904
- OMA:   LTDFINL
- ProtClustDB:   CLSK218542
- BioCyc:   TPAL243276:TP_0123-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97895; Mature: 97764

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSPQGADMSGVLYLGRFTLCLLPVSCFSQKVMTCADTVRGAQEVFMLCIYVELPYYYQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LTRIFPADIESLCARMRRFAVHNGAALHEASSVRIFAFEAHSLGSVYAAVRCVRALYQTL
HHHHCHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
DTYEKQVKEFRILMDVVADDASPCLIEDRFHAYRSTLIPDRGFFASFRAKQLLKHYLEFL
HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
PLPALNMYQVNGFLSLCAEKPFPQGVTTHCIVVRTTSSYMSALCNFMALHPLSEAVYSTL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SEETRAFFFHLRAAVSFFKRRRYDSSFPQYLTDAFLQYVGLYFKLYYEAAPNAAPPPIYV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
DPCAGHESQKQAEKVLIVSPHSPLMRLPASCADIEAIPQDLAEVMYTLSLASRYIFADEI
CCCCCCCCHHHHCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEFFLFLKKHADFVGDLFDKMFCTQVTMVPHNAYAIPEDVHDSLEKRVRVKMPVIRECIS
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
SFLWKKYQEGSLCASTDLLRTFQELQYKYTSDCVLHSLFHTYSDVQIAHLQVEEYTGTDV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCH
GAVLKVYQHTLLVGMREDAEAAFREAKACLTTLQARRFVSAEYRTFSLLGFLTIGQSKFE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DALVYFGYALDDAEQLRDGDFLCSALFHLSITYFLQHNFTQARLFLSKLSDAISTYFEQR
HHHHHEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WKTVSLFMQGRISLSLGEYAQARRCFDEAADFALQYFEHQEPLCRVWAAHARLLADKSYA
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
AHALFQDMCDQYPDAYLFLVESYVRAECFDDPTLFQSFPEETTSREPCVPSFSLDTPIYS
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCC
GFSCAEDLVWGRQCAFAVSAQHSTVFAHYYHCRVHLHRAEDMQTFHHHKQKLEAIARRAF
CCHHHHHHHHHHHHHEEEECCCCEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
QIGDPSAALFLYLCYDVSYRVHGAEAAVTTAHLSRAFKVMQRSVAYMSENTVRAQFMQDN
HCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
FWNAKLFAAAQANKLI
CCCCCEEEECCCCCCC
>Mature Secondary Structure 
SLSPQGADMSGVLYLGRFTLCLLPVSCFSQKVMTCADTVRGAQEVFMLCIYVELPYYYQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LTRIFPADIESLCARMRRFAVHNGAALHEASSVRIFAFEAHSLGSVYAAVRCVRALYQTL
HHHHCHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
DTYEKQVKEFRILMDVVADDASPCLIEDRFHAYRSTLIPDRGFFASFRAKQLLKHYLEFL
HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
PLPALNMYQVNGFLSLCAEKPFPQGVTTHCIVVRTTSSYMSALCNFMALHPLSEAVYSTL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SEETRAFFFHLRAAVSFFKRRRYDSSFPQYLTDAFLQYVGLYFKLYYEAAPNAAPPPIYV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
DPCAGHESQKQAEKVLIVSPHSPLMRLPASCADIEAIPQDLAEVMYTLSLASRYIFADEI
CCCCCCCCHHHHCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEFFLFLKKHADFVGDLFDKMFCTQVTMVPHNAYAIPEDVHDSLEKRVRVKMPVIRECIS
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
SFLWKKYQEGSLCASTDLLRTFQELQYKYTSDCVLHSLFHTYSDVQIAHLQVEEYTGTDV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCH
GAVLKVYQHTLLVGMREDAEAAFREAKACLTTLQARRFVSAEYRTFSLLGFLTIGQSKFE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DALVYFGYALDDAEQLRDGDFLCSALFHLSITYFLQHNFTQARLFLSKLSDAISTYFEQR
HHHHHEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WKTVSLFMQGRISLSLGEYAQARRCFDEAADFALQYFEHQEPLCRVWAAHARLLADKSYA
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
AHALFQDMCDQYPDAYLFLVESYVRAECFDDPTLFQSFPEETTSREPCVPSFSLDTPIYS
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCC
GFSCAEDLVWGRQCAFAVSAQHSTVFAHYYHCRVHLHRAEDMQTFHHHKQKLEAIARRAF
CCHHHHHHHHHHHHHEEEECCCCEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
QIGDPSAALFLYLCYDVSYRVHGAEAAVTTAHLSRAFKVMQRSVAYMSENTVRAQFMQDN
HCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
FWNAKLFAAAQANKLI
CCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876