| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is pfk [H]
Identifier: 189025342
GI number: 189025342
Start: 122272
End: 123657
Strand: Reverse
Name: pfk [H]
Synonym: TPASS_0108
Alternate gene names: 189025342
Gene position: 123657-122272 (Counterclockwise)
Preceding gene: 189025343
Following gene: 189025341
Centisome position: 10.85
GC content: 51.08
Gene sequence:
>1386_bases ATGGCACATCTTCCTAAAGAGTACGATTTTTCTATAGAGTCATTGGGGGAAAGCAAAATTCCCTCTCCCATCTACCTGTC TCACACCCTTGGCGACTTCATTCCTAACTACGTCAGTGACAATGAGTACATCAGCCATGAACTGAGTGCGCGTCTGGGGG AGACGGTAGGGCCCTTTACTCATAAAAACTTGATGGAGCGTGCGGGCCCGCGCCAGAAGATTTTCTTCAACCCGCATCAC GTTCATGCAGGTATTGTCACCTGTGGAGGGCTCTGTCCCGGCCTCAACGATGTCATTCGCGCCATCGTCCGCTGCCTTTG GGGCCGCTATGGCGTTAAGCGCATTAGTGGTATCCGCTTTGGCTATAAGGGCCTCTTGCCCGATTACAACTTCGATATCC TGCCGCTCACCCCTGAGGTCATCGATAACTGCCACAAAACAGGTGGTTCGCTGCTAGGCACCTCGCGCGGTGGGGGGAAC CGTGTGGTTGACATCGTCGATGGTATCGAGCGGCTCAACCTGCACATTCTCTTTATCATTGGGGGGGATGGGAGTCAGAA GGGAGCAAAAGAGATTGCCGACGAAATAAAACACCGCAACCTTAAGATTTCCATCATCGGCATTCCCAAAACGGTGGACA ACGACATCTCTTTTGTTCAAAAGTCATTTGGCTTCGATACTGCTATTGTCAAAGCAACAGAGGCAGTTGCCGCAGCGCAC ATGGAGGCTCGTTCACAGATTAACGGCATTGGACTGGTCAAACTCATGGGGCGTGAGTCTGGATTCATCGCTACGTACAC GGCGATTGCGAGCCATGAGACAAACTTCGTACTCATCCCTGAAGTGAGCTTTGACCTTGACGGTCCAAATGGGCTTTTGG CTCACCTAGAGAAGCGAATCGCGCTACGTAAGCATGCGGTGCTCGTTGTAGCAGAAGGTGCGGGGCAAGACCTAATGGTA AATGCGGACGGTGTGCCCTCCGGTGATTCCCAAGGAGGTAGTTTGCGCGTGAGCAGCGGCACGGATGCGTCGGGTAACAA GCGCCTTGCGGATATCGGTTTGTTCTTAAAAGAAAAGATTGGAGTCTATTTCAAAGAAAAGCGTATACACATCAATTTAA AGTACATCGATCCGAGCTACTTGATTCGTTCCGCGGTTGCTGCGCCCATAGATTCGATTTACTGCGAACGCCTCGGTAAC AATGCGGTGCATGCGGCGATGTGCGGTAAAACGAAAATGATCATTGGCTTGGTGCACAATAAGTTTGTACACCTCCCAAT CGATGTGGTGGTGTGCCAACGCAAACACGTAAATCCTGAAGGATCGTTGTGGCGCGACGCCCTTGATGCAACAGGACAGC CGATTGTGATGAAAAATATTATCTAG
Upstream 100 bases:
>100_bases AACACCCAGGGCATCTTCGCATCTTTAATTCATATTGCATCTTTCACCCCATTGCGTTAGCCTGAGGGAGTCTCTACGCA CGCGGTACGCGGAGGACCCC
Downstream 100 bases:
>100_bases GAGAGCGAAGGATGCGCTCCTCACAGCTGTGTGCAGGAAGCGAGCAGGGGGGGGGGTGCTTTTTCCCCTGTTTTTTGCGT GCTTGACGGCGGGCGAACAC
Product: diphosphate--fructose-6-phosphate 1-phosphotransferase
Products: NA
Alternate protein names: 6-phosphofructokinase, pyrophosphate dependent; PPi-dependent phosphofructokinase; PPi-PFK; Pyrophosphate-dependent 6-phosphofructose-1-kinase [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MAHLPKEYDFSIESLGESKIPSPIYLSHTLGDFIPNYVSDNEYISHELSARLGETVGPFTHKNLMERAGPRQKIFFNPHH VHAGIVTCGGLCPGLNDVIRAIVRCLWGRYGVKRISGIRFGYKGLLPDYNFDILPLTPEVIDNCHKTGGSLLGTSRGGGN RVVDIVDGIERLNLHILFIIGGDGSQKGAKEIADEIKHRNLKISIIGIPKTVDNDISFVQKSFGFDTAIVKATEAVAAAH MEARSQINGIGLVKLMGRESGFIATYTAIASHETNFVLIPEVSFDLDGPNGLLAHLEKRIALRKHAVLVVAEGAGQDLMV NADGVPSGDSQGGSLRVSSGTDASGNKRLADIGLFLKEKIGVYFKEKRIHINLKYIDPSYLIRSAVAAPIDSIYCERLGN NAVHAAMCGKTKMIIGLVHNKFVHLPIDVVVCQRKHVNPEGSLWRDALDATGQPIVMKNII
Sequences:
>Translated_461_residues MAHLPKEYDFSIESLGESKIPSPIYLSHTLGDFIPNYVSDNEYISHELSARLGETVGPFTHKNLMERAGPRQKIFFNPHH VHAGIVTCGGLCPGLNDVIRAIVRCLWGRYGVKRISGIRFGYKGLLPDYNFDILPLTPEVIDNCHKTGGSLLGTSRGGGN RVVDIVDGIERLNLHILFIIGGDGSQKGAKEIADEIKHRNLKISIIGIPKTVDNDISFVQKSFGFDTAIVKATEAVAAAH MEARSQINGIGLVKLMGRESGFIATYTAIASHETNFVLIPEVSFDLDGPNGLLAHLEKRIALRKHAVLVVAEGAGQDLMV NADGVPSGDSQGGSLRVSSGTDASGNKRLADIGLFLKEKIGVYFKEKRIHINLKYIDPSYLIRSAVAAPIDSIYCERLGN NAVHAAMCGKTKMIIGLVHNKFVHLPIDVVVCQRKHVNPEGSLWRDALDATGQPIVMKNII >Mature_460_residues AHLPKEYDFSIESLGESKIPSPIYLSHTLGDFIPNYVSDNEYISHELSARLGETVGPFTHKNLMERAGPRQKIFFNPHHV HAGIVTCGGLCPGLNDVIRAIVRCLWGRYGVKRISGIRFGYKGLLPDYNFDILPLTPEVIDNCHKTGGSLLGTSRGGGNR VVDIVDGIERLNLHILFIIGGDGSQKGAKEIADEIKHRNLKISIIGIPKTVDNDISFVQKSFGFDTAIVKATEAVAAAHM EARSQINGIGLVKLMGRESGFIATYTAIASHETNFVLIPEVSFDLDGPNGLLAHLEKRIALRKHAVLVVAEGAGQDLMVN ADGVPSGDSQGGSLRVSSGTDASGNKRLADIGLFLKEKIGVYFKEKRIHINLKYIDPSYLIRSAVAAPIDSIYCERLGNN AVHAAMCGKTKMIIGLVHNKFVHLPIDVVVCQRKHVNPEGSLWRDALDATGQPIVMKNII
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI266453619, Length=368, Percent_Identity=24.7282608695652, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI266453768, Length=368, Percent_Identity=24.7282608695652, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI266453748, Length=368, Percent_Identity=24.7282608695652, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI4505749, Length=368, Percent_Identity=24.7282608695652, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI11321601, Length=253, Percent_Identity=25.6916996047431, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790350, Length=346, Percent_Identity=26.0115606936416, Blast_Score=88, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17558788, Length=375, Percent_Identity=27.4666666666667, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25147584, Length=258, Percent_Identity=27.1317829457364, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321679, Length=286, Percent_Identity=25.8741258741259, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI17647809, Length=253, Percent_Identity=27.6679841897233, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24652337, Length=252, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI28573326, Length=252, Percent_Identity=27.3809523809524, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012829 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.90 [H]
Molecular weight: Translated: 50163; Mature: 50031
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLPKEYDFSIESLGESKIPSPIYLSHTLGDFIPNYVSDNEYISHELSARLGETVGPFT CCCCCCCCCCCHHHCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHH HKNLMERAGPRQKIFFNPHHVHAGIVTCGGLCPGLNDVIRAIVRCLWGRYGVKRISGIRF HHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCC GYKGLLPDYNFDILPLTPEVIDNCHKTGGSLLGTSRGGGNRVVDIVDGIERLNLHILFII CCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEECCCCCCCEEEHHHHHHHCCCEEEEEEE GGDGSQKGAKEIADEIKHRNLKISIIGIPKTVDNDISFVQKSFGFDTAIVKATEAVAAAH CCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH MEARSQINGIGLVKLMGRESGFIATYTAIASHETNFVLIPEVSFDLDGPNGLLAHLEKRI HHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECEEECCCCCCHHHHHHHHHH ALRKHAVLVVAEGAGQDLMVNADGVPSGDSQGGSLRVSSGTDASGNKRLADIGLFLKEKI HHHEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC GVYFKEKRIHINLKYIDPSYLIRSAVAAPIDSIYCERLGNNAVHAAMCGKTKMIIGLVHN CEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECC KFVHLPIDVVVCQRKHVNPEGSLWRDALDATGQPIVMKNII CEEECCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCC >Mature Secondary Structure AHLPKEYDFSIESLGESKIPSPIYLSHTLGDFIPNYVSDNEYISHELSARLGETVGPFT CCCCCCCCCCHHHCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHH HKNLMERAGPRQKIFFNPHHVHAGIVTCGGLCPGLNDVIRAIVRCLWGRYGVKRISGIRF HHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCC GYKGLLPDYNFDILPLTPEVIDNCHKTGGSLLGTSRGGGNRVVDIVDGIERLNLHILFII CCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEECCCCCCCEEEHHHHHHHCCCEEEEEEE GGDGSQKGAKEIADEIKHRNLKISIIGIPKTVDNDISFVQKSFGFDTAIVKATEAVAAAH CCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH MEARSQINGIGLVKLMGRESGFIATYTAIASHETNFVLIPEVSFDLDGPNGLLAHLEKRI HHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECEEECCCCCCHHHHHHHHHH ALRKHAVLVVAEGAGQDLMVNADGVPSGDSQGGSLRVSSGTDASGNKRLADIGLFLKEKI HHHEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC GVYFKEKRIHINLKYIDPSYLIRSAVAAPIDSIYCERLGNNAVHAAMCGKTKMIIGLVHN CEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECC KFVHLPIDVVVCQRKHVNPEGSLWRDALDATGQPIVMKNII CEEECCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10913106 [H]