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The map label for this gene is ndhS [H]

Identifier: 189025314

GI number: 189025314

Start: 89257

End: 89724

Strand: Direct

Name: ndhS [H]

Synonym: TPASS_0080

Alternate gene names: 189025314

Gene position: 89257-89724 (Clockwise)

Preceding gene: 189025313

Following gene: 189025315

Centisome position: 7.83

GC content: 42.95

Gene sequence:

>468_bases
ATGAATATTCGCTTTACGTTGAATACAGAACAGGTACATGTGGATGCTATGCCTCATGAGCGTCTTTCGACCGTTTTACG
GAGATGTTTTCATCTTCCTTCGATAAAAGGTTCACACGGACATGGAGAGAATGGCGCGTCTACCATTTTGTTTAATGGGG
AGGCAGTATCCGCGTATATCATACCCTTTTTTCTTGCGCACGAAACACAGATAGTTACACTTGATTTTTTTCAAAAGACT
AAAAGAGGACGGTGGATTGTTGCGTGCTTTGCGCAGCATCATATTTCTTTTTGTGGGTATTGCGATGCAGGAAAAATTCT
CACCGCAGAGAGCTTATTACAAAGGAATTCTGTGCCCAACGAAGAAGAGGTAAGACACGCCTTTTCAGGCATGCAATGCC
GGTGTACTGATATCAATGCGTTGATTCGAGCACTTCAACGTATGCCTGCTTGTCATGAGTTTTCCTAA

Upstream 100 bases:

>100_bases
GGCAAATTTTGCCGATTTCTCAAAACGCTACCCATAAGGTTCCTTTTGTTGCGCGGGATATTTTTTATGAGATGTTTTCC
CTCAGTGCAGACGATTCTCT

Downstream 100 bases:

>100_bases
AACTGTATGCATCTGTATAAGAACTCAGAATCAAGTGTTATTTATTACGTAAAAAGTTTGGGTCAATTGTGTGCGGTACT
ACGTAACGTCGCGCAGGTAC

Product: quinoline 2-oxidoreductase

Products: NA

Alternate protein names: NDH; Nicotinic acid hydroxylase small FeS subunit; NAH [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNIRFTLNTEQVHVDAMPHERLSTVLRRCFHLPSIKGSHGHGENGASTILFNGEAVSAYIIPFFLAHETQIVTLDFFQKT
KRGRWIVACFAQHHISFCGYCDAGKILTAESLLQRNSVPNEEEVRHAFSGMQCRCTDINALIRALQRMPACHEFS

Sequences:

>Translated_155_residues
MNIRFTLNTEQVHVDAMPHERLSTVLRRCFHLPSIKGSHGHGENGASTILFNGEAVSAYIIPFFLAHETQIVTLDFFQKT
KRGRWIVACFAQHHISFCGYCDAGKILTAESLLQRNSVPNEEEVRHAFSGMQCRCTDINALIRALQRMPACHEFS
>Mature_155_residues
MNIRFTLNTEQVHVDAMPHERLSTVLRRCFHLPSIKGSHGHGENGASTILFNGEAVSAYIIPFFLAHETQIVTLDFFQKT
KRGRWIVACFAQHHISFCGYCDAGKILTAESLLQRNSVPNEEEVRHAFSGMQCRCTDINALIRALQRMPACHEFS

Specific function: Catalyzes the hydroxylation of nicotinate to 6- hydroxynicotinate. Also active against 2-pyrazinecarboxylic acid, but inactive against other nicotinate analogs [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: =1.17.1.5 [H]

Molecular weight: Translated: 17545; Mature: 17545

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRFTLNTEQVHVDAMPHERLSTVLRRCFHLPSIKGSHGHGENGASTILFNGEAVSAYI
CCEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEHHH
IPFFLAHETQIVTLDFFQKTKRGRWIVACFAQHHISFCGYCDAGKILTAESLLQRNSVPN
HHHHHCCCCEEEEEEHHHHCCCCCEEEEEEHHHCCCEEEECCCCCEEHHHHHHHHCCCCC
EEEVRHAFSGMQCRCTDINALIRALQRMPACHEFS
HHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNIRFTLNTEQVHVDAMPHERLSTVLRRCFHLPSIKGSHGHGENGASTILFNGEAVSAYI
CCEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEHHH
IPFFLAHETQIVTLDFFQKTKRGRWIVACFAQHHISFCGYCDAGKILTAESLLQRNSVPN
HHHHHCCCCEEEEEEHHHHCCCCCEEEEEEHHHCCCEEEECCCCCEEHHHHHHHHCCCCC
EEEVRHAFSGMQCRCTDINALIRALQRMPACHEFS
HHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA