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The map label for this gene is y4oQ [C]

Identifier: 189025309

GI number: 189025309

Start: 82459

End: 83349

Strand: Direct

Name: y4oQ [C]

Synonym: TPASS_0075

Alternate gene names: 189025309

Gene position: 82459-83349 (Clockwise)

Preceding gene: 189025308

Following gene: 189025310

Centisome position: 7.24

GC content: 49.38

Gene sequence:

>891_bases
GTGGGGAAGAGTATGAGCAAACCACGTGATACCGTAAGCGCGTATTGTTTTAGCGCTCCAGCGCTTGTATTGCTGATGTT
CGTGCTGGTGTTGCCGGCCTTTTTGGGGCTCCGTATGAGTTTTTTTCAGTGGCAACTGAGCGCGTTGCGCACGCAACCTG
TATTTGTGGGTTTTGAAAATTACCGGGAGCTTTTCTCCAGTATTCACTTTTGGGCCAGTGTAAGAACGACGCTTGTCTTT
ACGCTCTCAGTGGTGGTGCTTGAGGTTGTACTTGGACTTGCACTCGCGCTGGTGTTGGAACACGGAGTACCCGGGTTGCG
TTTTTTTCGTACAGTGTTTGTGTTGCCGATGATGATCGCTCCCGTGGTGGTGGGAGTGCTCTGGGGGTTTTTGTATCACC
CACAGTTTGGTAAAATCAACTACGCCTTGCAGGCTTTTGAGCTTGGACCGGTATTGTGGCTTGCGAATCCGCGTCTTGCG
CTTTTGTCTGTGATACTCACTGATGTGTGGCAATGGACGCCTTTCGTATTCCTTGTGTTGCTTGCAGGTTTGCAGGGTAT
TCCGCAACATCTTTTGTATGCGGCGAAAGTGGACGGAGCAAATTATATGCAAACACTCCTGCATATAAAGATTCCACATA
TTGCGCCTGTGCTTGGCATTGCGACCGTCCTCCGTTTGATAGATTCTTTCCGTGGTTTGGTAGTGATTATGACACTGACA
AATGGTGGTCCGGGAGTTGCAACAGAAATCCTGCCGCTTCACTTGCAGCGTATTGCCTTTGAGGATCACCGTCTGGGTAA
AGCATCGGCAGTTGCTGTGCTTCTGTTTCTCCTGACAAGTCTTTTGACTTGTATTTTCATTCTCCTTACGATGAGGAGAC
AGGCGCGGTGA

Upstream 100 bases:

>100_bases
GGGAAGAGAGGGCAGAAAAGATGCTGGATATGAGCGGAAACAGAATGACGTGTTCTATCTGTGGAGCGCGTTACGTTGGG
TAGCGTAAGAGGGGGAGTGC

Downstream 100 bases:

>100_bases
GGGTTGCGTACGGGTTAGATAAGAGCAGGAGCAGATAGCATGAACATGATTTTTTTGAAGTGGCGTACCGCGTTGGTGTT
GTGTCTGTTAAGCTGTATTG

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MGKSMSKPRDTVSAYCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPVFVGFENYRELFSSIHFWASVRTTLVF
TLSVVVLEVVLGLALALVLEHGVPGLRFFRTVFVLPMMIAPVVVGVLWGFLYHPQFGKINYALQAFELGPVLWLANPRLA
LLSVILTDVWQWTPFVFLVLLAGLQGIPQHLLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLVVIMTLT
NGGPGVATEILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFILLTMRRQAR

Sequences:

>Translated_296_residues
MGKSMSKPRDTVSAYCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPVFVGFENYRELFSSIHFWASVRTTLVF
TLSVVVLEVVLGLALALVLEHGVPGLRFFRTVFVLPMMIAPVVVGVLWGFLYHPQFGKINYALQAFELGPVLWLANPRLA
LLSVILTDVWQWTPFVFLVLLAGLQGIPQHLLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLVVIMTLT
NGGPGVATEILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFILLTMRRQAR
>Mature_295_residues
GKSMSKPRDTVSAYCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPVFVGFENYRELFSSIHFWASVRTTLVFT
LSVVVLEVVLGLALALVLEHGVPGLRFFRTVFVLPMMIAPVVVGVLWGFLYHPQFGKINYALQAFELGPVLWLANPRLAL
LSVILTDVWQWTPFVFLVLLAGLQGIPQHLLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLVVIMTLTN
GGPGVATEILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFILLTMRRQAR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=266, Percent_Identity=31.203007518797, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=32.7526132404181, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=28.7937743190661, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32951; Mature: 32820

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSMSKPRDTVSAYCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPVFVGFEN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHH
YRELFSSIHFWASVRTTLVFTLSVVVLEVVLGLALALVLEHGVPGLRFFRTVFVLPMMIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
PVVVGVLWGFLYHPQFGKINYALQAFELGPVLWLANPRLALLSVILTDVWQWTPFVFLVL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LAGLQGIPQHLLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLVVIMTLT
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
NGGPGVATEILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFILLTMRRQAR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKSMSKPRDTVSAYCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPVFVGFEN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHH
YRELFSSIHFWASVRTTLVFTLSVVVLEVVLGLALALVLEHGVPGLRFFRTVFVLPMMIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
PVVVGVLWGFLYHPQFGKINYALQAFELGPVLWLANPRLALLSVILTDVWQWTPFVFLVL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LAGLQGIPQHLLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLVVIMTLT
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
NGGPGVATEILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFILLTMRRQAR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]