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The map label for this gene is oadB [H]

Identifier: 189025291

GI number: 189025291

Start: 66153

End: 67562

Strand: Direct

Name: oadB [H]

Synonym: TPASS_0057

Alternate gene names: 189025291

Gene position: 66153-67562 (Clockwise)

Preceding gene: 189025290

Following gene: 189025298

Centisome position: 5.81

GC content: 52.48

Gene sequence:

>1410_bases
ATGAATACGCGTTTACCCCTTCGAGTACTCCAGTGCGTGTTGGTGGGATTGCTTGTGTGCGGGCCCCTGTGTGCAGCTAC
GCGCCGCCCGGTACGTGCTTCTGCGCCGGTGCCTATGGTACAGAGTTGTAAAGACACGGGGGCACGATGTGCGCCGGCGT
CGTCCATGCGTGAGGACATGCGTGCGTCACACGGAGCTGCGCCGCTTCTCTCTGTAAGGAAATTTTTACTCAATACGTGG
CATAGTACCGGTCTCTACGCTTTCTTTCATGGCGTAACACAGGTGCCGGATCTTGCAAATCCGCAGCGAACACACAGCGT
GTTCGGTTATCAACAGGCGTTGCTGCTCGTGGTTGGTCTGCTCATCATTTATCTCGGTGCTGCTAAGGGCTTTGAGCCGC
TGCTGCTCATTCCTATTGGCTTTGGTACTGTCTTCGTCAACATCCCTGGTGCGGGCATGTATAGTGAGCATGGTATGCTC
AAACTCATTTACGATGCTGGGGTGGGGAATGAGTTTTTCCCTATGCTCATTTTTATGGGTATCGGTGCACTTACCGATTT
TGGACCACTGATTGCGAATCCTAAAATGGCAGTCCTTGGTGCCGCTGCCCAGTTAGGGGTGTTCCTTACTCTCTTTGGGG
TTGCAGCGTTGAACTTTGTACCCGGGATCCGCTACTCCATCCTGGATGCCTGCGCCATTGCCATTATCGGTGGGGCGGAC
GGGCCAACTTCCATCTACGTATCTGCGAAGCTTGCTCCCGAACTCATGGCCGTTATCGCGGTGGCGGCATATTCGTATAT
GGCTCTTGTACCTATTATTCAGCCTCCGCTTATGCGCCTGTTAACTACCAGAAAAGAACGTCTTATTAGGATGAAACAGC
TGCGTCCTGTTTCGCGGATAGAGAGAGTACTCTTTCCGCTTGTCTTGCTCTTGCTCTCGGTGCTGCTCATTCCTGCGGCT
TCCCCACTCATCGGTATGATCGCCTTCGGGAACTTTGTTAAGGAATGCGGTGTTGTGGAGCGGTTGTCTAAGACGATGGC
TAACGAGCTTTTGAACATCGTGTCGATCTTGCTGTCTTTGGGTGTTGGTTCTCAGATGACACCCGATAAGATTATGAACC
CCAATGCCTTGGGCATTATCGTGTTGGGACTCGTTGCCTTTTCTGTCGCAACCGCAGGGGGAGTATTCATGGCAAAGTTA
ATGAATTTGTTTTTGAGCGAGAAAATTAATCCACTTATCGGTTCCGCAGGGGTGAGTGCTGTTCCTATGGCCGCGCGTGT
TTCTAATAAGGTGGGGCTAGAGGAGGATCCTTCTAACTTCTTGCTTATGCACGCGATGGGTCCTAACGTGGCTGGTGTCA
TTGGGACCGCGATAGCCGCAGGGGTGTTCATCTCGGCCTACGGAGGGTAG

Upstream 100 bases:

>100_bases
TGAAGGCCACCGCTGCTGGTACTATCCATTTCCTAATAGCGCCTGGCGCGCATGTCAGTGCGGGGCAAGTCTTAGCAGAG
ATTCGCTAGAGGATGTGACC

Downstream 100 bases:

>100_bases
GGAGGAAGAGTAACCGCGGGGTTTTGCCGCTTAGGTACCCTTTCCTCCGTGCGCGGGCACACCCTCTCAGGTGGCTAGGG
GCTTTTGCAGACGAAGCGGG

Product: oxaloacetate decarboxylase, subunit beta

Products: NA

Alternate protein names: Carboxylyase [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNTRLPLRVLQCVLVGLLVCGPLCAATRRPVRASAPVPMVQSCKDTGARCAPASSMREDMRASHGAAPLLSVRKFLLNTW
HSTGLYAFFHGVTQVPDLANPQRTHSVFGYQQALLLVVGLLIIYLGAAKGFEPLLLIPIGFGTVFVNIPGAGMYSEHGML
KLIYDAGVGNEFFPMLIFMGIGALTDFGPLIANPKMAVLGAAAQLGVFLTLFGVAALNFVPGIRYSILDACAIAIIGGAD
GPTSIYVSAKLAPELMAVIAVAAYSYMALVPIIQPPLMRLLTTRKERLIRMKQLRPVSRIERVLFPLVLLLLSVLLIPAA
SPLIGMIAFGNFVKECGVVERLSKTMANELLNIVSILLSLGVGSQMTPDKIMNPNALGIIVLGLVAFSVATAGGVFMAKL
MNLFLSEKINPLIGSAGVSAVPMAARVSNKVGLEEDPSNFLLMHAMGPNVAGVIGTAIAAGVFISAYGG

Sequences:

>Translated_469_residues
MNTRLPLRVLQCVLVGLLVCGPLCAATRRPVRASAPVPMVQSCKDTGARCAPASSMREDMRASHGAAPLLSVRKFLLNTW
HSTGLYAFFHGVTQVPDLANPQRTHSVFGYQQALLLVVGLLIIYLGAAKGFEPLLLIPIGFGTVFVNIPGAGMYSEHGML
KLIYDAGVGNEFFPMLIFMGIGALTDFGPLIANPKMAVLGAAAQLGVFLTLFGVAALNFVPGIRYSILDACAIAIIGGAD
GPTSIYVSAKLAPELMAVIAVAAYSYMALVPIIQPPLMRLLTTRKERLIRMKQLRPVSRIERVLFPLVLLLLSVLLIPAA
SPLIGMIAFGNFVKECGVVERLSKTMANELLNIVSILLSLGVGSQMTPDKIMNPNALGIIVLGLVAFSVATAGGVFMAKL
MNLFLSEKINPLIGSAGVSAVPMAARVSNKVGLEEDPSNFLLMHAMGPNVAGVIGTAIAAGVFISAYGG
>Mature_469_residues
MNTRLPLRVLQCVLVGLLVCGPLCAATRRPVRASAPVPMVQSCKDTGARCAPASSMREDMRASHGAAPLLSVRKFLLNTW
HSTGLYAFFHGVTQVPDLANPQRTHSVFGYQQALLLVVGLLIIYLGAAKGFEPLLLIPIGFGTVFVNIPGAGMYSEHGML
KLIYDAGVGNEFFPMLIFMGIGALTDFGPLIANPKMAVLGAAAQLGVFLTLFGVAALNFVPGIRYSILDACAIAIIGGAD
GPTSIYVSAKLAPELMAVIAVAAYSYMALVPIIQPPLMRLLTTRKERLIRMKQLRPVSRIERVLFPLVLLLLSVLLIPAA
SPLIGMIAFGNFVKECGVVERLSKTMANELLNIVSILLSLGVGSQMTPDKIMNPNALGIIVLGLVAFSVATAGGVFMAKL
MNLFLSEKINPLIGSAGVSAVPMAARVSNKVGLEEDPSNFLLMHAMGPNVAGVIGTAIAAGVFISAYGG

Specific function: Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD) [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.70 [H]

Molecular weight: Translated: 49481; Mature: 49481

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRLPLRVLQCVLVGLLVCGPLCAATRRPVRASAPVPMVQSCKDTGARCAPASSMREDM
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
RASHGAAPLLSVRKFLLNTWHSTGLYAFFHGVTQVPDLANPQRTHSVFGYQQALLLVVGL
HHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LIIYLGAAKGFEPLLLIPIGFGTVFVNIPGAGMYSEHGMLKLIYDAGVGNEFFPMLIFMG
HHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
IGALTDFGPLIANPKMAVLGAAAQLGVFLTLFGVAALNFVPGIRYSILDACAIAIIGGAD
HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCC
GPTSIYVSAKLAPELMAVIAVAAYSYMALVPIIQPPLMRLLTTRKERLIRMKQLRPVSRI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHH
ERVLFPLVLLLLSVLLIPAASPLIGMIAFGNFVKECGVVERLSKTMANELLNIVSILLSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVGSQMTPDKIMNPNALGIIVLGLVAFSVATAGGVFMAKLMNLFLSEKINPLIGSAGVSA
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCH
VPMAARVSNKVGLEEDPSNFLLMHAMGPNVAGVIGTAIAAGVFISAYGG
HHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTRLPLRVLQCVLVGLLVCGPLCAATRRPVRASAPVPMVQSCKDTGARCAPASSMREDM
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
RASHGAAPLLSVRKFLLNTWHSTGLYAFFHGVTQVPDLANPQRTHSVFGYQQALLLVVGL
HHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LIIYLGAAKGFEPLLLIPIGFGTVFVNIPGAGMYSEHGMLKLIYDAGVGNEFFPMLIFMG
HHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
IGALTDFGPLIANPKMAVLGAAAQLGVFLTLFGVAALNFVPGIRYSILDACAIAIIGGAD
HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCC
GPTSIYVSAKLAPELMAVIAVAAYSYMALVPIIQPPLMRLLTTRKERLIRMKQLRPVSRI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHH
ERVLFPLVLLLLSVLLIPAASPLIGMIAFGNFVKECGVVERLSKTMANELLNIVSILLSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVGSQMTPDKIMNPNALGIIVLGLVAFSVATAGGVFMAKLMNLFLSEKINPLIGSAGVSA
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCH
VPMAARVSNKVGLEEDPSNFLLMHAMGPNVAGVIGTAIAAGVFISAYGG
HHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10027965 [H]