Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025256

Identifier: 189025256

GI number: 189025256

Start: 25325

End: 27493

Strand: Direct

Name: 189025256

Synonym: TPASS_0022

Alternate gene names: NA

Gene position: 25325-27493 (Clockwise)

Preceding gene: 189025255

Following gene: 189025257

Centisome position: 2.22

GC content: 50.02

Gene sequence:

>2169_bases
GTGCGTTCCCCGTGCAACGCTCGAGCTGCTGACAATTTTTTTTTAGAACGTGTTGCCCAGGCGGAGATAAGAACACGTCT
ACTGAATTTAGAAGAACGTCTTATTCTTTACCGCATTCCTCAGATGCCTGGTGAGGTTACACAGGCAGAAGTCGCGAGCG
TTGCGCAGAATGGTAGGGTGCGGCAAACGCCGTGTTATGGTATCAATCCTCTGTTGCAAAAAGCATTGAGTACGGTAGCT
GGACTCAATCTTTTTCTCATTCCGCAAAAGCGGATGCGTCCATCCGCACAGTTATTGACAACAGATTTGATGCTGTGCGC
ATTGTATTCGTTTTTTACGCACGGGGAAAATTTATTAAAAGTCGATGGGACGTTTAGGAAAAAGGCATTTGTTATGTTCC
AGGCATTGTTTCCTGTTGATCCGGATGTGGTGAGTGTGGCACTCCCTGCATATCTGCAGAGAGCAGGGGAGGAAAGGGGT
ACATCACGTCTTTTACAGGAAGGTCGGCGCGTCTTGGAACATCTGGGATTGATTGTCTGCGAATCAGCACAGGTGCATGT
GCAAGATAAACGGTGGGCTTCTTTTTTCTCCTTAACTGCTCTGGAACGTGCGGTGTATTTGACAGTTGCCAGTACGGCTA
TTCTGCGCAAAGAGGTGCTCGTACAGCGAGCGCAGGCTTTGCGTACACTTCTCTGTGTGTTGCACCCAGATGCGCAATAC
GCACCTGAAGATCTAACACGCGTGTATCGTATCTTGGTGGAAGAGGCAGCACCATCTGTTGCTGCTGATTTTTTCTCTTC
TTTGTCTTTGTCCAAAGATACAATGCTGCAAAAGCGTAAAGGAGCTTTACATGATTCATCGGTTTTTTCTATGCAGTCGG
CGATCACGGCTATACGCACGGCCCAGCTTTTTGGGTTGTTGTGTGTGAAAGATGGACTGTGCGCGTTGAATGAGGCTCTA
TTTAAAGGACAGTACACGCGTGGGCCAGGAATGGTCTTGTCAGCGACGGCAGAGTTAACCATTTTCCCCGATGGAGATAT
GCAAGGGGTTTTGCCAATTTTATCCTGTGCGCATGTCTGCTCACTACAAACAGTTGCCACGTTTGAGCTCAATAAAAAAA
GCTGTACCACTGGCTTTGCGCGCGGATTAACAGTGCAGGCACTTGCACAGGCTTTAGAATGTAAAACAGGTGAGCAGGTG
CCACAGAATATACTATCTTCTTTCCGGCAGTGGTATGCACAGATAACCGCGTTGACCTTAAGACGCGGCTTTGTCATGCA
GGTTGATTCATCTCAGCAAGCTTTTTTTGAATCTGGCGGGCCACTGCACCCGCTAGTGCGCACGCGTCTTGCAGAAGGAG
TGTACTTTTTTGATGAATGCCAAGAGTGTATGTTGTATCAGGCGCTCGCGCGAGCGCGTCTGTCCTACCTGTGCGAGCCA
ATTGATACAGCCACCCCGTTATTCCGCCCTGGTGAGCAGGGTGCACGTGCGCTCCATGTGCCTTCCTTTTCTTTTCCAGT
GCGGTCTGCTCGGGGAGTCTCCGAGGAATCAACGCGAGATTTTGCACATTTAGGTGCCTTTGTGTTGGAAACTCCGAACG
TTTCGTGCACGCACAGTGCTGCAGATACTCCGTCTATTTCAGAACAGACCGGTGGGGTGGCTCACGTGCAGAGCGAAGAG
GATGTAGATCCGTCCACGTCTGGTGCAACGGGTAAGTATTGGGACAAGGCACAATGGCGCAAGGTGCAACGGATGCGACG
TGCTGTGCGGCTGCAGCGGCTCAAAGAGTTTGAGGCGCACCTGCAACAACTAAAATTGGACGCAACAGAGCAGACGGAGC
TACGTGCCCGCTTGCAACGGGGGTTGATTCTGGATAGAATGCAACTTTCGTCCGAAACGATCCGCAGGGAGAGAACGGAA
GCGAGCGGGGTTGATTTTTTAGGCAAGTATCGTCTTGCAGAGTGTGCGTTACGTTCTGGTGCTTTACTTGAGATTGAGAC
TAGTTCAGGGCAGTCAGTGCATAAGATAGTGGGTACGGTGTGCGCAATTGAAAAATGCGAAGAGGATGCGTTGCTTCACG
TGTGTGTACACGCAGAACTTCCCCCTGAGCGAGTATCGATTGCGCGCGCGTCCAGGATAGTGCTACTGAAAAATTCTATT
TTTTCTTGA

Upstream 100 bases:

>100_bases
TTGTTCAACAACTTAGTGCCTTCCTGCAAAGAAAGTCTATTCAGAACGCTGTGGTGCAGATGCTTGATGAACTCGACTTG
TTATTTATTTCTGTTGTTAT

Downstream 100 bases:

>100_bases
GTCTGTTCTGAAGGGGATCCTTTTGTCTCTTGTAAAAAGGAATAGACGAGCGGGTAGGATATGAGTCGTAGGAAACAGGG
ACGAGAGTTATTCAACAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MRSPCNARAADNFFLERVAQAEIRTRLLNLEERLILYRIPQMPGEVTQAEVASVAQNGRVRQTPCYGINPLLQKALSTVA
GLNLFLIPQKRMRPSAQLLTTDLMLCALYSFFTHGENLLKVDGTFRKKAFVMFQALFPVDPDVVSVALPAYLQRAGEERG
TSRLLQEGRRVLEHLGLIVCESAQVHVQDKRWASFFSLTALERAVYLTVASTAILRKEVLVQRAQALRTLLCVLHPDAQY
APEDLTRVYRILVEEAAPSVAADFFSSLSLSKDTMLQKRKGALHDSSVFSMQSAITAIRTAQLFGLLCVKDGLCALNEAL
FKGQYTRGPGMVLSATAELTIFPDGDMQGVLPILSCAHVCSLQTVATFELNKKSCTTGFARGLTVQALAQALECKTGEQV
PQNILSSFRQWYAQITALTLRRGFVMQVDSSQQAFFESGGPLHPLVRTRLAEGVYFFDECQECMLYQALARARLSYLCEP
IDTATPLFRPGEQGARALHVPSFSFPVRSARGVSEESTRDFAHLGAFVLETPNVSCTHSAADTPSISEQTGGVAHVQSEE
DVDPSTSGATGKYWDKAQWRKVQRMRRAVRLQRLKEFEAHLQQLKLDATEQTELRARLQRGLILDRMQLSSETIRRERTE
ASGVDFLGKYRLAECALRSGALLEIETSSGQSVHKIVGTVCAIEKCEEDALLHVCVHAELPPERVSIARASRIVLLKNSI
FS

Sequences:

>Translated_722_residues
MRSPCNARAADNFFLERVAQAEIRTRLLNLEERLILYRIPQMPGEVTQAEVASVAQNGRVRQTPCYGINPLLQKALSTVA
GLNLFLIPQKRMRPSAQLLTTDLMLCALYSFFTHGENLLKVDGTFRKKAFVMFQALFPVDPDVVSVALPAYLQRAGEERG
TSRLLQEGRRVLEHLGLIVCESAQVHVQDKRWASFFSLTALERAVYLTVASTAILRKEVLVQRAQALRTLLCVLHPDAQY
APEDLTRVYRILVEEAAPSVAADFFSSLSLSKDTMLQKRKGALHDSSVFSMQSAITAIRTAQLFGLLCVKDGLCALNEAL
FKGQYTRGPGMVLSATAELTIFPDGDMQGVLPILSCAHVCSLQTVATFELNKKSCTTGFARGLTVQALAQALECKTGEQV
PQNILSSFRQWYAQITALTLRRGFVMQVDSSQQAFFESGGPLHPLVRTRLAEGVYFFDECQECMLYQALARARLSYLCEP
IDTATPLFRPGEQGARALHVPSFSFPVRSARGVSEESTRDFAHLGAFVLETPNVSCTHSAADTPSISEQTGGVAHVQSEE
DVDPSTSGATGKYWDKAQWRKVQRMRRAVRLQRLKEFEAHLQQLKLDATEQTELRARLQRGLILDRMQLSSETIRRERTE
ASGVDFLGKYRLAECALRSGALLEIETSSGQSVHKIVGTVCAIEKCEEDALLHVCVHAELPPERVSIARASRIVLLKNSI
FS
>Mature_722_residues
MRSPCNARAADNFFLERVAQAEIRTRLLNLEERLILYRIPQMPGEVTQAEVASVAQNGRVRQTPCYGINPLLQKALSTVA
GLNLFLIPQKRMRPSAQLLTTDLMLCALYSFFTHGENLLKVDGTFRKKAFVMFQALFPVDPDVVSVALPAYLQRAGEERG
TSRLLQEGRRVLEHLGLIVCESAQVHVQDKRWASFFSLTALERAVYLTVASTAILRKEVLVQRAQALRTLLCVLHPDAQY
APEDLTRVYRILVEEAAPSVAADFFSSLSLSKDTMLQKRKGALHDSSVFSMQSAITAIRTAQLFGLLCVKDGLCALNEAL
FKGQYTRGPGMVLSATAELTIFPDGDMQGVLPILSCAHVCSLQTVATFELNKKSCTTGFARGLTVQALAQALECKTGEQV
PQNILSSFRQWYAQITALTLRRGFVMQVDSSQQAFFESGGPLHPLVRTRLAEGVYFFDECQECMLYQALARARLSYLCEP
IDTATPLFRPGEQGARALHVPSFSFPVRSARGVSEESTRDFAHLGAFVLETPNVSCTHSAADTPSISEQTGGVAHVQSEE
DVDPSTSGATGKYWDKAQWRKVQRMRRAVRLQRLKEFEAHLQQLKLDATEQTELRARLQRGLILDRMQLSSETIRRERTE
ASGVDFLGKYRLAECALRSGALLEIETSSGQSVHKIVGTVCAIEKCEEDALLHVCVHAELPPERVSIARASRIVLLKNSI
FS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y022_TREPA (O83066)

Other databases:

- EMBL:   AE000520
- PIR:   B71376
- RefSeq:   NP_218462.1
- ProteinModelPortal:   O83066
- GeneID:   2610828
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0022
- NMPDR:   fig|243276.1.peg.21
- TIGR:   TP_0022
- HOGENOM:   HBG731929
- OMA:   ISIAHIS
- ProtClustDB:   CLSK218479
- BioCyc:   TPAL243276:TP_0022-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80090; Mature: 80090

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPCNARAADNFFLERVAQAEIRTRLLNLEERLILYRIPQMPGEVTQAEVASVAQNGRV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCE
RQTPCYGINPLLQKALSTVAGLNLFLIPQKRMRPSAQLLTTDLMLCALYSFFTHGENLLK
ECCCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
VDGTFRKKAFVMFQALFPVDPDVVSVALPAYLQRAGEERGTSRLLQEGRRVLEHLGLIVC
ECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
ESAQVHVQDKRWASFFSLTALERAVYLTVASTAILRKEVLVQRAQALRTLLCVLHPDAQY
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
APEDLTRVYRILVEEAAPSVAADFFSSLSLSKDTMLQKRKGALHDSSVFSMQSAITAIRT
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQLFGLLCVKDGLCALNEALFKGQYTRGPGMVLSATAELTIFPDGDMQGVLPILSCAHVC
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHH
SLQTVATFELNKKSCTTGFARGLTVQALAQALECKTGEQVPQNILSSFRQWYAQITALTL
HHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRGFVMQVDSSQQAFFESGGPLHPLVRTRLAEGVYFFDECQECMLYQALARARLSYLCEP
HCCEEEEECCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
IDTATPLFRPGEQGARALHVPSFSFPVRSARGVSEESTRDFAHLGAFVLETPNVSCTHSA
CCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCC
ADTPSISEQTGGVAHVQSEEDVDPSTSGATGKYWDKAQWRKVQRMRRAVRLQRLKEFEAH
CCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLKLDATEQTELRARLQRGLILDRMQLSSETIRRERTEASGVDFLGKYRLAECALRSG
HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
ALLEIETSSGQSVHKIVGTVCAIEKCEEDALLHVCVHAELPPERVSIARASRIVLLKNSI
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHEEEEECCCC
FS
CC
>Mature Secondary Structure
MRSPCNARAADNFFLERVAQAEIRTRLLNLEERLILYRIPQMPGEVTQAEVASVAQNGRV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCE
RQTPCYGINPLLQKALSTVAGLNLFLIPQKRMRPSAQLLTTDLMLCALYSFFTHGENLLK
ECCCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
VDGTFRKKAFVMFQALFPVDPDVVSVALPAYLQRAGEERGTSRLLQEGRRVLEHLGLIVC
ECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
ESAQVHVQDKRWASFFSLTALERAVYLTVASTAILRKEVLVQRAQALRTLLCVLHPDAQY
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
APEDLTRVYRILVEEAAPSVAADFFSSLSLSKDTMLQKRKGALHDSSVFSMQSAITAIRT
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQLFGLLCVKDGLCALNEALFKGQYTRGPGMVLSATAELTIFPDGDMQGVLPILSCAHVC
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHH
SLQTVATFELNKKSCTTGFARGLTVQALAQALECKTGEQVPQNILSSFRQWYAQITALTL
HHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRGFVMQVDSSQQAFFESGGPLHPLVRTRLAEGVYFFDECQECMLYQALARARLSYLCEP
HCCEEEEECCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
IDTATPLFRPGEQGARALHVPSFSFPVRSARGVSEESTRDFAHLGAFVLETPNVSCTHSA
CCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCC
ADTPSISEQTGGVAHVQSEEDVDPSTSGATGKYWDKAQWRKVQRMRRAVRLQRLKEFEAH
CCCCCCCHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLKLDATEQTELRARLQRGLILDRMQLSSETIRRERTEASGVDFLGKYRLAECALRSG
HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
ALLEIETSSGQSVHKIVGTVCAIEKCEEDALLHVCVHAELPPERVSIARASRIVLLKNSI
CEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHEEEEECCCC
FS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876