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The map label for this gene is oxaA1 [H]

Identifier: 188587521

GI number: 188587521

Start: 3163564

End: 3164205

Strand: Reverse

Name: oxaA1 [H]

Synonym: Nther_2932

Alternate gene names: 188587521

Gene position: 3164205-3163564 (Counterclockwise)

Preceding gene: 188587522

Following gene: 188587520

Centisome position: 99.96

GC content: 35.51

Gene sequence:

>642_bases
ATGTTAGATCCAATTATTTCAGTCCTGGGCAGTATTCTCAGCTTTTTTTATGAACTAACCGGCAGTTATGGACTTGCTAT
TGTAATATTGACAATTGGAGTTAGAGCTTTAACTTTTCCATTAATGGCTAAACAAATGCAATCTACTAACAAAATGCAAG
AATTACAACCTGAATTGAAAAAATTACAGGAAAAATACAAGGACGATAAAGAAACACTTAATAAGAAAACAATGGAGTTA
TGGAAAAAACACAAAGTTAACCCAGCAGCTGGTTGCCTGCCTTTGATTGTACAGATGCCCGTATTAATTGCTATGTTTAG
ATTACTTCGTGATTACCAACAATTTTTAGGTGATGTAGACCCTGTATTCCTAGGTATTGACTTAAGTCAATCAGATCCTT
TCTTTATCTTGCCAATACTTGCAGGTGGTACAACATTTTTGCAGCAAAAGCTAACTATGACAAGCCAATCTAATTCATCA
ATGATGATGATCATGCCCTTTATGATAATTTTTATCAGCTCTACGTTACCAGCAGGGCTTCCTCTATACTTCGTAGTGGG
TAATATCTTTTCCTTGATTGCACATTTGGTTATGAAGAAGAATAAACCCGAGACCCAAAAAGAAGGGGGAGCTAATCAGT
AA

Upstream 100 bases:

>100_bases
ATCTAGGATAGTATCAGGGAACAATTTCTAGTTTAAGAAATCTAGAAAAAATAACGGAAAAAGATGTTGTTTTGATTCGA
TAAAAAGAAGGAGGAAGTTT

Downstream 100 bases:

>100_bases
TGAGCCAGGTTGAAGTTACTGGTAAAACGGTAGAAGAGGCTGTAGAAAAGGGTCTATCTGAGCTGGGTATAGAACGGAAC
CTAGCTGATATTGAGGTAAT

Product: 60 kDa inner membrane insertion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELKKLQEKYKDDKETLNKKTMEL
WKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDVDPVFLGIDLSQSDPFFILPILAGGTTFLQQKLTMTSQSNSS
MMMIMPFMIIFISSTLPAGLPLYFVVGNIFSLIAHLVMKKNKPETQKEGGANQ

Sequences:

>Translated_213_residues
MLDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELKKLQEKYKDDKETLNKKTMEL
WKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDVDPVFLGIDLSQSDPFFILPILAGGTTFLQQKLTMTSQSNSS
MMMIMPFMIIFISSTLPAGLPLYFVVGNIFSLIAHLVMKKNKPETQKEGGANQ
>Mature_213_residues
MLDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELKKLQEKYKDDKETLNKKTMEL
WKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDVDPVFLGIDLSQSDPFFILPILAGGTTFLQQKLTMTSQSNSS
MMMIMPFMIIFISSTLPAGLPLYFVVGNIFSLIAHLVMKKNKPETQKEGGANQ

Specific function: Required for the insertion of integral membrane proteins into the membrane. May also be involved in protein secretion processes [H]

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=190, Percent_Identity=38.4210526315789, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708
- InterPro:   IPR023060 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 23898; Mature: 23898

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELK
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQEKYKDDKETLNKKTMELWKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDVD
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVFLGIDLSQSDPFFILPILAGGTTFLQQKLTMTSQSNSSMMMIMPFMIIFISSTLPAGL
CEEEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
PLYFVVGNIFSLIAHLVMKKNKPETQKEGGANQ
HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure
MLDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELK
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQEKYKDDKETLNKKTMELWKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDVD
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVFLGIDLSQSDPFFILPILAGGTTFLQQKLTMTSQSNSSMMMIMPFMIIFISSTLPAGL
CEEEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
PLYFVVGNIFSLIAHLVMKKNKPETQKEGGANQ
HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]