| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587491
Identifier: 188587491
GI number: 188587491
Start: 3132309
End: 3133862
Strand: Reverse
Name: 188587491
Synonym: Nther_2901
Alternate gene names: NA
Gene position: 3133862-3132309 (Counterclockwise)
Preceding gene: 188587492
Following gene: 188587490
Centisome position: 99.0
GC content: 33.72
Gene sequence:
>1554_bases ATGAATTGGGAGCAAATTAAAACTGTATTGTTAGTTATATTAGTCATAAATAGTATTTTCCTTACTAGTCGTCTTTGGGT CACGGATTATCACTATGAAAGGTCTGAAGAACCAAATATAGAAGAAATAACCTATGGCGACAATCCTGAACTATTTCAAC AGGTTAAACCTGAAAAAATTGTCTATCATGCTAATGAGCAAATTTTTCTTTTAAGACGGGACAGAGAGGTATATGAACAA GTCTGGAAGCTATTTTGGGACAACATTATAACAGGAGAGAATTTTACTACTGGAAATATTAAAGATAAAGAATCATTAGA GCTAACTAAACCTTATTTTATATATAAATTTTCTGGAGTATCACCTTTAAACTTGATGCTGAATGGAGAATACGGGTTAC CTTCCAATTATGACGAAGAATATTCAGATTTACTTGTGACCTTAGATGAAAATCCCCAAATTTATCTAGTTGATAACGGC TCTCAAGATGGTTATCCTGTTAACATGTCAGTGTTAGGATTTGAAGAGTTTGAACAAGAAGAATTAGAAAAACGGAATTT AGAATCAGGTCAAGAAATAACTTCTCAGGATATAGCTGAAATTTTCTATCATACGGGACAGGAGTACTTGGCGGATATTG AAGACCTGTTAGGTCAAGTTCCTGACTCCATTTCAAAAGAATGGTATGAAATCTTAAAATTAAAATCAGAGGAGATTCAC GATAAAGGGTATACAATGTACTTACCCACTGACAAAGAGCTTGAAAACCTTGATCTGATTCCTCAAGTTTTAAATTTTGA AGAGCAGAACAAGGAGAAATTGGCGAAAGCTTTCTTTTTAGACTTATCCTTTGTTAGAAAAATAGAGGAACGAGATGGTA CTACTATATATACCGATGGTCAAAGAGGGCTCAGGTTTTATCCTGATGGCGGTTTACAATATAATGCCCCACAAACCAGG GATAGTATAAGAACTGCTGATTCTAATACTTTCTTAGATAGAGGTGGACGATTTATTTCACTTTATGGTGGCTGGGTTGA TAATCTGAAAGCAGCACAGCTAACTACGCCTAGCAGTGAATTTCAAGACTCTACCTACAATTTGACTGAAATAAATTATC TGTATTATCATCATGGTTTTCCAATTTTGAATGAATTTTTATTGAATATATCTATGGCAGATAATAAGTTAGTAGAGTAT TTTAGACATATACCAGAGAGCTTTAAAAAGCTTGATAAAGAAGAGGGGAATTTGGTAGAGATTCAAGAAATTATCAAAAA CTGGATTGCTGAAGAACTTTATGATGGTGGAGAAGAGCTTAGTTTTGATATTGAACAAGAGCAAGATTTACAGGTTTTAA CTAAAGAATTAGAAAAACAGATTTTAGATGCAGCTAATAAATTAAAAGGGCTAGATAACATCACCCTTGGGTATGAACTT CAATCTGCAGAAGGCGAGAACGAGTATTATATTCTTCCAGTTTGGAATATAGAGTCAGGTGATGAATCTAAGAATTTTCC TGCTTGGAATTCATCGAGAGATAGTTTATATTAG
Upstream 100 bases:
>100_bases GAAATAATCAGAAATCATGGTGGAGACATTAACGTATCCAGTCAAGAGGGAAGGGGAACGGAAGTGATCGTTTATCTCCC GAAAAATCAGGAGGTTCAAT
Downstream 100 bases:
>100_bases ATTATTTAAAGTCAATTCTTTGGGATGATATGAAGGAAGGGTGAATTTATGTGGATTGGGGACAGGCTAAAAATATTTTA TTAGTTGCCTTTTTGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MNWEQIKTVLLVILVINSIFLTSRLWVTDYHYERSEEPNIEEITYGDNPELFQQVKPEKIVYHANEQIFLLRRDREVYEQ VWKLFWDNIITGENFTTGNIKDKESLELTKPYFIYKFSGVSPLNLMLNGEYGLPSNYDEEYSDLLVTLDENPQIYLVDNG SQDGYPVNMSVLGFEEFEQEELEKRNLESGQEITSQDIAEIFYHTGQEYLADIEDLLGQVPDSISKEWYEILKLKSEEIH DKGYTMYLPTDKELENLDLIPQVLNFEEQNKEKLAKAFFLDLSFVRKIEERDGTTIYTDGQRGLRFYPDGGLQYNAPQTR DSIRTADSNTFLDRGGRFISLYGGWVDNLKAAQLTTPSSEFQDSTYNLTEINYLYYHHGFPILNEFLLNISMADNKLVEY FRHIPESFKKLDKEEGNLVEIQEIIKNWIAEELYDGGEELSFDIEQEQDLQVLTKELEKQILDAANKLKGLDNITLGYEL QSAEGENEYYILPVWNIESGDESKNFPAWNSSRDSLY
Sequences:
>Translated_517_residues MNWEQIKTVLLVILVINSIFLTSRLWVTDYHYERSEEPNIEEITYGDNPELFQQVKPEKIVYHANEQIFLLRRDREVYEQ VWKLFWDNIITGENFTTGNIKDKESLELTKPYFIYKFSGVSPLNLMLNGEYGLPSNYDEEYSDLLVTLDENPQIYLVDNG SQDGYPVNMSVLGFEEFEQEELEKRNLESGQEITSQDIAEIFYHTGQEYLADIEDLLGQVPDSISKEWYEILKLKSEEIH DKGYTMYLPTDKELENLDLIPQVLNFEEQNKEKLAKAFFLDLSFVRKIEERDGTTIYTDGQRGLRFYPDGGLQYNAPQTR DSIRTADSNTFLDRGGRFISLYGGWVDNLKAAQLTTPSSEFQDSTYNLTEINYLYYHHGFPILNEFLLNISMADNKLVEY FRHIPESFKKLDKEEGNLVEIQEIIKNWIAEELYDGGEELSFDIEQEQDLQVLTKELEKQILDAANKLKGLDNITLGYEL QSAEGENEYYILPVWNIESGDESKNFPAWNSSRDSLY >Mature_517_residues MNWEQIKTVLLVILVINSIFLTSRLWVTDYHYERSEEPNIEEITYGDNPELFQQVKPEKIVYHANEQIFLLRRDREVYEQ VWKLFWDNIITGENFTTGNIKDKESLELTKPYFIYKFSGVSPLNLMLNGEYGLPSNYDEEYSDLLVTLDENPQIYLVDNG SQDGYPVNMSVLGFEEFEQEELEKRNLESGQEITSQDIAEIFYHTGQEYLADIEDLLGQVPDSISKEWYEILKLKSEEIH DKGYTMYLPTDKELENLDLIPQVLNFEEQNKEKLAKAFFLDLSFVRKIEERDGTTIYTDGQRGLRFYPDGGLQYNAPQTR DSIRTADSNTFLDRGGRFISLYGGWVDNLKAAQLTTPSSEFQDSTYNLTEINYLYYHHGFPILNEFLLNISMADNKLVEY FRHIPESFKKLDKEEGNLVEIQEIIKNWIAEELYDGGEELSFDIEQEQDLQVLTKELEKQILDAANKLKGLDNITLGYEL QSAEGENEYYILPVWNIESGDESKNFPAWNSSRDSLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60400; Mature: 60400
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWEQIKTVLLVILVINSIFLTSRLWVTDYHYERSEEPNIEEITYGDNPELFQQVKPEKI CCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCEE VYHANEQIFLLRRDREVYEQVWKLFWDNIITGENFTTGNIKDKESLELTKPYFIYKFSGV EEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEECCC SPLNLMLNGEYGLPSNYDEEYSDLLVTLDENPQIYLVDNGSQDGYPVNMSVLGFEEFEQE CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEECHHHHHHH ELEKRNLESGQEITSQDIAEIFYHTGQEYLADIEDLLGQVPDSISKEWYEILKLKSEEIH HHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC DKGYTMYLPTDKELENLDLIPQVLNFEEQNKEKLAKAFFLDLSFVRKIEERDGTTIYTDG CCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC QRGLRFYPDGGLQYNAPQTRDSIRTADSNTFLDRGGRFISLYGGWVDNLKAAQLTTPSSE CCCCEECCCCCEEECCCCCHHHHHCCCCCHHHHCCCCEEEEECCHHCCCCEEEECCCCHH FQDSTYNLTEINYLYYHHGFPILNEFLLNISMADNKLVEYFRHIPESFKKLDKEEGNLVE HCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEH IQEIIKNWIAEELYDGGEELSFDIEQEQDLQVLTKELEKQILDAANKLKGLDNITLGYEL HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE QSAEGENEYYILPVWNIESGDESKNFPAWNSSRDSLY ECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNWEQIKTVLLVILVINSIFLTSRLWVTDYHYERSEEPNIEEITYGDNPELFQQVKPEKI CCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCEE VYHANEQIFLLRRDREVYEQVWKLFWDNIITGENFTTGNIKDKESLELTKPYFIYKFSGV EEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEECCC SPLNLMLNGEYGLPSNYDEEYSDLLVTLDENPQIYLVDNGSQDGYPVNMSVLGFEEFEQE CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEECHHHHHHH ELEKRNLESGQEITSQDIAEIFYHTGQEYLADIEDLLGQVPDSISKEWYEILKLKSEEIH HHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC DKGYTMYLPTDKELENLDLIPQVLNFEEQNKEKLAKAFFLDLSFVRKIEERDGTTIYTDG CCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC QRGLRFYPDGGLQYNAPQTRDSIRTADSNTFLDRGGRFISLYGGWVDNLKAAQLTTPSSE CCCCEECCCCCEEECCCCCHHHHHCCCCCHHHHCCCCEEEEECCHHCCCCEEEECCCCHH FQDSTYNLTEINYLYYHHGFPILNEFLLNISMADNKLVEYFRHIPESFKKLDKEEGNLVE HCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEH IQEIIKNWIAEELYDGGEELSFDIEQEQDLQVLTKELEKQILDAANKLKGLDNITLGYEL HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE QSAEGENEYYILPVWNIESGDESKNFPAWNSSRDSLY ECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA