Click here to switch to the map view.

The map label for this gene is yfhL [C]

Identifier: 188587472

GI number: 188587472

Start: 3113330

End: 3113500

Strand: Reverse

Name: yfhL [C]

Synonym: Nther_2882

Alternate gene names: 188587472

Gene position: 3113500-3113330 (Counterclockwise)

Preceding gene: 188587475

Following gene: 188587471

Centisome position: 98.36

GC content: 44.44

Gene sequence:

>171_bases
ATGGCCTACAAGATTACTGAGGAATGCATTAAGTGTGGCGCTTGTGAACCTGAATGCCCAACAGAAGCTATTTCTGAAGG
AGAAGAGATGTACGTAATTGATGCCGATAACTGTATCGATTGCGGGGCATGTGCTGATGTCTGCCCAGTGGACGCTATAA
TTCAAGAATAA

Upstream 100 bases:

>100_bases
TCCCCATTGTTCCCAGAGATATGTAAAATAATCCTTGTTGCCACTGTTTTTAAAAAGTGCTACTATAAGGGGGACAATAA
TTAAAAGGGAGGGGAGTTAC

Downstream 100 bases:

>100_bases
CCTCCTGAAGTTTTATTTTAGGAGAGATTATTTGACGTTACTTAAAGTGTTTTCAAAGAGTTACGGGGTAAATGTTACAT
TTACCCCGTTATTACCCTAT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MAYKITEECIKCGACEPECPTEAISEGEEMYVIDADNCIDCGACADVCPVDAIIQE

Sequences:

>Translated_56_residues
MAYKITEECIKCGACEPECPTEAISEGEEMYVIDADNCIDCGACADVCPVDAIIQE
>Mature_55_residues
AYKITEECIKCGACEPECPTEAISEGEEMYVIDADNCIDCGACADVCPVDAIIQE

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 6007; Mature: 5876

Theoretical pI: Translated: 3.38; Mature: 3.38

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

14.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
17.9 %Cys+Met (Translated Protein)
14.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
16.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKITEECIKCGACEPECPTEAISEGEEMYVIDADNCIDCGACADVCPVDAIIQE
CCCCCCHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
AYKITEECIKCGACEPECPTEAISEGEEMYVIDADNCIDCGACADVCPVDAIIQE
CCCCCHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4433520 [H]