Click here to switch to the map view.

The map label for this gene is spoIID [H]

Identifier: 188587429

GI number: 188587429

Start: 3072461

End: 3073498

Strand: Reverse

Name: spoIID [H]

Synonym: Nther_2839

Alternate gene names: 188587429

Gene position: 3073498-3072461 (Counterclockwise)

Preceding gene: 188587430

Following gene: 188587428

Centisome position: 97.09

GC content: 36.51

Gene sequence:

>1038_bases
ATGGTCAAAAAAAAGAAAAATGAATTACAAAAAATTCTAATTGTTGGAGCTGCTATAGGAGCTATACTTTTAATGATAAT
TATGGCAATAAGTTCTACCTATTATTATTTAGCAGATGATCCAGAACCCGAAGAGCCACCAGAACTTGAACCTCTGACTC
TAGATCGGGATGACATTGTAGTAAGAGTATATTTTCATGAAGAACAAGAAGTTAAAGAATTAAAATTAGAAGAATATCTG
GTAGGAGTAGTGATTTCTGAAATGCCACCTGAATTTGATCAAGAAGCACTAAAATCTCAAGCGGTTGTAGCAAGAAGTTA
CACATTATCCAGATTGAATAAAACAGGTGGCCCTGGTTGTGATAATCATCAGGAAGCTGATGTTTGTACGGATCCTGATT
TCTGTCAAGCTCATTATACTAAAGAAACAGTAGAAAATATTTTTGGAGAGAATGCTAATAAATATTATGACAGAGTAAAA
GATGCGGTTTTGGCAACAAAAGGTGAAATTATGACTTATAATGGTGATCCCGTTCCGGAAGCACCTTATCACTCAACTTG
TGGAGGGCAGACAGAAACAGCTGGAGCTGTTTGGTCAGCTGATTTTCCTTTCTTGCAATCTGTTGAATGTGATTATTGCG
ATCACTCTTCATACTATCGAGCTGAAAGAAACCTCAATAAAAAAGATTTAGAAGCAGGCTTCAGTCAAGCAGGCTTTGAA
ATTCCTGTTTTAGCTGCTGGAGAGATGCCCGAGTTGCAAGTTACTAAGCAATCGGAAACTGGCAGAATTCAAAAAGCAAA
TCTATTAGGTAATCAGCTTTCAGGTCATGATATCAGGTCAATGTTTGATATACCTTCAACAAACATAGAATGGATACCTG
AACACGATTCTGTAAGAGTCGTTACAAAGGGGTTTGGCCACGGTGTCGGCCTTTGTCAATACGGAGCTGATGGTATGGCC
AGAGATGGCCAAAACTATCAGGATATAATTAAATACTATTTTGAAGGAGTTAAAATAAAAGATAATTTATATAAATAA

Upstream 100 bases:

>100_bases
AACACCTGGACATTAAGTTGTCCAGGTGTTCTTTTTTTTTGCATATAGCCATATCTATAAATAGAGTCGTATTATAGATC
AACTTATTAGGAGTGCTGGT

Downstream 100 bases:

>100_bases
CTTATATTGAACTGCTGAAAAGTCCCGAAAAGGGACTTTTTTTATTTGTTTGCCCGGCATGCCTGCCGCGCCGATGGGTT
GAAAGAAACCCTGTCACCTA

Product: stage II sporulation protein D

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MVKKKKNELQKILIVGAAIGAILLMIIMAISSTYYYLADDPEPEEPPELEPLTLDRDDIVVRVYFHEEQEVKELKLEEYL
VGVVISEMPPEFDQEALKSQAVVARSYTLSRLNKTGGPGCDNHQEADVCTDPDFCQAHYTKETVENIFGENANKYYDRVK
DAVLATKGEIMTYNGDPVPEAPYHSTCGGQTETAGAVWSADFPFLQSVECDYCDHSSYYRAERNLNKKDLEAGFSQAGFE
IPVLAAGEMPELQVTKQSETGRIQKANLLGNQLSGHDIRSMFDIPSTNIEWIPEHDSVRVVTKGFGHGVGLCQYGADGMA
RDGQNYQDIIKYYFEGVKIKDNLYK

Sequences:

>Translated_345_residues
MVKKKKNELQKILIVGAAIGAILLMIIMAISSTYYYLADDPEPEEPPELEPLTLDRDDIVVRVYFHEEQEVKELKLEEYL
VGVVISEMPPEFDQEALKSQAVVARSYTLSRLNKTGGPGCDNHQEADVCTDPDFCQAHYTKETVENIFGENANKYYDRVK
DAVLATKGEIMTYNGDPVPEAPYHSTCGGQTETAGAVWSADFPFLQSVECDYCDHSSYYRAERNLNKKDLEAGFSQAGFE
IPVLAAGEMPELQVTKQSETGRIQKANLLGNQLSGHDIRSMFDIPSTNIEWIPEHDSVRVVTKGFGHGVGLCQYGADGMA
RDGQNYQDIIKYYFEGVKIKDNLYK
>Mature_345_residues
MVKKKKNELQKILIVGAAIGAILLMIIMAISSTYYYLADDPEPEEPPELEPLTLDRDDIVVRVYFHEEQEVKELKLEEYL
VGVVISEMPPEFDQEALKSQAVVARSYTLSRLNKTGGPGCDNHQEADVCTDPDFCQAHYTKETVENIFGENANKYYDRVK
DAVLATKGEIMTYNGDPVPEAPYHSTCGGQTETAGAVWSADFPFLQSVECDYCDHSSYYRAERNLNKKDLEAGFSQAGFE
IPVLAAGEMPELQVTKQSETGRIQKANLLGNQLSGHDIRSMFDIPSTNIEWIPEHDSVRVVTKGFGHGVGLCQYGADGMA
RDGQNYQDIIKYYFEGVKIKDNLYK

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 38638; Mature: 38638

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKKKNELQKILIVGAAIGAILLMIIMAISSTYYYLADDPEPEEPPELEPLTLDRDDIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCEE
VRVYFHEEQEVKELKLEEYLVGVVISEMPPEFDQEALKSQAVVARSYTLSRLNKTGGPGC
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DNHQEADVCTDPDFCQAHYTKETVENIFGENANKYYDRVKDAVLATKGEIMTYNGDPVPE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC
APYHSTCGGQTETAGAVWSADFPFLQSVECDYCDHSSYYRAERNLNKKDLEAGFSQAGFE
CCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCE
IPVLAAGEMPELQVTKQSETGRIQKANLLGNQLSGHDIRSMFDIPSTNIEWIPEHDSVRV
EEEEECCCCCCEEEECCCCCCCEEEHHHHCCCCCCCHHHHHHCCCCCCCEEECCCCCEEE
VTKGFGHGVGLCQYGADGMARDGQNYQDIIKYYFEGVKIKDNLYK
EEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCC
>Mature Secondary Structure
MVKKKKNELQKILIVGAAIGAILLMIIMAISSTYYYLADDPEPEEPPELEPLTLDRDDIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCEE
VRVYFHEEQEVKELKLEEYLVGVVISEMPPEFDQEALKSQAVVARSYTLSRLNKTGGPGC
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DNHQEADVCTDPDFCQAHYTKETVENIFGENANKYYDRVKDAVLATKGEIMTYNGDPVPE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC
APYHSTCGGQTETAGAVWSADFPFLQSVECDYCDHSSYYRAERNLNKKDLEAGFSQAGFE
CCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCE
IPVLAAGEMPELQVTKQSETGRIQKANLLGNQLSGHDIRSMFDIPSTNIEWIPEHDSVRV
EEEEECCCCCCEEEECCCCCCCEEEHHHHCCCCCCCHHHHHHCCCCCCCEEECCCCCEEE
VTKGFGHGVGLCQYGADGMARDGQNYQDIIKYYFEGVKIKDNLYK
EEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]