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The map label for this gene is yaaJ [C]

Identifier: 188587360

GI number: 188587360

Start: 2987862

End: 2989214

Strand: Direct

Name: yaaJ [C]

Synonym: Nther_2767

Alternate gene names: 188587360

Gene position: 2987862-2989214 (Clockwise)

Preceding gene: 188587352

Following gene: 188587363

Centisome position: 94.39

GC content: 43.68

Gene sequence:

>1353_bases
ATGGAATTTCTTTTAACGATTAATGATGCATTGAATGAAATAGTCTGGGGTCCTCCTTTTCTCATCTTATTAGTTGGTAC
CGGACTGTACTTAACAATTAGGTTGAGATTCTTTCAGTTTACTCATTTTGGGACGTCCTGGAAGGAAACGATTATTGAAA
GGATTAAAAAGACTGAATCAGGTGAAGCAGGGGCTATCACAGGCTTTCAGGCGATTACTTCCGCCATGGCGGCAACGATA
GGAATTGGAAATATCGCCGGTGTTGCTACTGCCCTTCACCTGGGTGGACCTGGAGCGTTATTTTGGATGTGGATTACAGC
CCTTGTAGGTATGGCTACTAAGTTTGGGGAAGCTGCTTTGGGAGTTAAGTACAGAACTGATGAAGACGGAGAAATTTCCG
GTGGAGTCATGTACTATATTCAAAACGGTCTAGGAAAGAACTGGATGTGGCTTGCCATTTTATATGCTTTATTCGCCGGT
ATCGCAGCCTTTGGAATTGGAAATATGGTACAATCCAACACAGTGGCTGAAGCAGTAGCAGACGATTTTGGAGTTCCTAT
GTATATCACTGGTTTGGTTGCTGCTGTGCTAGTAGCTCTAGTTATCTTGGGAGGAATTAAGCGTATTGCCCAGGTAGCAG
AGATCCTGGTACCCATCATGACGGTAGTGTATATCTTAGGCGCCCTTGTAATTATCTTAATGCATCTACCCGAAGTTCCA
GGGGCATTTAGAGATATCTTTGTGCATGCCCTTAACCCCGGTGCTGCCGGCGGAGGAGCTGCAGGAGCAGGTATTATGGT
CGCCATTCGCTACGGTGTTGCCCGGGGAATCTTCTCAAACGAAGCCGGTCTAGGTGCTGCCTCTATCGTACACGCCCAGG
CCAGAAATACTCCCGCCAAGCAAGGTATGTGGGGTATTTGGGAAGTCTTTATTGACACTATTCTAGTCGGTACTATGACT
GCCCTGGCCATTTTAGTAACAGGAGCACTAGAATCAGGTGAAACTGGTGCTGTATTAACATCTGAAGCTTTTAACAGAGG
GTTACCTGGCCCTGGTGGAGTTTTCATTACTATTGCTATTATGGTTTTTGCTTATACTACTATGCTTACCTGGTCTTTCT
ATGGAGAGAAAAGTTGGGAATACATCTTTGGACCAAAAATTCGTATTCCTTATAGGATTATATTCTTAATTTTAATTTTC
ACCGGTGCAGTAGGAGCCTTGGAAGTTGTTTGGGATTTTGCAGATACCATGAATGGCTTGATGGCAGCACCAAACTTAAT
CGCTTTAATAGCCTTAGGTGGAGTGCTAGCTAAAGAGAAAGACAAATACATTAACAATGAATTAGATAAGTAA

Upstream 100 bases:

>100_bases
CTTATTTGGCACAAATCACAAAGAACTGAAGCTGGAATTATAAGAATGAGTATTGTAGTCAATGGCTGTGTCACTTCAAC
ATTTTAAGGGAGGGAATTAT

Downstream 100 bases:

>100_bases
TAACAAACTCCCAAAAAGCAATTTAAAATTTTATATAATAAAGAGGATTCCCTCGAGTTTTTGGTTTTAGAGGGAATCCT
TTTTATTTTCCACATCCGAT

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MEFLLTINDALNEIVWGPPFLILLVGTGLYLTIRLRFFQFTHFGTSWKETIIERIKKTESGEAGAITGFQAITSAMAATI
GIGNIAGVATALHLGGPGALFWMWITALVGMATKFGEAALGVKYRTDEDGEISGGVMYYIQNGLGKNWMWLAILYALFAG
IAAFGIGNMVQSNTVAEAVADDFGVPMYITGLVAAVLVALVILGGIKRIAQVAEILVPIMTVVYILGALVIILMHLPEVP
GAFRDIFVHALNPGAAGGGAAGAGIMVAIRYGVARGIFSNEAGLGAASIVHAQARNTPAKQGMWGIWEVFIDTILVGTMT
ALAILVTGALESGETGAVLTSEAFNRGLPGPGGVFITIAIMVFAYTTMLTWSFYGEKSWEYIFGPKIRIPYRIIFLILIF
TGAVGALEVVWDFADTMNGLMAAPNLIALIALGGVLAKEKDKYINNELDK

Sequences:

>Translated_450_residues
MEFLLTINDALNEIVWGPPFLILLVGTGLYLTIRLRFFQFTHFGTSWKETIIERIKKTESGEAGAITGFQAITSAMAATI
GIGNIAGVATALHLGGPGALFWMWITALVGMATKFGEAALGVKYRTDEDGEISGGVMYYIQNGLGKNWMWLAILYALFAG
IAAFGIGNMVQSNTVAEAVADDFGVPMYITGLVAAVLVALVILGGIKRIAQVAEILVPIMTVVYILGALVIILMHLPEVP
GAFRDIFVHALNPGAAGGGAAGAGIMVAIRYGVARGIFSNEAGLGAASIVHAQARNTPAKQGMWGIWEVFIDTILVGTMT
ALAILVTGALESGETGAVLTSEAFNRGLPGPGGVFITIAIMVFAYTTMLTWSFYGEKSWEYIFGPKIRIPYRIIFLILIF
TGAVGALEVVWDFADTMNGLMAAPNLIALIALGGVLAKEKDKYINNELDK
>Mature_450_residues
MEFLLTINDALNEIVWGPPFLILLVGTGLYLTIRLRFFQFTHFGTSWKETIIERIKKTESGEAGAITGFQAITSAMAATI
GIGNIAGVATALHLGGPGALFWMWITALVGMATKFGEAALGVKYRTDEDGEISGGVMYYIQNGLGKNWMWLAILYALFAG
IAAFGIGNMVQSNTVAEAVADDFGVPMYITGLVAAVLVALVILGGIKRIAQVAEILVPIMTVVYILGALVIILMHLPEVP
GAFRDIFVHALNPGAAGGGAAGAGIMVAIRYGVARGIFSNEAGLGAASIVHAQARNTPAKQGMWGIWEVFIDTILVGTMT
ALAILVTGALESGETGAVLTSEAFNRGLPGPGGVFITIAIMVFAYTTMLTWSFYGEKSWEYIFGPKIRIPYRIIFLILIF
TGAVGALEVVWDFADTMNGLMAAPNLIALIALGGVLAKEKDKYINNELDK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=451, Percent_Identity=33.9246119733925, Blast_Score=228, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47824; Mature: 47824

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLLTINDALNEIVWGPPFLILLVGTGLYLTIRLRFFQFTHFGTSWKETIIERIKKTES
CCEEEEEHHHHHHHHCCCCHHHHHHCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCC
GEAGAITGFQAITSAMAATIGIGNIAGVATALHLGGPGALFWMWITALVGMATKFGEAAL
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHC
GVKYRTDEDGEISGGVMYYIQNGLGKNWMWLAILYALFAGIAAFGIGNMVQSNTVAEAVA
CEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDFGVPMYITGLVAAVLVALVILGGIKRIAQVAEILVPIMTVVYILGALVIILMHLPEVP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAFRDIFVHALNPGAAGGGAAGAGIMVAIRYGVARGIFSNEAGLGAASIVHAQARNTPAK
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
QGMWGIWEVFIDTILVGTMTALAILVTGALESGETGAVLTSEAFNRGLPGPGGVFITIAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHH
MVFAYTTMLTWSFYGEKSWEYIFGPKIRIPYRIIFLILIFTGAVGALEVVWDFADTMNGL
HHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MAAPNLIALIALGGVLAKEKDKYINNELDK
HHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEFLLTINDALNEIVWGPPFLILLVGTGLYLTIRLRFFQFTHFGTSWKETIIERIKKTES
CCEEEEEHHHHHHHHCCCCHHHHHHCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCC
GEAGAITGFQAITSAMAATIGIGNIAGVATALHLGGPGALFWMWITALVGMATKFGEAAL
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHC
GVKYRTDEDGEISGGVMYYIQNGLGKNWMWLAILYALFAGIAAFGIGNMVQSNTVAEAVA
CEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDFGVPMYITGLVAAVLVALVILGGIKRIAQVAEILVPIMTVVYILGALVIILMHLPEVP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAFRDIFVHALNPGAAGGGAAGAGIMVAIRYGVARGIFSNEAGLGAASIVHAQARNTPAK
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
QGMWGIWEVFIDTILVGTMTALAILVTGALESGETGAVLTSEAFNRGLPGPGGVFITIAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHH
MVFAYTTMLTWSFYGEKSWEYIFGPKIRIPYRIIFLILIFTGAVGALEVVWDFADTMNGL
HHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MAAPNLIALIALGGVLAKEKDKYINNELDK
HHCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]