| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188587325
Identifier: 188587325
GI number: 188587325
Start: 2946743
End: 2947675
Strand: Reverse
Name: 188587325
Synonym: Nther_2730
Alternate gene names: NA
Gene position: 2947675-2946743 (Counterclockwise)
Preceding gene: 188587326
Following gene: 188587323
Centisome position: 93.12
GC content: 38.69
Gene sequence:
>933_bases ATGTTGTATAAGAAAGCGGGAATCTTTATTACAGCAGTATCTGCAATTGGCTTTGGATCTATGACAGTATTGGCTCAACT TGCCTATGCTTCTGGAGCCAATACAATGGATTTGCTGACTATTCGATTTACTGTAGCTGCTCTCATTTTTGGAATAATTA TCGGATGTATGGCATTAACCAATCATCTTAAATGGCAGCTTAGCTGGAAACAGGTGTTAACTTTGATTGCCTTAGGGGCT TCAGGTTACGGAATTTTCTCTAGTATGTACTTTCACGGGGTATCTTTAATTCCGGCTTCATTAGCCGGGTTTTTGCTGTT TACTTACCCGGTAATGGTTTGTATCCTGGCTTACTTTTTAGGTGAAGAACCGGTTGATTCTCAAAAAATTCTTGCTCTAG CAGTATCCCTCTGTGGATCAATCTTTGTACTAGGACCTGTAGTGGAGGACGTAAACTGGGAAGGTGTAACCTTTGTTATG TTGGCTGCTTTCCTTTATTCACTGTACGTGGTAGGAAGCAGTCGTATTTTGAAAGATGTTCATTGGTTTCCTGCATCGGC TATACTAACTATATCTTGTGCAGGTTTTTTCCTTGGAAGGGAACTGATTTTCAATAACGGCTATAATCTAGCAAATATCA ATGATGAAATCATGTTTTATGGTGTTATCTTAGGAGTGTTTTCTACATTAATTGCCATTGCTTGCTTTTATTTAGGACTG AGCTTGATTGGACCATCACGAGCTTCTATCATTAGCACCTTAGAGCCAGTATCTTCTGCATGCTTGGCAGCGTTAATATT CAATGAACAACTTTCAATATTACAGTTAATAGGTGCCTCTTGTATACTGCTCTCAATATTAATTATCCAAAAAGCAAGAG ACGAAGACAATGTTGTGTCCAGTAATAGATATCATAGGGAAAGGCAAGCCTAA
Upstream 100 bases:
>100_bases CACAGAATCAAACAAGAAGCTGAATAATTTAATTTAACTTTGCAATTAAACTATTGAGTACTAGCTTAAACAAAACTTTC CAAGAAAGGGGGAATATACG
Downstream 100 bases:
>100_bases AATCAAGTAAAATAAAAAACAGGGGTTTTCAGTATTATAATTCAACTGAAGCCCCTGTTTTTTAATGATCAGTTACCTTT TATGATCCCATCTCAATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLYKKAGIFITAVSAIGFGSMTVLAQLAYASGANTMDLLTIRFTVAALIFGIIIGCMALTNHLKWQLSWKQVLTLIALGA SGYGIFSSMYFHGVSLIPASLAGFLLFTYPVMVCILAYFLGEEPVDSQKILALAVSLCGSIFVLGPVVEDVNWEGVTFVM LAAFLYSLYVVGSSRILKDVHWFPASAILTISCAGFFLGRELIFNNGYNLANINDEIMFYGVILGVFSTLIAIACFYLGL SLIGPSRASIISTLEPVSSACLAALIFNEQLSILQLIGASCILLSILIIQKARDEDNVVSSNRYHRERQA
Sequences:
>Translated_310_residues MLYKKAGIFITAVSAIGFGSMTVLAQLAYASGANTMDLLTIRFTVAALIFGIIIGCMALTNHLKWQLSWKQVLTLIALGA SGYGIFSSMYFHGVSLIPASLAGFLLFTYPVMVCILAYFLGEEPVDSQKILALAVSLCGSIFVLGPVVEDVNWEGVTFVM LAAFLYSLYVVGSSRILKDVHWFPASAILTISCAGFFLGRELIFNNGYNLANINDEIMFYGVILGVFSTLIAIACFYLGL SLIGPSRASIISTLEPVSSACLAALIFNEQLSILQLIGASCILLSILIIQKARDEDNVVSSNRYHRERQA >Mature_310_residues MLYKKAGIFITAVSAIGFGSMTVLAQLAYASGANTMDLLTIRFTVAALIFGIIIGCMALTNHLKWQLSWKQVLTLIALGA SGYGIFSSMYFHGVSLIPASLAGFLLFTYPVMVCILAYFLGEEPVDSQKILALAVSLCGSIFVLGPVVEDVNWEGVTFVM LAAFLYSLYVVGSSRILKDVHWFPASAILTISCAGFFLGRELIFNNGYNLANINDEIMFYGVILGVFSTLIAIACFYLGL SLIGPSRASIISTLEPVSSACLAALIFNEQLSILQLIGASCILLSILIIQKARDEDNVVSSNRYHRERQA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33564; Mature: 33564
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKKAGIFITAVSAIGFGSMTVLAQLAYASGANTMDLLTIRFTVAALIFGIIIGCMALT CCEECCCHHEEHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NHLKWQLSWKQVLTLIALGASGYGIFSSMYFHGVSLIPASLAGFLLFTYPVMVCILAYFL HHHHEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEEPVDSQKILALAVSLCGSIFVLGPVVEDVNWEGVTFVMLAAFLYSLYVVGSSRILKDV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH HWFPASAILTISCAGFFLGRELIFNNGYNLANINDEIMFYGVILGVFSTLIAIACFYLGL HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLIGPSRASIISTLEPVSSACLAALIFNEQLSILQLIGASCILLSILIIQKARDEDNVVS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SNRYHRERQA CCHHHHHCCC >Mature Secondary Structure MLYKKAGIFITAVSAIGFGSMTVLAQLAYASGANTMDLLTIRFTVAALIFGIIIGCMALT CCEECCCHHEEHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NHLKWQLSWKQVLTLIALGASGYGIFSSMYFHGVSLIPASLAGFLLFTYPVMVCILAYFL HHHHEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEEPVDSQKILALAVSLCGSIFVLGPVVEDVNWEGVTFVMLAAFLYSLYVVGSSRILKDV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH HWFPASAILTISCAGFFLGRELIFNNGYNLANINDEIMFYGVILGVFSTLIAIACFYLGL HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLIGPSRASIISTLEPVSSACLAALIFNEQLSILQLIGASCILLSILIIQKARDEDNVVS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SNRYHRERQA CCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA