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The map label for this gene is yfmS [H]

Identifier: 188587282

GI number: 188587282

Start: 2894420

End: 2895250

Strand: Reverse

Name: yfmS [H]

Synonym: Nther_2684

Alternate gene names: 188587282

Gene position: 2895250-2894420 (Counterclockwise)

Preceding gene: 188587283

Following gene: 188587280

Centisome position: 91.46

GC content: 35.74

Gene sequence:

>831_bases
ATGCAAGGGAACAATATTTTAGAATACATGGAACATGCTGCCCCCTACATTAAACAAGCTATGGTAGATGATATGGCAGT
GAGCCTGGTGGAAGCTGAGAATAATACTTTTTTAGCTTATTATCCTGGTGAAAGTATTGATCACGGTTGTGCAAAAGGTG
ATCCTGTTCCGGAAAAGACTGGACTATATCAGGCCATGAAACAAGGGAAGCATGTGGTTCAACACTTTGATAGTGAGAAA
TTTGGGTTTCCCTATGTTAGCTCTGCAGTACCTTTGAAGGATGAAAACTCCAATGTAGTAGGTAGTTTAGCATTTACTAA
AAGCCTAGAAAGACAGAATCAAGTTTACGAGATGGCCAATCACTTGTCTGAAGCTGTTAGTAAAATTATGGAATCAGCAG
AAACTATCTCTGGTGAATCAGAAGAGCTTGCTTCTACAGGAAATGAATTATCCGATCAAGTTCAAGTGTTGAATACCAAA
GTAAGTGAAACTGATGAAATTTTAAATACCGTACAAGGAGTTACTAATCAAACTAACCTTTTAGGACTCAATGCAGCCAT
AGAAGCTACTCGATTAGGAGAAAAAGGCCGTGGCTTTATGGTAGTAGCAGAAGAAATTAGAAAACTAGCAGATAACAGCA
AAGAATCTTTAAAGAAAATTGAAGAGATCTTAAGTACTTTAAAAGAAAATGAACAGAATGTAAGCACAGGAGTTCAAAAC
ATAGAAAATATTTCAAATCAGCAAGCTCACGAGCTACAATCCATTACTGAAGAAATTAAAAACATAGAAACAATGTCAAA
TAAATTGGTAGAATTTGCTAAAAACTTATAA

Upstream 100 bases:

>100_bases
TTAAATTTTAAAATAGAACTATTATACGTTAATGGACTATTTTGCCAATGAAACCAAATGAAACCAATAATACACATTAA
AATAAAGGAGGAGTAATAAT

Downstream 100 bases:

>100_bases
TCTCAGATTAATGCGAAAACAGGACCACCCTAACCTGTGCCGTCAAAGACTTGTAATATAGGCTAGGGGTGGTCCCTTTA
TGTAGAATATTAATTTTCTG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MQGNNILEYMEHAAPYIKQAMVDDMAVSLVEAENNTFLAYYPGESIDHGCAKGDPVPEKTGLYQAMKQGKHVVQHFDSEK
FGFPYVSSAVPLKDENSNVVGSLAFTKSLERQNQVYEMANHLSEAVSKIMESAETISGESEELASTGNELSDQVQVLNTK
VSETDEILNTVQGVTNQTNLLGLNAAIEATRLGEKGRGFMVVAEEIRKLADNSKESLKKIEEILSTLKENEQNVSTGVQN
IENISNQQAHELQSITEEIKNIETMSNKLVEFAKNL

Sequences:

>Translated_276_residues
MQGNNILEYMEHAAPYIKQAMVDDMAVSLVEAENNTFLAYYPGESIDHGCAKGDPVPEKTGLYQAMKQGKHVVQHFDSEK
FGFPYVSSAVPLKDENSNVVGSLAFTKSLERQNQVYEMANHLSEAVSKIMESAETISGESEELASTGNELSDQVQVLNTK
VSETDEILNTVQGVTNQTNLLGLNAAIEATRLGEKGRGFMVVAEEIRKLADNSKESLKKIEEILSTLKENEQNVSTGVQN
IENISNQQAHELQSITEEIKNIETMSNKLVEFAKNL
>Mature_276_residues
MQGNNILEYMEHAAPYIKQAMVDDMAVSLVEAENNTFLAYYPGESIDHGCAKGDPVPEKTGLYQAMKQGKHVVQHFDSEK
FGFPYVSSAVPLKDENSNVVGSLAFTKSLERQNQVYEMANHLSEAVSKIMESAETISGESEELASTGNELSDQVQVLNTK
VSETDEILNTVQGVTNQTNLLGLNAAIEATRLGEKGRGFMVVAEEIRKLADNSKESLKKIEEILSTLKENEQNVSTGVQN
IENISNQQAHELQSITEEIKNIETMSNKLVEFAKNL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=111, Percent_Identity=37.8378378378378, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI2367378, Length=89, Percent_Identity=38.2022471910112, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1788194, Length=75, Percent_Identity=41.3333333333333, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1788195, Length=59, Percent_Identity=49.1525423728814, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 30446; Mature: 30446

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNNILEYMEHAAPYIKQAMVDDMAVSLVEAENNTFLAYYPGESIDHGCAKGDPVPEKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHH
GLYQAMKQGKHVVQHFDSEKFGFPYVSSAVPLKDENSNVVGSLAFTKSLERQNQVYEMAN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
HLSEAVSKIMESAETISGESEELASTGNELSDQVQVLNTKVSETDEILNTVQGVTNQTNL
HHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LGLNAAIEATRLGEKGRGFMVVAEEIRKLADNSKESLKKIEEILSTLKENEQNVSTGVQN
EEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
IENISNQQAHELQSITEEIKNIETMSNKLVEFAKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGNNILEYMEHAAPYIKQAMVDDMAVSLVEAENNTFLAYYPGESIDHGCAKGDPVPEKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHH
GLYQAMKQGKHVVQHFDSEKFGFPYVSSAVPLKDENSNVVGSLAFTKSLERQNQVYEMAN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
HLSEAVSKIMESAETISGESEELASTGNELSDQVQVLNTKVSETDEILNTVQGVTNQTNL
HHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LGLNAAIEATRLGEKGRGFMVVAEEIRKLADNSKESLKKIEEILSTLKENEQNVSTGVQN
EEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
IENISNQQAHELQSITEEIKNIETMSNKLVEFAKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]