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The map label for this gene is 188587264

Identifier: 188587264

GI number: 188587264

Start: 2871483

End: 2872202

Strand: Reverse

Name: 188587264

Synonym: Nther_2666

Alternate gene names: NA

Gene position: 2872202-2871483 (Counterclockwise)

Preceding gene: 188587265

Following gene: 188587263

Centisome position: 90.73

GC content: 37.5

Gene sequence:

>720_bases
GTGGCACAAAGTAAAACAAACAATAATCTTCAAGAGTATAGTCAGGATCAAGAATTTGTAGATATTTACATTATGGGTAA
AAAGTACACTGTACCAAGTTCATTAACCATTATGAAAGCATTCGAATATGCAGGTTATACCTTGTTAAGAGGTTGTGGTT
GTAGGGCAGGCTTTTGCGGTGCTTGCTCAACTGTATATCGATTGGGAGGAGATCATGAATTAAAAGTAGGTTTGGCATGT
CAAACCAAAGTTGAAGATGACATGTATCTGACTCAAATTCCTTTTTATCCTTATCATAAGGTAACTTACGATTTAGATAC
TTTACAAGCTGATGGAAATCAGATTGTGGAAATATACCCTGAAATCGTGAAATGTTTAGGTTGTAATTCCTGTTCCAATG
TTTGTCCACAGGATATAAAAGTTATGAAGTACGTGTCTCATGCCATTAGAGGTGAGATATCGAAAGCTGCTGATGAATCC
TTTGATTGCTTAATGTGTGGGTTGTGTGCTTCTAAATGTCCTGCCAACATTGTTCAATATAAAGTGGGATTACTGTCCAG
GAGGTTATACGGTAAGTACTTGGCTCCCAAGGCCCAGCACGTTAAAGAAAGGATTTCTGAGATAGAATCAGGTAAATTCG
ATCAGGAGTTAAACGAGCTTGCCAATGCTAGCAAAGAAGAGCTGGCAGAACGATACAACAATCGAGAAATAGAAAAATAA

Upstream 100 bases:

>100_bases
TGAGGCGCTGTTATATTTAGCTGTTGATACTGTGAAGTTGAAATTTTACAGTTATCAACATTCAGCTTTAATACAGCTTA
AATTAAAGGAGGTAAATAAG

Downstream 100 bases:

>100_bases
GGAGGGCAGTTTAAAATGAGTTATACACCTGAAATGAGAGAATTGATAAAAAAAGTTGAAGAGACTAGAGATCAGAGGAT
AGGAAATTACTTCCCCAGGA

Product: ferredoxin

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAQSKTNNNLQEYSQDQEFVDIYIMGKKYTVPSSLTIMKAFEYAGYTLLRGCGCRAGFCGACSTVYRLGGDHELKVGLAC
QTKVEDDMYLTQIPFYPYHKVTYDLDTLQADGNQIVEIYPEIVKCLGCNSCSNVCPQDIKVMKYVSHAIRGEISKAADES
FDCLMCGLCASKCPANIVQYKVGLLSRRLYGKYLAPKAQHVKERISEIESGKFDQELNELANASKEELAERYNNREIEK

Sequences:

>Translated_239_residues
MAQSKTNNNLQEYSQDQEFVDIYIMGKKYTVPSSLTIMKAFEYAGYTLLRGCGCRAGFCGACSTVYRLGGDHELKVGLAC
QTKVEDDMYLTQIPFYPYHKVTYDLDTLQADGNQIVEIYPEIVKCLGCNSCSNVCPQDIKVMKYVSHAIRGEISKAADES
FDCLMCGLCASKCPANIVQYKVGLLSRRLYGKYLAPKAQHVKERISEIESGKFDQELNELANASKEELAERYNNREIEK
>Mature_238_residues
AQSKTNNNLQEYSQDQEFVDIYIMGKKYTVPSSLTIMKAFEYAGYTLLRGCGCRAGFCGACSTVYRLGGDHELKVGLACQ
TKVEDDMYLTQIPFYPYHKVTYDLDTLQADGNQIVEIYPEIVKCLGCNSCSNVCPQDIKVMKYVSHAIRGEISKAADESF
DCLMCGLCASKCPANIVQYKVGLLSRRLYGKYLAPKAQHVKERISEIESGKFDQELNELANASKEELAERYNNREIEK

Specific function: Unknown

COG id: COG0479

COG function: function code C; Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26909; Mature: 26778

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2 ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSKTNNNLQEYSQDQEFVDIYIMGKKYTVPSSLTIMKAFEYAGYTLLRGCGCRAGFCG
CCCCCCCCCHHHHHCCCCEEEEEEECCEEECCCHHHHHHHHHHHCHHHHHHCCCCCCHHH
ACSTVYRLGGDHELKVGLACQTKVEDDMYLTQIPFYPYHKVTYDLDTLQADGNQIVEIYP
HHHHHHHCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHEEEEHHHHHCCCCHHHHHHH
EIVKCLGCNSCSNVCPQDIKVMKYVSHAIRGEISKAADESFDCLMCGLCASKCPANIVQY
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
KVGLLSRRLYGKYLAPKAQHVKERISEIESGKFDQELNELANASKEELAERYNNREIEK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AQSKTNNNLQEYSQDQEFVDIYIMGKKYTVPSSLTIMKAFEYAGYTLLRGCGCRAGFCG
CCCCCCCCHHHHHCCCCEEEEEEECCEEECCCHHHHHHHHHHHCHHHHHHCCCCCCHHH
ACSTVYRLGGDHELKVGLACQTKVEDDMYLTQIPFYPYHKVTYDLDTLQADGNQIVEIYP
HHHHHHHCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHEEEEHHHHHCCCCHHHHHHH
EIVKCLGCNSCSNVCPQDIKVMKYVSHAIRGEISKAADESFDCLMCGLCASKCPANIVQY
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
KVGLLSRRLYGKYLAPKAQHVKERISEIESGKFDQELNELANASKEELAERYNNREIEK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA