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The map label for this gene is 188587217

Identifier: 188587217

GI number: 188587217

Start: 2812783

End: 2815374

Strand: Reverse

Name: 188587217

Synonym: Nther_2618

Alternate gene names: NA

Gene position: 2815374-2812783 (Counterclockwise)

Preceding gene: 188587218

Following gene: 188587216

Centisome position: 88.94

GC content: 35.76

Gene sequence:

>2592_bases
GTGGAAGAAATGGAGCTATTGTTTAGTTTCTTCGATGTACTTGAAACTACAGATAATGTAATGTCTGATATTCAAAATGT
TTTTGCCGCTTTATCTCTAATAGTGTTAATACCTGTATGGCTGTTTGGTTACAAATTATTTAAACTGTGGATTGCTTTTA
CAGGTTTTGTGATGGGCGGTTTGTTAAGTTCATCTATTACCTTTGCCTCAGTTGGACCTTCTACTGGTGCGGCGGGAATA
GCAGTAGTTGTGGGTATATTATTTGGTATTTTTGGTGCTTACATAGCATTAAAAGTGTATTTTTTAGGTGTGTTTTTGTC
AGTTTCTTTAGTAACAGGGCTCATTGCTCTAGCCTTAACCAGGGGAATGATTGAACTATCCGTGATTTTTGGAATAATTC
TTGGTATAGTGGCTGTTTATTTTGTCAAACCTTCGATAATCATTTCTACAGGGATTTCAGGAGGTTCTTCAGTAGCAGGT
GTAATAGCAGGAGTATTTGGTTTGAATATAGCCTTACAAATACTACTCTATCCCATTACTATAGCTTTTGGAATTTGGTT
TCAGTTTGTCACAAATAAAAGTAAAGATAAATCAACCTCAACTGATATAACTTCTGCAAATACTAAACATGAAACCCATG
AAAACCAAGATGAAAGTCACAGACATGAAAACATTGAAAAAGAAAACAATGAAAATAAAAAGCCGAGCAAAAGTGAAACC
GCGACTCACAGTAGATTAGCTGAAAGCAGTGACAGTGAAAATCTAGACAAAAAAGACGAGAAGGAAAGTAGCAATATAGA
TGACTTGACCTCTTCTATAGAGTCAGCAATTAATGATTTAGGAACTACTTTAAAAAGCAAATTAATAGAACTAAAAGAAT
ATATTGGTTATCGGTTGTCAAAAAACTCCAGAAAAACTAATCAAATTCTCTTGGGTAGCTTATCAGTTGTGGTTGTTGTG
GTTCTAATGTTTTTATTAATGATTATTACTGATCCGGGAGGGGCAGAAGAAGCACCCATGGTTGAAGATTTTTCTAGTCA
AAAAGATGAACGGGAGAAAGAACAGGAGAAAACAAAATCAGATAAAGATCAAACAGATAAAGATCAATCAGATGAAGATG
AATCACACGAAGATCAAGATGAACTAACATCTGAAAGTAACCAAGATCAAGACTCTAGTAGTTCAAAGATAAAACTATAC
AGTCAAGATGGTGGAGATAGTACAACAAGCCCGGAAAGGTATGATTCTATTCAAAAAGCAATTGAAATGGCACAATCAGG
GGACATAATCGAAATTTCTCCAGGTACCTATCAGGAAAATATCAACCTTGAAGGTAAAGATATTACGATATCAGGCCTTG
ACCCCCATAACGAAGAAAAGGTCCAAAAGACTGTAATTGATGGAGGAAGAACTGGGCCCATAGTAACTGCTTCAAATGGA
GAAGATGCAACAATCCAAGGTATTACCATTACTGGCGGTAGTGGGAAAAATTACGAAATCGGTAATTTGGAATATGATGT
AGGTGGTGGAATTTTGGTTAAAGACGGCTCCACTCTCCTACTAGAGAATAATATTATTACAGGAAACATTGATGGCGGAA
TTTTTGCTGGTCCTCAATCACAGCTGGATATCAAGAATAACTCTATTAGTAACAACAGTACCGAAAGACTAGGTGGGGCA
GGAATTTACGCTAAAGACAATACAAAACTTACTATTACTGATAGTACTATTACTGATAACAGTACCTACTCTAGTGGTGG
AGGAGTCTTTGCCAGGGATGAAGTAGAGCTTAGTCTTATAAATAATACTATTACCAAGAATTATTCAGGTGGTGATGGTG
GTGGAGTTTATAGTAGTTCCAATCATGATGTTGAGTTAAGAAACAATGACATTTCACGTAATGAAGGTTATTTTGGAGCT
GGCATCGCCTCTTACAGTGATCGGCAACTCACTTTAGTAAATAATGATATCAATCAGAATGAATCGCTCGATATAGGTGG
TGGCATTTTAATTGATGGTTCAGAAGCCATGATAGACAGTAACACTATCAATGAGAATGAAGCCGAATGTTCTGGAGGTG
CAATCCGTGCTGATAGGGCCATGGTAACTATTGATGGAAACGAAATCATTGGAAACTATGCCAGAACTGGTGGGGGAATT
TCTATCGTAAACAGATCTACAGGTGGAGGAGTAACTGAAAATGAAATTAGGGAAAATGATAGTGTCGGGGTTCATGTACA
CAATATAAAAGGACTTAATATTGAAGGCAACGATATTATAGGTCAAAAAAGAACAGGAATATATGCCTTAAATGAATCCG
ACTTGAAAATTGAAGATAATGTTATTAGTAATAATAAGACGGGCTTAGTTCTTTTTCACAAAACATTTAGTGAAATCACA
GATAATATTATCAAAGATCATGAAAAAACAGGTATTTTACTTGATAGAGAATCTGAAGCGGATATTCTAAGTAATGAAAT
TATCGATAATCAAGATAGTGGAATTCTTTATAGTCCCGATTCTAAAGCCAATACGGAAGATAACTCTTTTAGTGGAAATG
TCCCTGAAGATGTTGGCGAATTCGTTGAATAA

Upstream 100 bases:

>100_bases
CGAAGCAGCTTTTTATTTAGGTGCTGTTTTATAGAGTTGTTGATACTGTAAAATTTTCAATTGAACGGATTATGCGAGTT
ATCTAAAGGGGGTTCTTATA

Downstream 100 bases:

>100_bases
AGATCTACAAAGATCAACATTGCAAGCATATATTACTTATGATAAAATTTTCTTTAACTGAGTTAAAAACAAAATACGAG
TAATAGCTAGGTGCCTTTGT

Product: polymorphic outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 863; Mature: 863

Protein sequence:

>863_residues
MEEMELLFSFFDVLETTDNVMSDIQNVFAALSLIVLIPVWLFGYKLFKLWIAFTGFVMGGLLSSSITFASVGPSTGAAGI
AVVVGILFGIFGAYIALKVYFLGVFLSVSLVTGLIALALTRGMIELSVIFGIILGIVAVYFVKPSIIISTGISGGSSVAG
VIAGVFGLNIALQILLYPITIAFGIWFQFVTNKSKDKSTSTDITSANTKHETHENQDESHRHENIEKENNENKKPSKSET
ATHSRLAESSDSENLDKKDEKESSNIDDLTSSIESAINDLGTTLKSKLIELKEYIGYRLSKNSRKTNQILLGSLSVVVVV
VLMFLLMIITDPGGAEEAPMVEDFSSQKDEREKEQEKTKSDKDQTDKDQSDEDESHEDQDELTSESNQDQDSSSSKIKLY
SQDGGDSTTSPERYDSIQKAIEMAQSGDIIEISPGTYQENINLEGKDITISGLDPHNEEKVQKTVIDGGRTGPIVTASNG
EDATIQGITITGGSGKNYEIGNLEYDVGGGILVKDGSTLLLENNIITGNIDGGIFAGPQSQLDIKNNSISNNSTERLGGA
GIYAKDNTKLTITDSTITDNSTYSSGGGVFARDEVELSLINNTITKNYSGGDGGGVYSSSNHDVELRNNDISRNEGYFGA
GIASYSDRQLTLVNNDINQNESLDIGGGILIDGSEAMIDSNTINENEAECSGGAIRADRAMVTIDGNEIIGNYARTGGGI
SIVNRSTGGGVTENEIRENDSVGVHVHNIKGLNIEGNDIIGQKRTGIYALNESDLKIEDNVISNNKTGLVLFHKTFSEIT
DNIIKDHEKTGILLDRESEADILSNEIIDNQDSGILYSPDSKANTEDNSFSGNVPEDVGEFVE

Sequences:

>Translated_863_residues
MEEMELLFSFFDVLETTDNVMSDIQNVFAALSLIVLIPVWLFGYKLFKLWIAFTGFVMGGLLSSSITFASVGPSTGAAGI
AVVVGILFGIFGAYIALKVYFLGVFLSVSLVTGLIALALTRGMIELSVIFGIILGIVAVYFVKPSIIISTGISGGSSVAG
VIAGVFGLNIALQILLYPITIAFGIWFQFVTNKSKDKSTSTDITSANTKHETHENQDESHRHENIEKENNENKKPSKSET
ATHSRLAESSDSENLDKKDEKESSNIDDLTSSIESAINDLGTTLKSKLIELKEYIGYRLSKNSRKTNQILLGSLSVVVVV
VLMFLLMIITDPGGAEEAPMVEDFSSQKDEREKEQEKTKSDKDQTDKDQSDEDESHEDQDELTSESNQDQDSSSSKIKLY
SQDGGDSTTSPERYDSIQKAIEMAQSGDIIEISPGTYQENINLEGKDITISGLDPHNEEKVQKTVIDGGRTGPIVTASNG
EDATIQGITITGGSGKNYEIGNLEYDVGGGILVKDGSTLLLENNIITGNIDGGIFAGPQSQLDIKNNSISNNSTERLGGA
GIYAKDNTKLTITDSTITDNSTYSSGGGVFARDEVELSLINNTITKNYSGGDGGGVYSSSNHDVELRNNDISRNEGYFGA
GIASYSDRQLTLVNNDINQNESLDIGGGILIDGSEAMIDSNTINENEAECSGGAIRADRAMVTIDGNEIIGNYARTGGGI
SIVNRSTGGGVTENEIRENDSVGVHVHNIKGLNIEGNDIIGQKRTGIYALNESDLKIEDNVISNNKTGLVLFHKTFSEIT
DNIIKDHEKTGILLDRESEADILSNEIIDNQDSGILYSPDSKANTEDNSFSGNVPEDVGEFVE
>Mature_863_residues
MEEMELLFSFFDVLETTDNVMSDIQNVFAALSLIVLIPVWLFGYKLFKLWIAFTGFVMGGLLSSSITFASVGPSTGAAGI
AVVVGILFGIFGAYIALKVYFLGVFLSVSLVTGLIALALTRGMIELSVIFGIILGIVAVYFVKPSIIISTGISGGSSVAG
VIAGVFGLNIALQILLYPITIAFGIWFQFVTNKSKDKSTSTDITSANTKHETHENQDESHRHENIEKENNENKKPSKSET
ATHSRLAESSDSENLDKKDEKESSNIDDLTSSIESAINDLGTTLKSKLIELKEYIGYRLSKNSRKTNQILLGSLSVVVVV
VLMFLLMIITDPGGAEEAPMVEDFSSQKDEREKEQEKTKSDKDQTDKDQSDEDESHEDQDELTSESNQDQDSSSSKIKLY
SQDGGDSTTSPERYDSIQKAIEMAQSGDIIEISPGTYQENINLEGKDITISGLDPHNEEKVQKTVIDGGRTGPIVTASNG
EDATIQGITITGGSGKNYEIGNLEYDVGGGILVKDGSTLLLENNIITGNIDGGIFAGPQSQLDIKNNSISNNSTERLGGA
GIYAKDNTKLTITDSTITDNSTYSSGGGVFARDEVELSLINNTITKNYSGGDGGGVYSSSNHDVELRNNDISRNEGYFGA
GIASYSDRQLTLVNNDINQNESLDIGGGILIDGSEAMIDSNTINENEAECSGGAIRADRAMVTIDGNEIIGNYARTGGGI
SIVNRSTGGGVTENEIRENDSVGVHVHNIKGLNIEGNDIIGQKRTGIYALNESDLKIEDNVISNNKTGLVLFHKTFSEIT
DNIIKDHEKTGILLDRESEADILSNEIIDNQDSGILYSPDSKANTEDNSFSGNVPEDVGEFVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI30089926, Length=374, Percent_Identity=24.331550802139, Blast_Score=71, Evalue=5e-12,
Organism=Homo sapiens, GI298231105, Length=374, Percent_Identity=24.331550802139, Blast_Score=70, Evalue=8e-12,
Organism=Homo sapiens, GI124244083, Length=383, Percent_Identity=25.3263707571802, Blast_Score=67, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24645532, Length=373, Percent_Identity=23.8605898123324, Blast_Score=67, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92907; Mature: 92907

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEMELLFSFFDVLETTDNVMSDIQNVFAALSLIVLIPVWLFGYKLFKLWIAFTGFVMGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSSSITFASVGPSTGAAGIAVVVGILFGIFGAYIALKVYFLGVFLSVSLVTGLIALALT
HHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGMIELSVIFGIILGIVAVYFVKPSIIISTGISGGSSVAGVIAGVFGLNIALQILLYPIT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAFGIWFQFVTNKSKDKSTSTDITSANTKHETHENQDESHRHENIEKENNENKKPSKSET
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCHHH
ATHSRLAESSDSENLDKKDEKESSNIDDLTSSIESAINDLGTTLKSKLIELKEYIGYRLS
HHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEC
KNSRKTNQILLGSLSVVVVVVLMFLLMIITDPGGAEEAPMVEDFSSQKDEREKEQEKTKS
CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
DKDQTDKDQSDEDESHEDQDELTSESNQDQDSSSSKIKLYSQDGGDSTTSPERYDSIQKA
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH
IEMAQSGDIIEISPGTYQENINLEGKDITISGLDPHNEEKVQKTVIDGGRTGPIVTASNG
HHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCC
EDATIQGITITGGSGKNYEIGNLEYDVGGGILVKDGSTLLLENNIITGNIDGGIFAGPQS
CCCEEEEEEEECCCCCCEECCCEEEECCCEEEEECCCEEEEECCEEEECCCCCEEECCCC
QLDIKNNSISNNSTERLGGAGIYAKDNTKLTITDSTITDNSTYSSGGGVFARDEVELSLI
CEEECCCCCCCCCHHHCCCCEEEECCCCEEEEEECEECCCCCCCCCCCEEEECCEEEEEE
NNTITKNYSGGDGGGVYSSSNHDVELRNNDISRNEGYFGAGIASYSDRQLTLVNNDINQN
HHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCC
ESLDIGGGILIDGSEAMIDSNTINENEAECSGGAIRADRAMVTIDGNEIIGNYARTGGGI
CCEECCCEEEECCCCCEEECCCCCCCCCCCCCCCEEECCEEEEECCCHHHCCHHHCCCCE
SIVNRSTGGGVTENEIRENDSVGVHVHNIKGLNIEGNDIIGQKRTGIYALNESDLKIEDN
EEEEECCCCCCCHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEECC
VISNNKTGLVLFHKTFSEITDNIIKDHEKTGILLDRESEADILSNEIIDNQDSGILYSPD
EECCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEECCC
SKANTEDNSFSGNVPEDVGEFVE
CCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MEEMELLFSFFDVLETTDNVMSDIQNVFAALSLIVLIPVWLFGYKLFKLWIAFTGFVMGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSSSITFASVGPSTGAAGIAVVVGILFGIFGAYIALKVYFLGVFLSVSLVTGLIALALT
HHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGMIELSVIFGIILGIVAVYFVKPSIIISTGISGGSSVAGVIAGVFGLNIALQILLYPIT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAFGIWFQFVTNKSKDKSTSTDITSANTKHETHENQDESHRHENIEKENNENKKPSKSET
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCHHH
ATHSRLAESSDSENLDKKDEKESSNIDDLTSSIESAINDLGTTLKSKLIELKEYIGYRLS
HHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEC
KNSRKTNQILLGSLSVVVVVVLMFLLMIITDPGGAEEAPMVEDFSSQKDEREKEQEKTKS
CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
DKDQTDKDQSDEDESHEDQDELTSESNQDQDSSSSKIKLYSQDGGDSTTSPERYDSIQKA
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH
IEMAQSGDIIEISPGTYQENINLEGKDITISGLDPHNEEKVQKTVIDGGRTGPIVTASNG
HHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCC
EDATIQGITITGGSGKNYEIGNLEYDVGGGILVKDGSTLLLENNIITGNIDGGIFAGPQS
CCCEEEEEEEECCCCCCEECCCEEEECCCEEEEECCCEEEEECCEEEECCCCCEEECCCC
QLDIKNNSISNNSTERLGGAGIYAKDNTKLTITDSTITDNSTYSSGGGVFARDEVELSLI
CEEECCCCCCCCCHHHCCCCEEEECCCCEEEEEECEECCCCCCCCCCCEEEECCEEEEEE
NNTITKNYSGGDGGGVYSSSNHDVELRNNDISRNEGYFGAGIASYSDRQLTLVNNDINQN
HHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCC
ESLDIGGGILIDGSEAMIDSNTINENEAECSGGAIRADRAMVTIDGNEIIGNYARTGGGI
CCEECCCEEEECCCCCEEECCCCCCCCCCCCCCCEEECCEEEEECCCHHHCCHHHCCCCE
SIVNRSTGGGVTENEIRENDSVGVHVHNIKGLNIEGNDIIGQKRTGIYALNESDLKIEDN
EEEEECCCCCCCHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEECC
VISNNKTGLVLFHKTFSEITDNIIKDHEKTGILLDRESEADILSNEIIDNQDSGILYSPD
EECCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEECCC
SKANTEDNSFSGNVPEDVGEFVE
CCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA