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The map label for this gene is ydiF [H]

Identifier: 188587198

GI number: 188587198

Start: 2791153

End: 2792727

Strand: Reverse

Name: ydiF [H]

Synonym: Nther_2599

Alternate gene names: 188587198

Gene position: 2792727-2791153 (Counterclockwise)

Preceding gene: 188587199

Following gene: 188587197

Centisome position: 88.22

GC content: 43.11

Gene sequence:

>1575_bases
ATGAAAAAACTTTTTAGTGCTCAAGAAGCTATAAAATTCATTGAAAACGATAGCACATTAGCAGTAGGCGGATTTGTAGG
CTGTGGACACCCGGAAGAATTAACAGTTGCCTTAGAACAACAATTCAAAACAGAAGGAAAACCCAAAAATTTGACTTTGG
TCTATGCAGCAGGACAAGGTAATAGCCGGGACAAAGGCCTGAACCATTTAGCTCATGAAGGTCTTGTTAAAAGAATCATT
GGAGGGCACTGGGGTTTGTGTCCGGGATTGGGCAAACTAGCTTTGGAAAACAAAATTGAAGGATACAATCTCCCCCAAGG
AGTTGTGGCCCATTTATTCAGGGACATCGCAGCAAACAAGCCGGGGACACTCACTCATGTCGGTTTAGAAACCTTTGTAG
ATCCCAGAAACCAGGGCGGAAAAGTAAATGATGTGACCAAAGAAGATATTATTGAGCTTATGGAAATTGGAGGTCAGGAA
TGGTTATTCTACAAGGCCTTTCCCATTAATGCAGCATTTCTAAGAGGGACCTCAGCTGATGAAAAAGGCAATATCTCAAT
GGAAAAAGAAGCAGTCACTCTGGAAATGAGGGCAATAGCCCAAGCTGTCAAAAATTCAGGGGGTAAAGTGATCTGCCAGG
TGGAAAGGATTGTACAGAAAAGTACTCTCGATCCGCAAAAGGTTGAAATACCTGGGATTCTAGTTGATGCAGTCGTTGTG
GCCTCTGAGAATAACCATCAGCAGACCTTTGCCGAAAATTACAATCCTGCCTATTCAGGAGAAATTAGAGAACTAGGAAA
TTTAGGAAATGGCTGCGGCTCAACCCAGGCTCAGGCTAAATTAGATGAGAGAAAAATTATATCCAGAAGAAGTGTCATGG
AGCTAAAGCCAGATTCTACAGTTAACCTGGGAATAGGAATGCCCGAGGGAGTAGCCCAGGTAGCAGCAGAAGAGGAAATT
TATCATTATATGGACTTGACCGTAGAGTCCGGACCCATAGGAGGTGTACCGGTAGGAGGCTTGAATTTTGGGGCTTCCAA
AAATCCCGAAGCAATTATCGACCAGCCCAGTCAGTTTGACTTTTACGATGGTGGTGGGCTCGACTTGGCTTTCCTAGGAG
CTGCCCAGATAGACCAAACAGGGAATGTCAATGTCAGCAAATTTGGACCCAAGCTGGCAGGAGCAGGAGGATTTATAAAT
ATCACACAAAATTCACAAGAAGTCATCTATTGCGGCACATTTACAGCAGGAGGCCTGGAGGTTGAGGTTAAAGATGGGAA
GCTAAACATTATCAAGGAAGGCAAAAATATTAAATTTGTCAACAATGTGGAGCAAATCACTTTCAGTGGCAATTACGCTA
GAAAAACAGGGCAAAAGGTTCTGTATGTTACGGAAAGGGCTGTCTTTTCCCTGGTCGACGAAGGGCTTGAACTCATCGAG
ATAGCCCCGGGGATCGACCTGGAACGGGATGTGTTGGACAAGATGGAGTTCAGACCGAAAATATCTAACAACTTACAGAC
CATGGATGAAAGTATTTTTAAAGATATGAAAATGGGATTAAAATATAAAATTTAA

Upstream 100 bases:

>100_bases
AAATGGATAAAAGAGATATAAAAGAGATATAAAAAGAAATGATGTATCCCCGGAAGAAAGTTAAGAAGAATAAAAGTATT
AGAAAGAGGAGCGATTTGCC

Downstream 100 bases:

>100_bases
GTTATTAAATTAAAAGTCGTGAAATCAATAAAAGTTAAGGGGGTAAATCGTATGCGCTTAAAAGATAAGGTGGCCATTAT
AACCGGAGGTGGCAGTGGAA

Product: propionate CoA-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MKKLFSAQEAIKFIENDSTLAVGGFVGCGHPEELTVALEQQFKTEGKPKNLTLVYAAGQGNSRDKGLNHLAHEGLVKRII
GGHWGLCPGLGKLALENKIEGYNLPQGVVAHLFRDIAANKPGTLTHVGLETFVDPRNQGGKVNDVTKEDIIELMEIGGQE
WLFYKAFPINAAFLRGTSADEKGNISMEKEAVTLEMRAIAQAVKNSGGKVICQVERIVQKSTLDPQKVEIPGILVDAVVV
ASENNHQQTFAENYNPAYSGEIRELGNLGNGCGSTQAQAKLDERKIISRRSVMELKPDSTVNLGIGMPEGVAQVAAEEEI
YHYMDLTVESGPIGGVPVGGLNFGASKNPEAIIDQPSQFDFYDGGGLDLAFLGAAQIDQTGNVNVSKFGPKLAGAGGFIN
ITQNSQEVIYCGTFTAGGLEVEVKDGKLNIIKEGKNIKFVNNVEQITFSGNYARKTGQKVLYVTERAVFSLVDEGLELIE
IAPGIDLERDVLDKMEFRPKISNNLQTMDESIFKDMKMGLKYKI

Sequences:

>Translated_524_residues
MKKLFSAQEAIKFIENDSTLAVGGFVGCGHPEELTVALEQQFKTEGKPKNLTLVYAAGQGNSRDKGLNHLAHEGLVKRII
GGHWGLCPGLGKLALENKIEGYNLPQGVVAHLFRDIAANKPGTLTHVGLETFVDPRNQGGKVNDVTKEDIIELMEIGGQE
WLFYKAFPINAAFLRGTSADEKGNISMEKEAVTLEMRAIAQAVKNSGGKVICQVERIVQKSTLDPQKVEIPGILVDAVVV
ASENNHQQTFAENYNPAYSGEIRELGNLGNGCGSTQAQAKLDERKIISRRSVMELKPDSTVNLGIGMPEGVAQVAAEEEI
YHYMDLTVESGPIGGVPVGGLNFGASKNPEAIIDQPSQFDFYDGGGLDLAFLGAAQIDQTGNVNVSKFGPKLAGAGGFIN
ITQNSQEVIYCGTFTAGGLEVEVKDGKLNIIKEGKNIKFVNNVEQITFSGNYARKTGQKVLYVTERAVFSLVDEGLELIE
IAPGIDLERDVLDKMEFRPKISNNLQTMDESIFKDMKMGLKYKI
>Mature_524_residues
MKKLFSAQEAIKFIENDSTLAVGGFVGCGHPEELTVALEQQFKTEGKPKNLTLVYAAGQGNSRDKGLNHLAHEGLVKRII
GGHWGLCPGLGKLALENKIEGYNLPQGVVAHLFRDIAANKPGTLTHVGLETFVDPRNQGGKVNDVTKEDIIELMEIGGQE
WLFYKAFPINAAFLRGTSADEKGNISMEKEAVTLEMRAIAQAVKNSGGKVICQVERIVQKSTLDPQKVEIPGILVDAVVV
ASENNHQQTFAENYNPAYSGEIRELGNLGNGCGSTQAQAKLDERKIISRRSVMELKPDSTVNLGIGMPEGVAQVAAEEEI
YHYMDLTVESGPIGGVPVGGLNFGASKNPEAIIDQPSQFDFYDGGGLDLAFLGAAQIDQTGNVNVSKFGPKLAGAGGFIN
ITQNSQEVIYCGTFTAGGLEVEVKDGKLNIIKEGKNIKFVNNVEQITFSGNYARKTGQKVLYVTERAVFSLVDEGLELIE
IAPGIDLERDVLDKMEFRPKISNNLQTMDESIFKDMKMGLKYKI

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=502, Percent_Identity=25.4980079681275, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI11545841, Length=421, Percent_Identity=25.8907363420428, Blast_Score=76, Evalue=1e-13,
Organism=Escherichia coli, GI1787985, Length=518, Percent_Identity=46.3320463320463, Blast_Score=468, Evalue=1e-133,
Organism=Escherichia coli, GI1788551, Length=242, Percent_Identity=25.2066115702479, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531517, Length=534, Percent_Identity=26.4044943820225, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI21358325, Length=529, Percent_Identity=24.952741020794, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24655794, Length=529, Percent_Identity=24.952741020794, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 56808; Mature: 56808

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFSAQEAIKFIENDSTLAVGGFVGCGHPEELTVALEQQFKTEGKPKNLTLVYAAGQG
CCCHHHHHHHHHHHCCCCEEEEECEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NSRDKGLNHLAHEGLVKRIIGGHWGLCPGLGKLALENKIEGYNLPQGVVAHLFRDIAANK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PGTLTHVGLETFVDPRNQGGKVNDVTKEDIIELMEIGGQEWLFYKAFPINAAFLRGTSAD
CCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCC
EKGNISMEKEAVTLEMRAIAQAVKNSGGKVICQVERIVQKSTLDPQKVEIPGILVDAVVV
CCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCEEECCCEEEEEEEE
ASENNHQQTFAENYNPAYSGEIRELGNLGNGCGSTQAQAKLDERKIISRRSVMELKPDST
ECCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCE
VNLGIGMPEGVAQVAAEEEIYHYMDLTVESGPIGGVPVGGLNFGASKNPEAIIDQPSQFD
EEECCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCEECCCCCCCCCCCCHHCCCCCCCCC
FYDGGGLDLAFLGAAQIDQTGNVNVSKFGPKLAGAGGFINITQNSQEVIYCGTFTAGGLE
CCCCCCCEEEEECCHHCCCCCCEEHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEE
VEVKDGKLNIIKEGKNIKFVNNVEQITFSGNYARKTGQKVLYVTERAVFSLVDEGLELIE
EEEECCEEEEEECCCCEEEECCCEEEEECCCCHHHCCCEEEEEEHHHHHHHHHCCCEEEE
IAPGIDLERDVLDKMEFRPKISNNLQTMDESIFKDMKMGLKYKI
ECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MKKLFSAQEAIKFIENDSTLAVGGFVGCGHPEELTVALEQQFKTEGKPKNLTLVYAAGQG
CCCHHHHHHHHHHHCCCCEEEEECEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NSRDKGLNHLAHEGLVKRIIGGHWGLCPGLGKLALENKIEGYNLPQGVVAHLFRDIAANK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PGTLTHVGLETFVDPRNQGGKVNDVTKEDIIELMEIGGQEWLFYKAFPINAAFLRGTSAD
CCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCC
EKGNISMEKEAVTLEMRAIAQAVKNSGGKVICQVERIVQKSTLDPQKVEIPGILVDAVVV
CCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCEEECCCEEEEEEEE
ASENNHQQTFAENYNPAYSGEIRELGNLGNGCGSTQAQAKLDERKIISRRSVMELKPDST
ECCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCE
VNLGIGMPEGVAQVAAEEEIYHYMDLTVESGPIGGVPVGGLNFGASKNPEAIIDQPSQFD
EEECCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCEECCCCCCCCCCCCHHCCCCCCCCC
FYDGGGLDLAFLGAAQIDQTGNVNVSKFGPKLAGAGGFINITQNSQEVIYCGTFTAGGLE
CCCCCCCEEEEECCHHCCCCCCEEHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEE
VEVKDGKLNIIKEGKNIKFVNNVEQITFSGNYARKTGQKVLYVTERAVFSLVDEGLELIE
EEEECCEEEEEECCCCEEEECCCEEEEECCCCHHHCCCEEEEEEHHHHHHHHHCCCEEEE
IAPGIDLERDVLDKMEFRPKISNNLQTMDESIFKDMKMGLKYKI
ECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]