| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is gtaB [H]
Identifier: 188587140
GI number: 188587140
Start: 2733632
End: 2734510
Strand: Reverse
Name: gtaB [H]
Synonym: Nther_2537
Alternate gene names: 188587140
Gene position: 2734510-2733632 (Counterclockwise)
Preceding gene: 188587142
Following gene: 188587139
Centisome position: 86.38
GC content: 39.59
Gene sequence:
>879_bases ATGACAAAAGTAAGAAAAGCGGTGATTCCGGCAGCGGGTCTCGGAACTAGGTTTTTACCTGCTACCAAAGCCCAACCCAA AGAGATGCTTCCTATACTAGATAAACCGACAATTCAGTATATTATAGAAGAAGCTGTGGAATCTGGAGTAGAAGACATAT TAATCATCACTGGTAGGGGTAAGCGTGCCATAGAAGATCACTTCGATAGAGCTATAGAGTTGGAAGAAACCTTAGAGGAA AAAGGGAAACAAGATCTACTAGAAAAAGTAAGAGAGACTAATGAAATAGATATCCATTACATAAGACAGAAAGAACCCTT AGGACTTGGACATGCAGTGCTTTGTGCTAAGAAGTTCATCGGAAATGAACCTTTTGGTGTTTTACTCGGTGATGACATAG TCAGAAATGGTGGGGGAGCCCCCTGCTTGAAACAGATGATAGATTTATATGAACAGGAAGATGCTAGTGTCATAGGAGTA CAGGAAGTGCCTGAACAAGATGTAAGCCGTTATGGTATAGTAGAAAACGGTGCTGAAGTTTCTAAAGGAGCTTATCAGGT AAATCAATTAATTGAAAAACCTCCGGTAGAGAAAGCACCTTCCAGGTTAGCTATTATGGGAAGGTATGTTATCAGTCCTA CAATTTTTGACTACCTTGAAAAAACTGGCCCTGGAAGCGGAGGGGAAATTCAGTTGACTGATGCTTTAAATGATCTTGCC AAGGTAGAAAAGGTCTACGCCTATCCTTTTAAAGGAACTAGATATGATGCTGGAGATTTGTTAGGATATTTAAAGACAAC GGTAGAATTTGCCTTGGAGCGAGAAGATGTTAAAGATGAATTTAAGGAATACTTGAAGTCTAGGTTTGGTCAAATATAA
Upstream 100 bases:
>100_bases GGTTAGCTTCTTTTACAATCAGAAGCGGTGTAAAAAGGGCTAACCTTTTTTATATACGTATGTTGCGCACTTGCAACAGT TTTAAAGGAGGCCGAGATCA
Downstream 100 bases:
>100_bases TTTAAGTGAAGGTGAGTATAATGTATAAAATATCTGTCATTGGTACAGGGTATGTGGGTTTGTCAACAGGAGTTTGTCTA TCTGATATGGGTAACCAAGT
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTKVRKAVIPAAGLGTRFLPATKAQPKEMLPILDKPTIQYIIEEAVESGVEDILIITGRGKRAIEDHFDRAIELEETLEE KGKQDLLEKVRETNEIDIHYIRQKEPLGLGHAVLCAKKFIGNEPFGVLLGDDIVRNGGGAPCLKQMIDLYEQEDASVIGV QEVPEQDVSRYGIVENGAEVSKGAYQVNQLIEKPPVEKAPSRLAIMGRYVISPTIFDYLEKTGPGSGGEIQLTDALNDLA KVEKVYAYPFKGTRYDAGDLLGYLKTTVEFALEREDVKDEFKEYLKSRFGQI
Sequences:
>Translated_292_residues MTKVRKAVIPAAGLGTRFLPATKAQPKEMLPILDKPTIQYIIEEAVESGVEDILIITGRGKRAIEDHFDRAIELEETLEE KGKQDLLEKVRETNEIDIHYIRQKEPLGLGHAVLCAKKFIGNEPFGVLLGDDIVRNGGGAPCLKQMIDLYEQEDASVIGV QEVPEQDVSRYGIVENGAEVSKGAYQVNQLIEKPPVEKAPSRLAIMGRYVISPTIFDYLEKTGPGSGGEIQLTDALNDLA KVEKVYAYPFKGTRYDAGDLLGYLKTTVEFALEREDVKDEFKEYLKSRFGQI >Mature_291_residues TKVRKAVIPAAGLGTRFLPATKAQPKEMLPILDKPTIQYIIEEAVESGVEDILIITGRGKRAIEDHFDRAIELEETLEEK GKQDLLEKVRETNEIDIHYIRQKEPLGLGHAVLCAKKFIGNEPFGVLLGDDIVRNGGGAPCLKQMIDLYEQEDASVIGVQ EVPEQDVSRYGIVENGAEVSKGAYQVNQLIEKPPVEKAPSRLAIMGRYVISPTIFDYLEKTGPGSGGEIQLTDALNDLAK VEKVYAYPFKGTRYDAGDLLGYLKTTVEFALEREDVKDEFKEYLKSRFGQI
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=296, Percent_Identity=44.5945945945946, Blast_Score=240, Evalue=9e-65, Organism=Escherichia coli, GI1788355, Length=275, Percent_Identity=41.8181818181818, Blast_Score=207, Evalue=5e-55, Organism=Escherichia coli, GI1790224, Length=230, Percent_Identity=31.7391304347826, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32486; Mature: 32354
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVRKAVIPAAGLGTRFLPATKAQPKEMLPILDKPTIQYIIEEAVESGVEDILIITGRG CCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC KRAIEDHFDRAIELEETLEEKGKQDLLEKVRETNEIDIHYIRQKEPLGLGHAVLCAKKFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH GNEPFGVLLGDDIVRNGGGAPCLKQMIDLYEQEDASVIGVQEVPEQDVSRYGIVENGAEV CCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCEECHHHCCHHHHHHCCCCCCCCHH SKGAYQVNQLIEKPPVEKAPSRLAIMGRYVISPTIFDYLEKTGPGSGGEIQLTDALNDLA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH KVEKVYAYPFKGTRYDAGDLLGYLKTTVEFALEREDVKDEFKEYLKSRFGQI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKVRKAVIPAAGLGTRFLPATKAQPKEMLPILDKPTIQYIIEEAVESGVEDILIITGRG CCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC KRAIEDHFDRAIELEETLEEKGKQDLLEKVRETNEIDIHYIRQKEPLGLGHAVLCAKKFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH GNEPFGVLLGDDIVRNGGGAPCLKQMIDLYEQEDASVIGVQEVPEQDVSRYGIVENGAEV CCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHCCCCEECHHHCCHHHHHHCCCCCCCCHH SKGAYQVNQLIEKPPVEKAPSRLAIMGRYVISPTIFDYLEKTGPGSGGEIQLTDALNDLA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH KVEKVYAYPFKGTRYDAGDLLGYLKTTVEFALEREDVKDEFKEYLKSRFGQI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]