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The map label for this gene is tnpA1 [H]

Identifier: 188587093

GI number: 188587093

Start: 2674688

End: 2675089

Strand: Reverse

Name: tnpA1 [H]

Synonym: Nther_2487

Alternate gene names: 188587093

Gene position: 2675089-2674688 (Counterclockwise)

Preceding gene: 188587094

Following gene: 188587092

Centisome position: 84.51

GC content: 35.57

Gene sequence:

>402_bases
ATGAGTAAAAATAGATGGACTACAACCAAAACAACTGTATACAATTTAGGTTATCATATCATTTTTTGCCCCAAATATAG
ACGTGAAGTACTGACTGGCAAAATTGAACAGCGATTAAAGCAATTATTTTTAGAGAAAGCCAATGAGCTAGAGATAGAAA
TTCAAGATTTAACTATTATGCCAGATCATGTTCATTTGTTTATCAAAGCAGACCCCACTTTAGCACCACACTATATTGTG
CGACAACTGAAAGGATATAGTGCCAAAATTCTTCGTAAGGAGTTTCCTGAACTAAAATCAAGGCTGCCTTCACTCTGGAC
TCGTAGTTATTATGTTGAGTCGGTCGGTCATATATCAGAAGATACTATTCGTAAATATATCGAAGACCAGGAGGGTAAAT
AG

Upstream 100 bases:

>100_bases
TTACGAAAAAACCAAACAGAAAGCCCACTGCTTTAGCTGTGGGATGAATGTTTATTATTAACTGTTTGCCAACTATCTAT
TTTTTTATTATAATAAAAAT

Downstream 100 bases:

>100_bases
TGATTATAACTAAAACCTATAAGTATAAGTTATACGAGTCAAAAAAGAATAAAAATATTCATCAGAAAATAGATATAGCT
GGTCTTATCTATAATCATTG

Product: transposase IS200-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSKNRWTTTKTTVYNLGYHIIFCPKYRREVLTGKIEQRLKQLFLEKANELEIEIQDLTIMPDHVHLFIKADPTLAPHYIV
RQLKGYSAKILRKEFPELKSRLPSLWTRSYYVESVGHISEDTIRKYIEDQEGK

Sequences:

>Translated_133_residues
MSKNRWTTTKTTVYNLGYHIIFCPKYRREVLTGKIEQRLKQLFLEKANELEIEIQDLTIMPDHVHLFIKADPTLAPHYIV
RQLKGYSAKILRKEFPELKSRLPSLWTRSYYVESVGHISEDTIRKYIEDQEGK
>Mature_132_residues
SKNRWTTTKTTVYNLGYHIIFCPKYRREVLTGKIEQRLKQLFLEKANELEIEIQDLTIMPDHVHLFIKADPTLAPHYIVR
QLKGYSAKILRKEFPELKSRLPSLWTRSYYVESVGHISEDTIRKYIEDQEGK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 15826; Mature: 15694

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNRWTTTKTTVYNLGYHIIFCPKYRREVLTGKIEQRLKQLFLEKANELEIEIQDLTIM
CCCCCCCCHHEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
PDHVHLFIKADPTLAPHYIVRQLKGYSAKILRKEFPELKSRLPSLWTRSYYVESVGHISE
CCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DTIRKYIEDQEGK
HHHHHHHHCCCCC
>Mature Secondary Structure 
SKNRWTTTKTTVYNLGYHIIFCPKYRREVLTGKIEQRLKQLFLEKANELEIEIQDLTIM
CCCCCCCHHEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
PDHVHLFIKADPTLAPHYIVRQLKGYSAKILRKEFPELKSRLPSLWTRSYYVESVGHISE
CCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DTIRKYIEDQEGK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]