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The map label for this gene is yheN [H]

Identifier: 188586907

GI number: 188586907

Start: 2442980

End: 2444098

Strand: Direct

Name: yheN [H]

Synonym: Nther_2298

Alternate gene names: 188586907

Gene position: 2442980-2444098 (Clockwise)

Preceding gene: 188586899

Following gene: 188586910

Centisome position: 77.17

GC content: 41.02

Gene sequence:

>1119_bases
ATGAAATTGCCAAAATTTACGTTGTTAATCATTACTATGTTAGCACTTCTGACAGTCTCTGCTAATCTAGTAGATCCCCC
GATCACAGAAGCTGCCACAAAACAGAGTACTCAGAACCAGGGAGGCGTGGTTGAACAGATCCACATCGTAGTAGACGACA
CAGCTTTAGAGACACCAGGTAGATTGCAAAATGGTAGAACTATGGTACCGCTAAGGGGCGTTTTTGAACAGGTTGGAGCC
AGCGTCAACTGGGACAGTGAAGAGGAGATTATCACCATTATCAAAGATTGGGATAGATTAGAATTAAGCCCTGGTACTAA
AAAAGCTGAAAAAAATTATGATGAAATAATAAAATTGGAAGAGGCACCATTCACCAGTAGGGGAACTACCTGGCTCCCCT
TGAGAGCCATTGGAGAATTGTTCGACTTAGATGTAGATTGGGTTAGTGAGCACGATTTAGTAAGGATTAGTACAGGTGAA
CAAGAAAAAGATATTGGAAAAATTGCTGAAGATTTAAAACCAATTGAGACAGATCAAAGTGGTAAAGTTGTCTACTTAAC
CTTCGATGATGGTCCCAGTCATATTACACCTGAAGTTTTGGATATCCTGGACGAGTACAATGCCAGGGCAACTTTTTTCG
TGATTGGTCAACAGGCGGAAGCCATGCCACATATTATTCGAAGAATCCACAATGAAGGCCATCTAATTGCTAATCACAGT
TATACCCACGATTATGATAAAGTTTACGATTCTCCCGAATCCTTTGAAGAGGAATTATTAAAAACGGAGGAAGTAATCAA
AGATATCACAGGGAAAAGAACCACAATATTTCGACCACCGGGTGGAGAACATCCTAATATGACCGATGAAAAAAGAGAAA
TTCTACAAGAACACGGCTACACCTTATATAACTGGAGTGTGTCGGCTGGAGATACTGCCACTCCTACGCCAAGCTCTGAA
GTTATAAAAAATAATGTACTGGGTGGAGTGCGAGGCAGTAATGGAGCTGTTGTATTGATGCACGATTCAGCAAGTAGAGA
AAACACTAAAAAAGCCCTCTCAGAAATTCTGAGAGAGCTCAGCTTCGAAGGTTATAGTTTCCCCACCTTACCACAATAA

Upstream 100 bases:

>100_bases
TTTGTTATTTTATGTAATTTTTTAGTATTTCCCATTAACAATATTTTATTCAATTCTAAAGTAAAATATTCAATATTTTT
TTGAAGGAGGAGAGTATAAA

Downstream 100 bases:

>100_bases
TTTTTCTCCAGGCCCAAATGGCCAATAAAATCATAATTAAGGACAAGGGGAGCAGATGTAACAGCTCCCCTCCTCTTATT
CCGGTACCTGCCGCCATGAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKLPKFTLLIITMLALLTVSANLVDPPITEAATKQSTQNQGGVVEQIHIVVDDTALETPGRLQNGRTMVPLRGVFEQVGA
SVNWDSEEEIITIIKDWDRLELSPGTKKAEKNYDEIIKLEEAPFTSRGTTWLPLRAIGELFDLDVDWVSEHDLVRISTGE
QEKDIGKIAEDLKPIETDQSGKVVYLTFDDGPSHITPEVLDILDEYNARATFFVIGQQAEAMPHIIRRIHNEGHLIANHS
YTHDYDKVYDSPESFEEELLKTEEVIKDITGKRTTIFRPPGGEHPNMTDEKREILQEHGYTLYNWSVSAGDTATPTPSSE
VIKNNVLGGVRGSNGAVVLMHDSASRENTKKALSEILRELSFEGYSFPTLPQ

Sequences:

>Translated_372_residues
MKLPKFTLLIITMLALLTVSANLVDPPITEAATKQSTQNQGGVVEQIHIVVDDTALETPGRLQNGRTMVPLRGVFEQVGA
SVNWDSEEEIITIIKDWDRLELSPGTKKAEKNYDEIIKLEEAPFTSRGTTWLPLRAIGELFDLDVDWVSEHDLVRISTGE
QEKDIGKIAEDLKPIETDQSGKVVYLTFDDGPSHITPEVLDILDEYNARATFFVIGQQAEAMPHIIRRIHNEGHLIANHS
YTHDYDKVYDSPESFEEELLKTEEVIKDITGKRTTIFRPPGGEHPNMTDEKREILQEHGYTLYNWSVSAGDTATPTPSSE
VIKNNVLGGVRGSNGAVVLMHDSASRENTKKALSEILRELSFEGYSFPTLPQ
>Mature_372_residues
MKLPKFTLLIITMLALLTVSANLVDPPITEAATKQSTQNQGGVVEQIHIVVDDTALETPGRLQNGRTMVPLRGVFEQVGA
SVNWDSEEEIITIIKDWDRLELSPGTKKAEKNYDEIIKLEEAPFTSRGTTWLPLRAIGELFDLDVDWVSEHDLVRISTGE
QEKDIGKIAEDLKPIETDQSGKVVYLTFDDGPSHITPEVLDILDEYNARATFFVIGQQAEAMPHIIRRIHNEGHLIANHS
YTHDYDKVYDSPESFEEELLKTEEVIKDITGKRTTIFRPPGGEHPNMTDEKREILQEHGYTLYNWSVSAGDTATPTPSSE
VIKNNVLGGVRGSNGAVVLMHDSASRENTKKALSEILRELSFEGYSFPTLPQ

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=167, Percent_Identity=29.940119760479, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 41606; Mature: 41606

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPKFTLLIITMLALLTVSANLVDPPITEAATKQSTQNQGGVVEQIHIVVDDTALETPG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCC
RLQNGRTMVPLRGVFEQVGASVNWDSEEEIITIIKDWDRLELSPGTKKAEKNYDEIIKLE
CCCCCCEECHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHCCHHHHEEEC
EAPFTSRGTTWLPLRAIGELFDLDVDWVSEHDLVRISTGEQEKDIGKIAEDLKPIETDQS
CCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC
GKVVYLTFDDGPSHITPEVLDILDEYNARATFFVIGQQAEAMPHIIRRIHNEGHLIANHS
CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCC
YTHDYDKVYDSPESFEEELLKTEEVIKDITGKRTTIFRPPGGEHPNMTDEKREILQEHGY
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCC
TLYNWSVSAGDTATPTPSSEVIKNNVLGGVRGSNGAVVLMHDSASRENTKKALSEILREL
EEEEEEECCCCCCCCCCCHHHHHHHCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHH
SFEGYSFPTLPQ
CCCCCCCCCCCC
>Mature Secondary Structure
MKLPKFTLLIITMLALLTVSANLVDPPITEAATKQSTQNQGGVVEQIHIVVDDTALETPG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCC
RLQNGRTMVPLRGVFEQVGASVNWDSEEEIITIIKDWDRLELSPGTKKAEKNYDEIIKLE
CCCCCCEECHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHCCHHHHEEEC
EAPFTSRGTTWLPLRAIGELFDLDVDWVSEHDLVRISTGEQEKDIGKIAEDLKPIETDQS
CCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC
GKVVYLTFDDGPSHITPEVLDILDEYNARATFFVIGQQAEAMPHIIRRIHNEGHLIANHS
CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCC
YTHDYDKVYDSPESFEEELLKTEEVIKDITGKRTTIFRPPGGEHPNMTDEKREILQEHGY
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCC
TLYNWSVSAGDTATPTPSSEVIKNNVLGGVRGSNGAVVLMHDSASRENTKKALSEILREL
EEEEEEECCCCCCCCCCCHHHHHHHCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHH
SFEGYSFPTLPQ
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]