Click here to switch to the map view.

The map label for this gene is 188586893

Identifier: 188586893

GI number: 188586893

Start: 2428292

End: 2428816

Strand: Reverse

Name: 188586893

Synonym: Nther_2284

Alternate gene names: NA

Gene position: 2428816-2428292 (Counterclockwise)

Preceding gene: 188586900

Following gene: 188586892

Centisome position: 76.73

GC content: 39.43

Gene sequence:

>525_bases
ATGAAGTTATGGAAGTTATTGCTGTCATTAGTTATAATGGGTACCCTGCTACTGGCAGCAGGATGTGGAAATGGTGAGGA
AGCAAAAGAAAAATTGGAAGACAAAGAGAAGGAGAATGGTGAAGAAACAGCTATTATTACTTTATTCTTCCTAGAGCAGA
AAGAAAAGGCTTTTCATCTGGCTGAGGAGGAAAGGGAAGTCCAAGAATCAGAAGCCACTCCCCAAACGGCGTTAGAGTTA
CTCCTTGAAGGACCCGAGTCTGAAGAAGTTGAAACTATTATTCATGAAGAGACCGAGTTAATAGATATAAATGTAGAAGA
TGGTATTTGTTATGCCAATTTCACAGAAGAATTAACCCAGGGAGCATACGGTTCGGAAATTGAGCTCAATCTGGTCAAAT
CCATAGTTCATACATTGGTACAGTTTGATGAAATTGATAAAGTCCAGTTTAAAATCGAAGGTGAAATTCCAGAAAGCATA
GCTGGCCATATTTATACCGGTGAACCCCTGGATGAAGAACTGTAA

Upstream 100 bases:

>100_bases
TAAAATCAATCTCTTCATAAGTATAAGTTAATATAAATACATTTGCAATTAGGGGAGAAGAGTGATCACTAAAATCTATT
ATATTTAGGGGGTTATGAAC

Downstream 100 bases:

>100_bases
AAGTTAATATTCAAGATTTAAAACACAGGGTTAAAAAGCTTTAAACTTTAAGAAAAGACATGATAGACTTAGTATAGACA
ATCATTTTCCTGGAGGGATT

Product: spore germination protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKLWKLLLSLVIMGTLLLAAGCGNGEEAKEKLEDKEKENGEETAIITLFFLEQKEKAFHLAEEEREVQESEATPQTALEL
LLEGPESEEVETIIHEETELIDINVEDGICYANFTEELTQGAYGSEIELNLVKSIVHTLVQFDEIDKVQFKIEGEIPESI
AGHIYTGEPLDEEL

Sequences:

>Translated_174_residues
MKLWKLLLSLVIMGTLLLAAGCGNGEEAKEKLEDKEKENGEETAIITLFFLEQKEKAFHLAEEEREVQESEATPQTALEL
LLEGPESEEVETIIHEETELIDINVEDGICYANFTEELTQGAYGSEIELNLVKSIVHTLVQFDEIDKVQFKIEGEIPESI
AGHIYTGEPLDEEL
>Mature_174_residues
MKLWKLLLSLVIMGTLLLAAGCGNGEEAKEKLEDKEKENGEETAIITLFFLEQKEKAFHLAEEEREVQESEATPQTALEL
LLEGPESEEVETIIHEETELIDINVEDGICYANFTEELTQGAYGSEIELNLVKSIVHTLVQFDEIDKVQFKIEGEIPESI
AGHIYTGEPLDEEL

Specific function: Unknown

COG id: COG5401

COG function: function code R; Spore germination protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19550; Mature: 19550

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLWKLLLSLVIMGTLLLAAGCGNGEEAKEKLEDKEKENGEETAIITLFFLEQKEKAFHL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHH
AEEEREVQESEATPQTALELLLEGPESEEVETIIHEETELIDINVEDGICYANFTEELTQ
HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHC
GAYGSEIELNLVKSIVHTLVQFDEIDKVQFKIEGEIPESIAGHIYTGEPLDEEL
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLWKLLLSLVIMGTLLLAAGCGNGEEAKEKLEDKEKENGEETAIITLFFLEQKEKAFHL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHH
AEEEREVQESEATPQTALELLLEGPESEEVETIIHEETELIDINVEDGICYANFTEELTQ
HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHC
GAYGSEIELNLVKSIVHTLVQFDEIDKVQFKIEGEIPESIAGHIYTGEPLDEEL
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA