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The map label for this gene is 188586860

Identifier: 188586860

GI number: 188586860

Start: 2389543

End: 2391228

Strand: Reverse

Name: 188586860

Synonym: Nther_2251

Alternate gene names: NA

Gene position: 2391228-2389543 (Counterclockwise)

Preceding gene: 188586861

Following gene: 188586859

Centisome position: 75.54

GC content: 42.82

Gene sequence:

>1686_bases
GTGTATGCTGCTATCCCTGCAGGGATAGTTTTAGTATCTGCTTTACCTGTTTGGGAAGCTATTGAAGAAAATTCAGCAGC
CGGTTGGCATTATATTGGCTACGGTGTTATGGCCTCTTTTATCCTGACCTTTGCATTTTCCTACTTTTTTAAGGGTGTGG
AGAAGATTGAAAAGAAGGCAGTTAAGTACAGTATGATTACCTTGTTAGCAGTGATTATCCTGGTCGGTTCAATGTATGGA
GCAACTAATTATGAAAAGGCCCTGGGATACATGCCCGAAACGGTACAGGACAGAATTGATAGGGTGGATTTTGATGAAAC
TGGATTTACCACAAGAGTAGAGCTCATGGAAACTGCCTGGGATATTATAGAAGACCATCCCTTTGGTGTAGGAGGTGGAG
GCTGGGATCCTTTATATCCCCAGTATATGGAGAGGGATTACACCTCTTCCAAAGTCCATTCCCATATATTTCAGATAGGA
GTCGAGACAGGCATCCCCGGGATGATTATCTTCGGGGGGATTTGGGCTGGACTGATATATCAGTTGCTTGTTATCCGGCG
AAGGGGAACTGCTCGCGAGTTGTATCCCGCTGCCGGTGTCTTTGTAGCGGCACTGGCCCTTGGAGGTCACAGTTTGATTG
ATTTCAACTTGTCCCTGGGAGCTGTTTCAGTATATCTCTGGGCCCTCTTTGGACTGGTAACTTTTTATTACCGAGAGGTT
ATTGATTCGAACCGGTCGGATAGGTCAGCACAATCGGATCAAATGTCGGATCAAATGAAACTGGAGGAGTCAAGTGAATT
GGGCCAGTCCGAGGAAGAGAAAGGACAGGATCAGGAAAAAGGGGATAAAAGATTTTATAAATGGCATCAAGGTGTGAGAT
ATGCTGTTTTTGTGGTTTGTATTGGATTGTTAGTTTATTCTAGTACCATGTTTTACGGTTACAGACAAGGGGAAGAGGCC
CTTTCTGCCATGGAACTTGAATTTTGGGGTACGGCTATCCCCACCTATGAAAAGGCAGTGAAATACGATTCCCTTAACTA
TGACTATCACTTTAGTTTGGTCCAGGCTTATGAAGGGCTATACCAGGAAACCTCCAATGAAGACAATATTAGAAAAGCAG
TCCAACATGCAGACCGGGCCATCGAGCTAAACCCTGAAGATGCTGTTTTAAACAGAAATTACGGTCAGTTTATGCTTCGG
ATAGGTGATATAGAAGGTGGACTTGAGCATCTAAAAAGGGCTTATCAGAACCAACCTTATAATGAGGACAAGTATCTAGT
GTATACCGAAGCTTTGATATCTGTAAGCGAAACCTATCTGTTCCAGGAAAAATACCGAGAGGGTCAGGAAAGGTTGCAGG
AATTGATTGAGTTCCGGGAGGAGTTTTTAGAGTACAATTCCCAGTCTCGGGATTTTGATCAGGAGGTTTTCAAAGCGTAT
GTTCTTTTAGGACATCTTGAAAGTGATGACCTTGAAGGTGATGAGCAAGGAAAATATGAAAAAGCCAAAGAGCTTGCAGA
AGAAGCGGACCTCTCCTGGGAAGGTGAGTTACTTCCTTATCTTGCCTTGATGTATCATGATTTGGACGAAAAAGAAGAAG
AGTATCAGGAAATAAAGGAAAAAATGGAAGATGAAGCGAAGGAAATATATGGATGGTTAAAAGAAACGCTTTATAAACTT
TATTAA

Upstream 100 bases:

>100_bases
GGACAATTATAGTTATTCTAAAAAGTGGGCGTGGTTGTACTTTCCTGTGATTTTACTAATATACTGGTTCCTTAACTTGA
AAAGGTTTTTGAATTCCTTT

Downstream 100 bases:

>100_bases
AATACAGATTAAGGACAATTTTATGGTCTTTCAAATTGTTAATAGTCTTTATTAACAGGAGGGGGGGCTGGTTATTGATG
AGTCAGAATTTTGATATAGA

Product: O-antigen polymerase

Products: NA

Alternate protein names: TPR Repeat-Containing Protein

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MYAAIPAGIVLVSALPVWEAIEENSAAGWHYIGYGVMASFILTFAFSYFFKGVEKIEKKAVKYSMITLLAVIILVGSMYG
ATNYEKALGYMPETVQDRIDRVDFDETGFTTRVELMETAWDIIEDHPFGVGGGGWDPLYPQYMERDYTSSKVHSHIFQIG
VETGIPGMIIFGGIWAGLIYQLLVIRRRGTARELYPAAGVFVAALALGGHSLIDFNLSLGAVSVYLWALFGLVTFYYREV
IDSNRSDRSAQSDQMSDQMKLEESSELGQSEEEKGQDQEKGDKRFYKWHQGVRYAVFVVCIGLLVYSSTMFYGYRQGEEA
LSAMELEFWGTAIPTYEKAVKYDSLNYDYHFSLVQAYEGLYQETSNEDNIRKAVQHADRAIELNPEDAVLNRNYGQFMLR
IGDIEGGLEHLKRAYQNQPYNEDKYLVYTEALISVSETYLFQEKYREGQERLQELIEFREEFLEYNSQSRDFDQEVFKAY
VLLGHLESDDLEGDEQGKYEKAKELAEEADLSWEGELLPYLALMYHDLDEKEEEYQEIKEKMEDEAKEIYGWLKETLYKL
Y

Sequences:

>Translated_561_residues
MYAAIPAGIVLVSALPVWEAIEENSAAGWHYIGYGVMASFILTFAFSYFFKGVEKIEKKAVKYSMITLLAVIILVGSMYG
ATNYEKALGYMPETVQDRIDRVDFDETGFTTRVELMETAWDIIEDHPFGVGGGGWDPLYPQYMERDYTSSKVHSHIFQIG
VETGIPGMIIFGGIWAGLIYQLLVIRRRGTARELYPAAGVFVAALALGGHSLIDFNLSLGAVSVYLWALFGLVTFYYREV
IDSNRSDRSAQSDQMSDQMKLEESSELGQSEEEKGQDQEKGDKRFYKWHQGVRYAVFVVCIGLLVYSSTMFYGYRQGEEA
LSAMELEFWGTAIPTYEKAVKYDSLNYDYHFSLVQAYEGLYQETSNEDNIRKAVQHADRAIELNPEDAVLNRNYGQFMLR
IGDIEGGLEHLKRAYQNQPYNEDKYLVYTEALISVSETYLFQEKYREGQERLQELIEFREEFLEYNSQSRDFDQEVFKAY
VLLGHLESDDLEGDEQGKYEKAKELAEEADLSWEGELLPYLALMYHDLDEKEEEYQEIKEKMEDEAKEIYGWLKETLYKL
Y
>Mature_561_residues
MYAAIPAGIVLVSALPVWEAIEENSAAGWHYIGYGVMASFILTFAFSYFFKGVEKIEKKAVKYSMITLLAVIILVGSMYG
ATNYEKALGYMPETVQDRIDRVDFDETGFTTRVELMETAWDIIEDHPFGVGGGGWDPLYPQYMERDYTSSKVHSHIFQIG
VETGIPGMIIFGGIWAGLIYQLLVIRRRGTARELYPAAGVFVAALALGGHSLIDFNLSLGAVSVYLWALFGLVTFYYREV
IDSNRSDRSAQSDQMSDQMKLEESSELGQSEEEKGQDQEKGDKRFYKWHQGVRYAVFVVCIGLLVYSSTMFYGYRQGEEA
LSAMELEFWGTAIPTYEKAVKYDSLNYDYHFSLVQAYEGLYQETSNEDNIRKAVQHADRAIELNPEDAVLNRNYGQFMLR
IGDIEGGLEHLKRAYQNQPYNEDKYLVYTEALISVSETYLFQEKYREGQERLQELIEFREEFLEYNSQSRDFDQEVFKAY
VLLGHLESDDLEGDEQGKYEKAKELAEEADLSWEGELLPYLALMYHDLDEKEEEYQEIKEKMEDEAKEIYGWLKETLYKL
Y

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64625; Mature: 64625

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAAIPAGIVLVSALPVWEAIEENSAAGWHYIGYGVMASFILTFAFSYFFKGVEKIEKKA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKYSMITLLAVIILVGSMYGATNYEKALGYMPETVQDRIDRVDFDETGFTTRVELMETAW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DIIEDHPFGVGGGGWDPLYPQYMERDYTSSKVHSHIFQIGVETGIPGMIIFGGIWAGLIY
HHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QLLVIRRRGTARELYPAAGVFVAALALGGHSLIDFNLSLGAVSVYLWALFGLVTFYYREV
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
IDSNRSDRSAQSDQMSDQMKLEESSELGQSEEEKGQDQEKGDKRFYKWHQGVRYAVFVVC
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHHH
IGLLVYSSTMFYGYRQGEEALSAMELEFWGTAIPTYEKAVKYDSLNYDYHFSLVQAYEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
YQETSNEDNIRKAVQHADRAIELNPEDAVLNRNYGQFMLRIGDIEGGLEHLKRAYQNQPY
HHHCCCHHHHHHHHHHHCCEEECCCCHHHHCCCCHHEEEEECCCHHHHHHHHHHHCCCCC
NEDKYLVYTEALISVSETYLFQEKYREGQERLQELIEFREEFLEYNSQSRDFDQEVFKAY
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VLLGHLESDDLEGDEQGKYEKAKELAEEADLSWEGELLPYLALMYHDLDEKEEEYQEIKE
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
KMEDEAKEIYGWLKETLYKLY
HHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYAAIPAGIVLVSALPVWEAIEENSAAGWHYIGYGVMASFILTFAFSYFFKGVEKIEKKA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKYSMITLLAVIILVGSMYGATNYEKALGYMPETVQDRIDRVDFDETGFTTRVELMETAW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DIIEDHPFGVGGGGWDPLYPQYMERDYTSSKVHSHIFQIGVETGIPGMIIFGGIWAGLIY
HHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QLLVIRRRGTARELYPAAGVFVAALALGGHSLIDFNLSLGAVSVYLWALFGLVTFYYREV
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
IDSNRSDRSAQSDQMSDQMKLEESSELGQSEEEKGQDQEKGDKRFYKWHQGVRYAVFVVC
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHHH
IGLLVYSSTMFYGYRQGEEALSAMELEFWGTAIPTYEKAVKYDSLNYDYHFSLVQAYEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
YQETSNEDNIRKAVQHADRAIELNPEDAVLNRNYGQFMLRIGDIEGGLEHLKRAYQNQPY
HHHCCCHHHHHHHHHHHCCEEECCCCHHHHCCCCHHEEEEECCCHHHHHHHHHHHCCCCC
NEDKYLVYTEALISVSETYLFQEKYREGQERLQELIEFREEFLEYNSQSRDFDQEVFKAY
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VLLGHLESDDLEGDEQGKYEKAKELAEEADLSWEGELLPYLALMYHDLDEKEEEYQEIKE
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
KMEDEAKEIYGWLKETLYKLY
HHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA