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The map label for this gene is atoE [H]

Identifier: 188586858

GI number: 188586858

Start: 2386086

End: 2387408

Strand: Reverse

Name: atoE [H]

Synonym: Nther_2249

Alternate gene names: 188586858

Gene position: 2387408-2386086 (Counterclockwise)

Preceding gene: 188586859

Following gene: 188586857

Centisome position: 75.42

GC content: 38.7

Gene sequence:

>1323_bases
TTGCTTAATCGTTTAGCTCGCTTTTTTGTTCATCTAATGCAAAAGTACTTACCTGCACCGTTCTTATTTGCTATTATTTT
GACCTTGATTGTTTTTGTTTTAGGTATTGTAGCTACTGATTCTGGTCCCGGAGATATGGTGATTTATTGGGGCGATGGTT
TTTGGAACTTACTGGAGTTTGCCATGCAGATGGCTTTGGTCCTTGTAACTGGACATGTTATGGCTAATAGTAGGCCTATT
AAGAGAATCTTGAATTATGGGGCTTCTATACCTAACAATCCAACTCAGGCTATAGTAATGGTGTCTTTTATATCTGCTGT
TGCTTGTTGGATTAACTGGGGATTTGGTTTGGTTGTTGGAGCATTGTTTGCAAAAGAAATGGCTAAAGTTGTTCGAGGCT
TAGACTATCGGCTTGTAATAGCTAGTGCTTATTCTGGCTTTTTGGTTTGGCACGCTGGATTTTCCGCTTCTGTACCCTTA
GCTGTTGCAACTGAAGGCCATGATTTTGAAGAACTGGTAGGTGTTATTAGTACAAGTGAAACAATTTTTTCTATTGAAAA
CCTGATTATATCTGCGGCAGTTATAGTGATGCTTCCTTTATTAAATAAGGCAATGATGCCTAAAAAGGAAGAAGTAGTAG
AAATCGATGCATCTTTATTAGAAGATGAAGTCAGCGCTACTGATGAAGAAAATGAATTGGAAACAGTGGCTGACCGCATA
GAAAATAGCAAAGCCATCTCTTTAATCATTGGTATAATGGGACTTGCTTATATCGGATATTATTTTTTGATAGAAGAAGG
GACCCTTGGATTGAACATTGTTAACTTTATATTCTTATTTGTTGGGATCTTACTTCATGGGACACCTAAACAGTATCTTA
AGGCACTACCTGAAGCTGCAAAAGCAGCTAGTGGGATCATTATTCAATTTCCGTTTTATGCTGGTATCATGGGTATGATG
ACTGCTTCTGGCCTAGCAGCTGTGATTTCACAAGGACTTGTAAATATGTCTACTGAAACCACTTTCCCTATATTTTCATT
CTTAAGTGCTGGTATTGTAAACTTCTTTGTTCCTTCTGGAGGTGGTCAATGGGCAGTTCAAGCACCAATAATGCTACCTG
CTTCACTTGAAATGGGAGTAGATGTTGCAAAAACATGTATGGCAGTAGCTTGGGGTGACGCTTGGACTAATATGATACAA
CCTTTCTGGGCACTTCCCGCCCTTGGAATTGCAGGATTGGGTGCAAGAGACATAATGGGTTATTGTCTAATGGCCCTCTT
ATTTTCAGGCGTAATTATAATCTTTGGATTACTCATATTTTAA

Upstream 100 bases:

>100_bases
TGTGAATTAACAGACAAATAAGACGCTTTTTAAAAAATTGGCATATAAATTGCAATATACTAATTATAAATTCAAAAAAT
ATGACAAAGGAGGTTTTATT

Downstream 100 bases:

>100_bases
GCAAAATCTAATTAGGTGGTGAAGCTATTATGAAACAAATTTTAAGTGCTAAAGAGAGTGTTGAAAAGATATTTGATGGT
ATGACAGTTATGATAGGAGG

Product: short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MLNRLARFFVHLMQKYLPAPFLFAIILTLIVFVLGIVATDSGPGDMVIYWGDGFWNLLEFAMQMALVLVTGHVMANSRPI
KRILNYGASIPNNPTQAIVMVSFISAVACWINWGFGLVVGALFAKEMAKVVRGLDYRLVIASAYSGFLVWHAGFSASVPL
AVATEGHDFEELVGVISTSETIFSIENLIISAAVIVMLPLLNKAMMPKKEEVVEIDASLLEDEVSATDEENELETVADRI
ENSKAISLIIGIMGLAYIGYYFLIEEGTLGLNIVNFIFLFVGILLHGTPKQYLKALPEAAKAASGIIIQFPFYAGIMGMM
TASGLAAVISQGLVNMSTETTFPIFSFLSAGIVNFFVPSGGGQWAVQAPIMLPASLEMGVDVAKTCMAVAWGDAWTNMIQ
PFWALPALGIAGLGARDIMGYCLMALLFSGVIIIFGLLIF

Sequences:

>Translated_440_residues
MLNRLARFFVHLMQKYLPAPFLFAIILTLIVFVLGIVATDSGPGDMVIYWGDGFWNLLEFAMQMALVLVTGHVMANSRPI
KRILNYGASIPNNPTQAIVMVSFISAVACWINWGFGLVVGALFAKEMAKVVRGLDYRLVIASAYSGFLVWHAGFSASVPL
AVATEGHDFEELVGVISTSETIFSIENLIISAAVIVMLPLLNKAMMPKKEEVVEIDASLLEDEVSATDEENELETVADRI
ENSKAISLIIGIMGLAYIGYYFLIEEGTLGLNIVNFIFLFVGILLHGTPKQYLKALPEAAKAASGIIIQFPFYAGIMGMM
TASGLAAVISQGLVNMSTETTFPIFSFLSAGIVNFFVPSGGGQWAVQAPIMLPASLEMGVDVAKTCMAVAWGDAWTNMIQ
PFWALPALGIAGLGARDIMGYCLMALLFSGVIIIFGLLIF
>Mature_440_residues
MLNRLARFFVHLMQKYLPAPFLFAIILTLIVFVLGIVATDSGPGDMVIYWGDGFWNLLEFAMQMALVLVTGHVMANSRPI
KRILNYGASIPNNPTQAIVMVSFISAVACWINWGFGLVVGALFAKEMAKVVRGLDYRLVIASAYSGFLVWHAGFSASVPL
AVATEGHDFEELVGVISTSETIFSIENLIISAAVIVMLPLLNKAMMPKKEEVVEIDASLLEDEVSATDEENELETVADRI
ENSKAISLIIGIMGLAYIGYYFLIEEGTLGLNIVNFIFLFVGILLHGTPKQYLKALPEAAKAASGIIIQFPFYAGIMGMM
TASGLAAVISQGLVNMSTETTFPIFSFLSAGIVNFFVPSGGGQWAVQAPIMLPASLEMGVDVAKTCMAVAWGDAWTNMIQ
PFWALPALGIAGLGARDIMGYCLMALLFSGVIIIFGLLIF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=440, Percent_Identity=48.6363636363636, Blast_Score=459, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47541; Mature: 47541

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRLARFFVHLMQKYLPAPFLFAIILTLIVFVLGIVATDSGPGDMVIYWGDGFWNLLEF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH
AMQMALVLVTGHVMANSRPIKRILNYGASIPNNPTQAIVMVSFISAVACWINWGFGLVVG
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
ALFAKEMAKVVRGLDYRLVIASAYSGFLVWHAGFSASVPLAVATEGHDFEELVGVISTSE
HHHHHHHHHHHHCCCCEEEEEHHHCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCH
TIFSIENLIISAAVIVMLPLLNKAMMPKKEEVVEIDASLLEDEVSATDEENELETVADRI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ENSKAISLIIGIMGLAYIGYYFLIEEGTLGLNIVNFIFLFVGILLHGTPKQYLKALPEAA
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KAASGIIIQFPFYAGIMGMMTASGLAAVISQGLVNMSTETTFPIFSFLSAGIVNFFVPSG
HHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCC
GGQWAVQAPIMLPASLEMGVDVAKTCMAVAWGDAWTNMIQPFWALPALGIAGLGARDIMG
CCCEEEECCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YCLMALLFSGVIIIFGLLIF
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLNRLARFFVHLMQKYLPAPFLFAIILTLIVFVLGIVATDSGPGDMVIYWGDGFWNLLEF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH
AMQMALVLVTGHVMANSRPIKRILNYGASIPNNPTQAIVMVSFISAVACWINWGFGLVVG
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
ALFAKEMAKVVRGLDYRLVIASAYSGFLVWHAGFSASVPLAVATEGHDFEELVGVISTSE
HHHHHHHHHHHHCCCCEEEEEHHHCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCH
TIFSIENLIISAAVIVMLPLLNKAMMPKKEEVVEIDASLLEDEVSATDEENELETVADRI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ENSKAISLIIGIMGLAYIGYYFLIEEGTLGLNIVNFIFLFVGILLHGTPKQYLKALPEAA
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KAASGIIIQFPFYAGIMGMMTASGLAAVISQGLVNMSTETTFPIFSFLSAGIVNFFVPSG
HHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCC
GGQWAVQAPIMLPASLEMGVDVAKTCMAVAWGDAWTNMIQPFWALPALGIAGLGARDIMG
CCCEEEECCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YCLMALLFSGVIIIFGLLIF
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]