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The map label for this gene is tsr [C]

Identifier: 188586791

GI number: 188586791

Start: 2309516

End: 2311564

Strand: Reverse

Name: tsr [C]

Synonym: Nther_2182

Alternate gene names: 188586791

Gene position: 2311564-2309516 (Counterclockwise)

Preceding gene: 188586793

Following gene: 188586788

Centisome position: 73.02

GC content: 36.8

Gene sequence:

>2049_bases
ATGAGAAACTTATTCAGTGGTCTTAGTTTGCAGTGGAGGATGTTAATACCCTTAATTATTATCACAGTCTTAGCAGTTGT
GGTAATGGGGTATACATTATCCAATAATGTTGAAGATCTTGTAATTGATTTGATGACTAACAATGCAGAGAGTGAGATGG
AATCAGTGGTTGATGGTTTAACATCTGCCAGTCAAAACAATGTAATGTTAATGGATATTATGGAAGATCAGTTTTTGGAT
GACACCTGGGCTGCAGCAACATTAATTGAAGAACATCCAGATTATTTATCCCAGGATGGGATGGAGGAGTTAAGGGCAAC
GCTAGGAGTTGATGAAGTTCATGTAACAGATTCAGAAGGCATAATCCAATATAGTAGTTTTGAAGATGCCATAGGACTAG
ATTTTAGTGAAAGTGAACAAACGCAACCCTTTCTTGATTTAATTGACCAAGAAGATGCGGTCCTTGTCCAGGAGGCGGAA
GAAAGGGCTCAAGACGATACTATGTTTCAATACATAGGAGTATCCAGACAGGATCAAGATGGTATCGTTCAAATCGGTAT
TGAAGTGGATGAACTGCAAGAGCTTTACGAATTCGTTGATCAAGAGGCGCAATCGATTGCTGAAAATGCAGAGTTAGGTG
AAGAAGGGCTTGTCTTTGCAATTAACGATCAAGGTACTTATAGCCTACATTCTAATGAAGATATGATTAATCAACCCATG
CCATATCAAGAATTGCAGGATTATATTTTTGAACATCAAAGTGGAGAAACCAGCATGGATATAGAGGGCGAAGAATATTA
TATAACATTTGAAAAGTGGGAAGATCTTTATGTCGGTGGCATGATCAGTATGGATGAAATCAGGGAACCGATTAATACTT
TTAATCAAATAGTAGTTGCAGCTATAGCAATTATAATTTTATTGTTAATCGGGACAAATATGGTTATTTTTAAACAATTA
CTAACGAAGCCAATTTCAAATTTAACACATATAATCAATAAATTAGCCGATTATGATTTTAGCTTTGATGAAGGGCATGA
AGCAGTCAAATACATGAATAGATCCGATGAGATTGGGACAATCACTAATTCCCTTGCTACTATGCAAAACAATGTGGTCT
CTCTAATTAAAAAATTACAAGAAAAATCCAATGAGGTAGCCTCCTCTTCCGAAAATTTAAGTGCTAATACAGAGGAAAAT
ACTAGTGCAGCTAATGAAGTATCAAAAGCTGTTGAAGATATTGCCAGTGGTGCAGCTAATCAGGCGGAAAAAACAGAACA
AACCTCAAATAACTCGGAACGACTAGGAGAAATAATTGATGAAGACCAGAAAAGTGTCCAAGAATTAATTGATATAACAA
AAGATGTGACAAATCATAAAGAAAAAGGCTTTGAAATCGTAGAAAATTTGACTGAAGATACTCAAAAAGTAAATGAAGCA
ACGGATAAAATGATGGAAGTAGTTAATAAAACAAAAGAAAGTGCAGATACCATCCAGTCAGTAAGTGGTACTATCCAGGA
TATTGCTGAACAAACAAATCTGTTGGCTTTAAATGCCAGTATAGAGGCGGCGAGAGCCGGAGAAGATGGAAAAGGTTTCG
CAGTAGTTGCAGACGAAATCAGAAAGTTGGCTGAACGCAGCAACGAACACTCCGAAGAAATATTATCCTCAGTCAAGGGG
CTGAAAGATAACGCAGAAGGTGCAGTTAACAATATGGAAGAGACCAAAGAAACGGTTAATAATCAGCGGGAAAATGTAAG
TAAAACCAAAGAACAGTTTGAGGAAATTGCCGAAAGAATAAATAAGATAAAAGAAAAAACCGAAGAATTTCAAGATACCG
GTGGTGACATGCAAACCCAGAAAAATGAGATTATCGAAGCTTTACAAGACTTATCAGCTATTGCAGAAGAAAATTCATCT
TCTTCCGAAGAGATATCATCATCAGTTGAAGAGCAAACGGCTTCAATGGATGAAATAGCAAAAGCCAGTGAGCAACTTGC
CAAATTGGCCGAGGACATGCAGGAAGAAGCATCTAAGTTTAAGTATTAA

Upstream 100 bases:

>100_bases
GCCAAGGAAAGGGGTTTGTGCTGCTCTTCTTTGGAGCAGCTTTTATTTTATTGGAATACTTAATCAGCAAAAATTTAAAC
ACAAATGGGGGGGAGTAATT

Downstream 100 bases:

>100_bases
TCCTACCACTACCAATGTTTAAAGGAGCCTTATTGTAAGGCTCCTTTTTGCAGTTATTTATGTTTATGGCGTTGTTATAC
TGCGTAGTGCTATTAATGTA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MRNLFSGLSLQWRMLIPLIIITVLAVVVMGYTLSNNVEDLVIDLMTNNAESEMESVVDGLTSASQNNVMLMDIMEDQFLD
DTWAAATLIEEHPDYLSQDGMEELRATLGVDEVHVTDSEGIIQYSSFEDAIGLDFSESEQTQPFLDLIDQEDAVLVQEAE
ERAQDDTMFQYIGVSRQDQDGIVQIGIEVDELQELYEFVDQEAQSIAENAELGEEGLVFAINDQGTYSLHSNEDMINQPM
PYQELQDYIFEHQSGETSMDIEGEEYYITFEKWEDLYVGGMISMDEIREPINTFNQIVVAAIAIIILLLIGTNMVIFKQL
LTKPISNLTHIINKLADYDFSFDEGHEAVKYMNRSDEIGTITNSLATMQNNVVSLIKKLQEKSNEVASSSENLSANTEEN
TSAANEVSKAVEDIASGAANQAEKTEQTSNNSERLGEIIDEDQKSVQELIDITKDVTNHKEKGFEIVENLTEDTQKVNEA
TDKMMEVVNKTKESADTIQSVSGTIQDIAEQTNLLALNASIEAARAGEDGKGFAVVADEIRKLAERSNEHSEEILSSVKG
LKDNAEGAVNNMEETKETVNNQRENVSKTKEQFEEIAERINKIKEKTEEFQDTGGDMQTQKNEIIEALQDLSAIAEENSS
SSEEISSSVEEQTASMDEIAKASEQLAKLAEDMQEEASKFKY

Sequences:

>Translated_682_residues
MRNLFSGLSLQWRMLIPLIIITVLAVVVMGYTLSNNVEDLVIDLMTNNAESEMESVVDGLTSASQNNVMLMDIMEDQFLD
DTWAAATLIEEHPDYLSQDGMEELRATLGVDEVHVTDSEGIIQYSSFEDAIGLDFSESEQTQPFLDLIDQEDAVLVQEAE
ERAQDDTMFQYIGVSRQDQDGIVQIGIEVDELQELYEFVDQEAQSIAENAELGEEGLVFAINDQGTYSLHSNEDMINQPM
PYQELQDYIFEHQSGETSMDIEGEEYYITFEKWEDLYVGGMISMDEIREPINTFNQIVVAAIAIIILLLIGTNMVIFKQL
LTKPISNLTHIINKLADYDFSFDEGHEAVKYMNRSDEIGTITNSLATMQNNVVSLIKKLQEKSNEVASSSENLSANTEEN
TSAANEVSKAVEDIASGAANQAEKTEQTSNNSERLGEIIDEDQKSVQELIDITKDVTNHKEKGFEIVENLTEDTQKVNEA
TDKMMEVVNKTKESADTIQSVSGTIQDIAEQTNLLALNASIEAARAGEDGKGFAVVADEIRKLAERSNEHSEEILSSVKG
LKDNAEGAVNNMEETKETVNNQRENVSKTKEQFEEIAERINKIKEKTEEFQDTGGDMQTQKNEIIEALQDLSAIAEENSS
SSEEISSSVEEQTASMDEIAKASEQLAKLAEDMQEEASKFKY
>Mature_682_residues
MRNLFSGLSLQWRMLIPLIIITVLAVVVMGYTLSNNVEDLVIDLMTNNAESEMESVVDGLTSASQNNVMLMDIMEDQFLD
DTWAAATLIEEHPDYLSQDGMEELRATLGVDEVHVTDSEGIIQYSSFEDAIGLDFSESEQTQPFLDLIDQEDAVLVQEAE
ERAQDDTMFQYIGVSRQDQDGIVQIGIEVDELQELYEFVDQEAQSIAENAELGEEGLVFAINDQGTYSLHSNEDMINQPM
PYQELQDYIFEHQSGETSMDIEGEEYYITFEKWEDLYVGGMISMDEIREPINTFNQIVVAAIAIIILLLIGTNMVIFKQL
LTKPISNLTHIINKLADYDFSFDEGHEAVKYMNRSDEIGTITNSLATMQNNVVSLIKKLQEKSNEVASSSENLSANTEEN
TSAANEVSKAVEDIASGAANQAEKTEQTSNNSERLGEIIDEDQKSVQELIDITKDVTNHKEKGFEIVENLTEDTQKVNEA
TDKMMEVVNKTKESADTIQSVSGTIQDIAEQTNLLALNASIEAARAGEDGKGFAVVADEIRKLAERSNEHSEEILSSVKG
LKDNAEGAVNNMEETKETVNNQRENVSKTKEQFEEIAERINKIKEKTEEFQDTGGDMQTQKNEIIEALQDLSAIAEENSS
SSEEISSSVEEQTASMDEIAKASEQLAKLAEDMQEEASKFKY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=261, Percent_Identity=27.5862068965517, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787690, Length=362, Percent_Identity=22.9281767955801, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789453, Length=355, Percent_Identity=26.4788732394366, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1788195, Length=285, Percent_Identity=27.0175438596491, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1788194, Length=416, Percent_Identity=23.0769230769231, Blast_Score=93, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 76091; Mature: 76091

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLFSGLSLQWRMLIPLIIITVLAVVVMGYTLSNNVEDLVIDLMTNNAESEMESVVDGL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
TSASQNNVMLMDIMEDQFLDDTWAAATLIEEHPDYLSQDGMEELRATLGVDEVHVTDSEG
HCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCCCEEEECCCC
IIQYSSFEDAIGLDFSESEQTQPFLDLIDQEDAVLVQEAEERAQDDTMFQYIGVSRQDQD
CEEECCCCHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GIVQIGIEVDELQELYEFVDQEAQSIAENAELGEEGLVFAINDQGTYSLHSNEDMINQPM
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHCCCCC
PYQELQDYIFEHQSGETSMDIEGEEYYITFEKWEDLYVGGMISMDEIREPINTFNQIVVA
CHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHH
AIAIIILLLIGTNMVIFKQLLTKPISNLTHIINKLADYDFSFDEGHEAVKYMNRSDEIGT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHH
ITNSLATMQNNVVSLIKKLQEKSNEVASSSENLSANTEENTSAANEVSKAVEDIASGAAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
QAEKTEQTSNNSERLGEIIDEDQKSVQELIDITKDVTNHKEKGFEIVENLTEDTQKVNEA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDKMMEVVNKTKESADTIQSVSGTIQDIAEQTNLLALNASIEAARAGEDGKGFAVVADEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHH
RKLAERSNEHSEEILSSVKGLKDNAEGAVNNMEETKETVNNQRENVSKTKEQFEEIAERI
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKIKEKTEEFQDTGGDMQTQKNEIIEALQDLSAIAEENSSSSEEISSSVEEQTASMDEIA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KASEQLAKLAEDMQEEASKFKY
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNLFSGLSLQWRMLIPLIIITVLAVVVMGYTLSNNVEDLVIDLMTNNAESEMESVVDGL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
TSASQNNVMLMDIMEDQFLDDTWAAATLIEEHPDYLSQDGMEELRATLGVDEVHVTDSEG
HCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCCCEEEECCCC
IIQYSSFEDAIGLDFSESEQTQPFLDLIDQEDAVLVQEAEERAQDDTMFQYIGVSRQDQD
CEEECCCCHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GIVQIGIEVDELQELYEFVDQEAQSIAENAELGEEGLVFAINDQGTYSLHSNEDMINQPM
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHCCCCC
PYQELQDYIFEHQSGETSMDIEGEEYYITFEKWEDLYVGGMISMDEIREPINTFNQIVVA
CHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHH
AIAIIILLLIGTNMVIFKQLLTKPISNLTHIINKLADYDFSFDEGHEAVKYMNRSDEIGT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHH
ITNSLATMQNNVVSLIKKLQEKSNEVASSSENLSANTEENTSAANEVSKAVEDIASGAAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
QAEKTEQTSNNSERLGEIIDEDQKSVQELIDITKDVTNHKEKGFEIVENLTEDTQKVNEA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDKMMEVVNKTKESADTIQSVSGTIQDIAEQTNLLALNASIEAARAGEDGKGFAVVADEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHH
RKLAERSNEHSEEILSSVKGLKDNAEGAVNNMEETKETVNNQRENVSKTKEQFEEIAERI
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKIKEKTEEFQDTGGDMQTQKNEIIEALQDLSAIAEENSSSSEEISSSVEEQTASMDEIA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KASEQLAKLAEDMQEEASKFKY
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA