| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586778
Identifier: 188586778
GI number: 188586778
Start: 2295443
End: 2295979
Strand: Reverse
Name: 188586778
Synonym: Nther_2169
Alternate gene names: NA
Gene position: 2295979-2295443 (Counterclockwise)
Preceding gene: 188586779
Following gene: 188586777
Centisome position: 72.53
GC content: 34.64
Gene sequence:
>537_bases ATGAATGATCAACATGTGGAAGACTTAATAAACAAATATGGGTTTCAAGATTATAAGTGGATAGACTCTAAGGAAATAGT CGTCAAGCAATGGGTTCGTTTTAAATGTTTATTTATGTGTGATACTTATGGCACAAAAGCAGTGTGTCCGCCTAATATGC CCACAGTCCAAGAATGTGAAAAGTTTTTTTCTGAATACTCCAAAGCGGTAATTTTACGTATTCAAGTCCCAGCTTATCAC GGAGATAAAGATTCTGAAGTATTCAGAGAAATTGATAAGAACTTAATAGAACTGGAAAAAGAAATATTTTATGCAGGTTA TTATAAAGTCATGGCTTTTTTAGCAACTATCTGTTATCAATGTCAAGATTGTCCCAGGGAAATGACTGATTGTGTTTATA AACAGTGGTCTCGTCCTACACCAGAGGCTTTGGGAGTAGACGTGTTTGAAACAGTTAAAAAAGTTGGCTATCCAATAGAA GTGCTGTCAAATTATCAGCAGCAAATGAATAGATACGCTATCATAATGATTGAATGA
Upstream 100 bases:
>100_bases AGTGGAATTACAAATCAGGTGAATTGATATATATATCAATTATATAGTGGCAGAAAATTAAATTTATCATTAATATTGAT TAAAAGGTGAGGTGATGACA
Downstream 100 bases:
>100_bases TGTGAGACGTTAAAATTTCGTTTAGGGGGGGTTATCCTTTGAAGCGAAAAGTAATCAACTGGAAGTGGGAGGACAGTGAA GCCCAAAAGTCGTTTATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNDQHVEDLINKYGFQDYKWIDSKEIVVKQWVRFKCLFMCDTYGTKAVCPPNMPTVQECEKFFSEYSKAVILRIQVPAYH GDKDSEVFREIDKNLIELEKEIFYAGYYKVMAFLATICYQCQDCPREMTDCVYKQWSRPTPEALGVDVFETVKKVGYPIE VLSNYQQQMNRYAIIMIE
Sequences:
>Translated_178_residues MNDQHVEDLINKYGFQDYKWIDSKEIVVKQWVRFKCLFMCDTYGTKAVCPPNMPTVQECEKFFSEYSKAVILRIQVPAYH GDKDSEVFREIDKNLIELEKEIFYAGYYKVMAFLATICYQCQDCPREMTDCVYKQWSRPTPEALGVDVFETVKKVGYPIE VLSNYQQQMNRYAIIMIE >Mature_178_residues MNDQHVEDLINKYGFQDYKWIDSKEIVVKQWVRFKCLFMCDTYGTKAVCPPNMPTVQECEKFFSEYSKAVILRIQVPAYH GDKDSEVFREIDKNLIELEKEIFYAGYYKVMAFLATICYQCQDCPREMTDCVYKQWSRPTPEALGVDVFETVKKVGYPIE VLSNYQQQMNRYAIIMIE
Specific function: Unknown
COG id: COG5423
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21078; Mature: 21078
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDQHVEDLINKYGFQDYKWIDSKEIVVKQWVRFKCLFMCDTYGTKAVCPPNMPTVQECE CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHH KFFSEYSKAVILRIQVPAYHGDKDSEVFREIDKNLIELEKEIFYAGYYKVMAFLATICYQ HHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CQDCPREMTDCVYKQWSRPTPEALGVDVFETVKKVGYPIEVLSNYQQQMNRYAIIMIE HHCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEC >Mature Secondary Structure MNDQHVEDLINKYGFQDYKWIDSKEIVVKQWVRFKCLFMCDTYGTKAVCPPNMPTVQECE CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHH KFFSEYSKAVILRIQVPAYHGDKDSEVFREIDKNLIELEKEIFYAGYYKVMAFLATICYQ HHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CQDCPREMTDCVYKQWSRPTPEALGVDVFETVKKVGYPIEVLSNYQQQMNRYAIIMIE HHCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA