| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586727
Identifier: 188586727
GI number: 188586727
Start: 2238307
End: 2238816
Strand: Reverse
Name: 188586727
Synonym: Nther_2117
Alternate gene names: NA
Gene position: 2238816-2238307 (Counterclockwise)
Preceding gene: 188586728
Following gene: 188586726
Centisome position: 70.72
GC content: 41.57
Gene sequence:
>510_bases TTGAGAAGAATTTTATTTAGTACAGGATTTGTGTTTGTTCTAAGTTTATTCATGGTGACTGGAGCTATGGCCTTTGGAGT AGACTTGGATAATGTACCAGATGGTACTTACACTGGCGCTGGTGAAGGATTTAATGAGGCTATAGAAGTTGAAGTGACTG TTGAAGGTGGAGAAGTGACTAACATTGAAGCGATTAGTCAAGAAGAAACACCTGAATACTGGGAAGATGGAAAGCAAACT ATGGATGATATTATAGAAGCACAAAGTACAGACGTAGATGTTGAAACAGGTGCAACTGCTTCTAGTGAAGGGATTGTAGA AGCAGTTAGAGATGCTCTAGCTGGGGAAGAAGTTGCAGAAGAAGCAGAAGAAGACGTAGAAGAAGATGTAGAGGAAGAAG AGGAAGAAGACCTTCCAGAAACTGGTGGCGGAGTAGCTACATTATTGCCAGGCATCGGTGGACTAGTAGCTGCTGGTGGT GCTTGGTTAGTTATTAGTAGAAGGAAATAA
Upstream 100 bases:
>100_bases ATTTTCATAAATAACATTTTAAGGAAGGAATTATAAAATATTTGTAGAACAATAGTAATGTAATAAGGACCAATATATTA TGAAATGGGAGGGAGTACTT
Downstream 100 bases:
>100_bases CCTATAACCCGTTTTATTCTTCATTTTCCTTTTAACACAAATCTACACGAGGGTGAAATGCTGTGACAGACAAAGTTAAA AATCAGTTACAACACTATAA
Product: LPXTG-motif cell wall anchor domain protein
Products: NA
Alternate protein names: Polyferredoxin
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRRILFSTGFVFVLSLFMVTGAMAFGVDLDNVPDGTYTGAGEGFNEAIEVEVTVEGGEVTNIEAISQEETPEYWEDGKQT MDDIIEAQSTDVDVETGATASSEGIVEAVRDALAGEEVAEEAEEDVEEDVEEEEEEDLPETGGGVATLLPGIGGLVAAGG AWLVISRRK
Sequences:
>Translated_169_residues MRRILFSTGFVFVLSLFMVTGAMAFGVDLDNVPDGTYTGAGEGFNEAIEVEVTVEGGEVTNIEAISQEETPEYWEDGKQT MDDIIEAQSTDVDVETGATASSEGIVEAVRDALAGEEVAEEAEEDVEEDVEEEEEEDLPETGGGVATLLPGIGGLVAAGG AWLVISRRK >Mature_169_residues MRRILFSTGFVFVLSLFMVTGAMAFGVDLDNVPDGTYTGAGEGFNEAIEVEVTVEGGEVTNIEAISQEETPEYWEDGKQT MDDIIEAQSTDVDVETGATASSEGIVEAVRDALAGEEVAEEAEEDVEEDVEEEEEEDLPETGGGVATLLPGIGGLVAAGG AWLVISRRK
Specific function: Unknown
COG id: COG3976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17896; Mature: 17896
Theoretical pI: Translated: 3.38; Mature: 3.38
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILFSTGFVFVLSLFMVTGAMAFGVDLDNVPDGTYTGAGEGFNEAIEVEVTVEGGEVT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC NIEAISQEETPEYWEDGKQTMDDIIEAQSTDVDVETGATASSEGIVEAVRDALAGEEVAE CHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHH EAEEDVEEDVEEEEEEDLPETGGGVATLLPGIGGLVAAGGAWLVISRRK HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHCCCEEEEEECCC >Mature Secondary Structure MRRILFSTGFVFVLSLFMVTGAMAFGVDLDNVPDGTYTGAGEGFNEAIEVEVTVEGGEVT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC NIEAISQEETPEYWEDGKQTMDDIIEAQSTDVDVETGATASSEGIVEAVRDALAGEEVAE CHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHH EAEEDVEEDVEEEEEEDLPETGGGVATLLPGIGGLVAAGGAWLVISRRK HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA