| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is bfr [H]
Identifier: 188586697
GI number: 188586697
Start: 2207432
End: 2207941
Strand: Direct
Name: bfr [H]
Synonym: Nther_2087
Alternate gene names: 188586697
Gene position: 2207432-2207941 (Clockwise)
Preceding gene: 188586696
Following gene: 188586698
Centisome position: 69.73
GC content: 35.49
Gene sequence:
>510_bases ATGAGTAAGCAAAATCGTGAGCAAAAGAAACAAAAAGTAATTGAGGTGTTGAACAAAGCACGATCTATGGAATTACAGGC AATCCATCAATATATGAACCAACATTATTCTCTAGATGACAAAGATTACGGTGAATTTGCTACTAAAATTAGAACCATTG CCATTGACGAAATGAGACATGCAGAGACCTTTGCAGAACGTGTTAAAGAACTAGATGGAGAACCTACCACTGAATTAGCT GGTGGAGTTGAAAAAAATCAAGATGTAGAAAAGATTTTCCCTTTCGATTCTGAACAAGAAGAAGAAGCTATCGAAACATA CAATGAATTTGCTCAAATCTGCAGAGAAAATAATGATACAATTTCAGCTAAGCTGTTCGAAACAATCATTGAAGAAGAAC AACAACATCAAAATTACTTCGATGATATTGACGACCACATCAAAAACTTAGGTAATACATACCTGGCTAGAATGGTTGGA ACTGCAGAAGGAGAAGGTGGAGAAGAATAA
Upstream 100 bases:
>100_bases TTAATTTTCAAATACTAAGGAAGGATTATAAAATGTGAAAATAGAAATACTTGGATTAGATGAAAATATTTTTTCAATAT AGGTTAAAGGAGGAGTTTTA
Downstream 100 bases:
>100_bases CTACCAAAAGCAAAAGGCCTGGACTAAAAAGTCCAGGCTTTTTTTATTCAAGATTTCTGAACCGTGAACCGTGAATGTCG GACATTGTAAAAAGCTAAAA
Product: Ferritin Dps family protein
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRHAETFAERVKELDGEPTTELA GGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDTISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVG TAEGEGGEE
Sequences:
>Translated_169_residues MSKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRHAETFAERVKELDGEPTTELA GGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDTISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVG TAEGEGGEE >Mature_168_residues SKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRHAETFAERVKELDGEPTTELAG GVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDTISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVGT AEGEGGEE
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
None
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 19628; Mature: 19497
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AETFAERVKELDGEPTTELAGGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDT HHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH ISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVGTAEGEGGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AETFAERVKELDGEPTTELAGGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDT HHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH ISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVGTAEGEGGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11454214; 10841764; 11034331; 11173495; 12627224 [H]