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The map label for this gene is hhoB [H]

Identifier: 188586673

GI number: 188586673

Start: 2180863

End: 2181789

Strand: Reverse

Name: hhoB [H]

Synonym: Nther_2063

Alternate gene names: 188586673

Gene position: 2181789-2180863 (Counterclockwise)

Preceding gene: 188586674

Following gene: 188586672

Centisome position: 68.92

GC content: 36.25

Gene sequence:

>927_bases
ATGAAGAATTGGAACCAAAACAAAAATAGAAATGAAAAAGAATTCGAATATAAGGAGAATAATCATTTAGATAGGGATGA
AGAGTTTGAAAATGAAGAATTAGAAGATGAAGAATTTTATTTTCCTGAAGAATACTGGGACTTTGAATTTGATGAAGAAG
ACGATGAGGACTGGACTGAGTTTGATGAAAGAAAAAGCAAGATTCGAAAAATATTTACAGCGGCTGTGTTAGTGATGTTT
GTTATTACAGCTATGACCGGAGTATTTAATGTTTTAGCTAATTTTCCTATTGATGCGTATTTAGAATCTTTGGATTTGAG
AGATAACCCCCAAGTAAAAGAACTGAAAAAAAGTGTTGTTATGGTATCAGGACATGGAGAAGCCCAAAAAAACTCTATTT
CTACAAGACAGGCGGGCTCTGGTTTTAATATTGATCCTTCGGGTAAAATACTGACTAATCGTCATGTTGTTGAAGACGCT
ACTAATATTTCCGTGAATTTCAGAGAAGAAGAAAAGGGATTTCCTGTTGAGGAATGGCACGGTGCTCCTTACCCAAATAT
CGATATGGCTATTTTAGAAATTCAGGGAGAAAATTTACCCTATGTTGAGCTTAAGGATGATCCGATCGCATCTTTAGACA
AAGGTCAAGATGTTTTGATTATTGGTAATCCCAGGGGGATAGGGAGCCTGGCTGTAGAAGGTGAACTCATGAAAATTCAC
GAACTTTCCGGGACACCTCATAGTATTTTAGAAATAGATGCCCATATTCATCCTGGACATAGTGGTAGCCCTGTATTTGA
TGCAGAAGGTGAAGTAGTGGGAATTATATACGCTTCGCGTGAAACAAATGATGGTAAACAAGTAGGTTTAGCAGTTTCTT
TAAAAGACGTGAAAGATCTAGAAAAATTTAAGGATAGAGGGGAATAA

Upstream 100 bases:

>100_bases
AAGAATAATAGACTTTTAGTATTAAGCTGAGTTTAAACTTGAATGTTGATTATTGAAAAAAATAAAGCACCTTTATTAGA
GTGTTTGGCAGGTGGCTAAA

Downstream 100 bases:

>100_bases
TTGTAACTTTATCCTTATTTTGTGCTATAATAATACTAACAATAGAAAAAGGGGAGTTTTATCTAATTACTTACCTTATA
GTCCCGATTTCTAGGGACTT

Product: peptidase S1 and S6 chymotrypsin/Hap

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKNWNQNKNRNEKEFEYKENNHLDRDEEFENEELEDEEFYFPEEYWDFEFDEEDDEDWTEFDERKSKIRKIFTAAVLVMF
VITAMTGVFNVLANFPIDAYLESLDLRDNPQVKELKKSVVMVSGHGEAQKNSISTRQAGSGFNIDPSGKILTNRHVVEDA
TNISVNFREEEKGFPVEEWHGAPYPNIDMAILEIQGENLPYVELKDDPIASLDKGQDVLIIGNPRGIGSLAVEGELMKIH
ELSGTPHSILEIDAHIHPGHSGSPVFDAEGEVVGIIYASRETNDGKQVGLAVSLKDVKDLEKFKDRGE

Sequences:

>Translated_308_residues
MKNWNQNKNRNEKEFEYKENNHLDRDEEFENEELEDEEFYFPEEYWDFEFDEEDDEDWTEFDERKSKIRKIFTAAVLVMF
VITAMTGVFNVLANFPIDAYLESLDLRDNPQVKELKKSVVMVSGHGEAQKNSISTRQAGSGFNIDPSGKILTNRHVVEDA
TNISVNFREEEKGFPVEEWHGAPYPNIDMAILEIQGENLPYVELKDDPIASLDKGQDVLIIGNPRGIGSLAVEGELMKIH
ELSGTPHSILEIDAHIHPGHSGSPVFDAEGEVVGIIYASRETNDGKQVGLAVSLKDVKDLEKFKDRGE
>Mature_308_residues
MKNWNQNKNRNEKEFEYKENNHLDRDEEFENEELEDEEFYFPEEYWDFEFDEEDDEDWTEFDERKSKIRKIFTAAVLVMF
VITAMTGVFNVLANFPIDAYLESLDLRDNPQVKELKKSVVMVSGHGEAQKNSISTRQAGSGFNIDPSGKILTNRHVVEDA
TNISVNFREEEKGFPVEEWHGAPYPNIDMAILEIQGENLPYVELKDDPIASLDKGQDVLIIGNPRGIGSLAVEGELMKIH
ELSGTPHSILEIDAHIHPGHSGSPVFDAEGEVVGIIYASRETNDGKQVGLAVSLKDVKDLEKFKDRGE

Specific function: A putative protease, its function overlaps that of the related putative proteases HtrA and HhoA [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 35020; Mature: 35020

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNWNQNKNRNEKEFEYKENNHLDRDEEFENEELEDEEFYFPEEYWDFEFDEEDDEDWTE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHH
FDERKSKIRKIFTAAVLVMFVITAMTGVFNVLANFPIDAYLESLDLRDNPQVKELKKSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCEE
MVSGHGEAQKNSISTRQAGSGFNIDPSGKILTNRHVVEDATNISVNFREEEKGFPVEEWH
EEECCCCCHHCCCCHHCCCCCCCCCCCCCEEECCEEECCCCEEEEEEEHHCCCCCHHHCC
GAPYPNIDMAILEIQGENLPYVELKDDPIASLDKGQDVLIIGNPRGIGSLAVEGELMKIH
CCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEEE
ELSGTPHSILEIDAHIHPGHSGSPVFDAEGEVVGIIYASRETNDGKQVGLAVSLKDVKDL
ECCCCCCEEEEEEEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEHHHHHHH
EKFKDRGE
HHHHHCCC
>Mature Secondary Structure
MKNWNQNKNRNEKEFEYKENNHLDRDEEFENEELEDEEFYFPEEYWDFEFDEEDDEDWTE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHH
FDERKSKIRKIFTAAVLVMFVITAMTGVFNVLANFPIDAYLESLDLRDNPQVKELKKSVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCEE
MVSGHGEAQKNSISTRQAGSGFNIDPSGKILTNRHVVEDATNISVNFREEEKGFPVEEWH
EEECCCCCHHCCCCHHCCCCCCCCCCCCCEEECCEEECCCCEEEEEEEHHCCCCCHHHCC
GAPYPNIDMAILEIQGENLPYVELKDDPIASLDKGQDVLIIGNPRGIGSLAVEGELMKIH
CCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEEE
ELSGTPHSILEIDAHIHPGHSGSPVFDAEGEVVGIIYASRETNDGKQVGLAVSLKDVKDL
ECCCCCCEEEEEEEEECCCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEEEHHHHHHH
EKFKDRGE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]