| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is glcK [H]
Identifier: 188586615
GI number: 188586615
Start: 2113418
End: 2114185
Strand: Reverse
Name: glcK [H]
Synonym: Nther_2005
Alternate gene names: 188586615
Gene position: 2114185-2113418 (Counterclockwise)
Preceding gene: 188586616
Following gene: 188586614
Centisome position: 66.79
GC content: 38.41
Gene sequence:
>768_bases ATGTTAGAATGTCAAAACCAAGACAAAAACAATGTTATAGGTTTAGGGATAGGAGTGCCCGGATTTGTTCCATTAAAAGG AGATAGGATACCGCAATTAGTTAACATGGGTTTAGAAAATGTTCCCTTGAAATTCAAATTAGAGCAAAAATTTAATGCAC ATGTTCTTGTAGAGAATGATGCAAATGCTGCTGCATGGGGAGAACATAAAGCCGGGGCTTCACAAGGAACCCGGGACAAT CTATTAATAACTTTAGGTACAGGAGTAGGTAGTGGCGTAATTGTAAACGAGGCAATTCATCGTGGAAACTTAGGTTTGAC TGGGGAGATAGGACATATATTGGTGAGACCTATAGATGGAAAGCTTTGTAACTGTGGAAAAGTTGGCTGTTTAGAAACAG AATGTTCAGGTGTTGCTATTGAAAGTAAAGCTAAAGCTCTATATGATGAGCATCAGTTGACAGCACGGGAAGTCTTTAAC AGGGCCGATAATGGAGACGAAACTGCAAAAAGAGTAATTCAAGAAGCATCGTATTACTTAGCCTGGGGGATATCCCATGC TTTACATGTATTGGAGTTTGAAGTTGTTGTATTAGGTGGTGGAATTTCCAGAGGAGGGAATTTATTATTACAGCCAGTCA GAGCTTATTTAGAGGATTTTATGGGGGACTGTCCTGAATTTCCCACAGAAAAGGTGTTAGTCTCTAAACTCGGGAATAAA GTTGCTCTACATGGATTGTATTATTTAATATATGAAAAGATAAACTAA
Upstream 100 bases:
>100_bases TAATACTTCAAGTAATTTAATATTCGAGGCAAACCGATCTTCACGAAATGTAAATAGTGTCGATGAATTAGTTGATATAA TAGAAGATTTAGCCCAGGAA
Downstream 100 bases:
>100_bases AATTCATAGTATAAAATGGCCTGGAAGTAAAATCAAAATTAATTAGAATGAGCTTAAGGGGGTACTTTCAGTGAAAAAAA TTGGAGTTTTAACCAGTGGA
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLECQNQDKNNVIGLGIGVPGFVPLKGDRIPQLVNMGLENVPLKFKLEQKFNAHVLVENDANAAAWGEHKAGASQGTRDN LLITLGTGVGSGVIVNEAIHRGNLGLTGEIGHILVRPIDGKLCNCGKVGCLETECSGVAIESKAKALYDEHQLTAREVFN RADNGDETAKRVIQEASYYLAWGISHALHVLEFEVVVLGGGISRGGNLLLQPVRAYLEDFMGDCPEFPTEKVLVSKLGNK VALHGLYYLIYEKIN
Sequences:
>Translated_255_residues MLECQNQDKNNVIGLGIGVPGFVPLKGDRIPQLVNMGLENVPLKFKLEQKFNAHVLVENDANAAAWGEHKAGASQGTRDN LLITLGTGVGSGVIVNEAIHRGNLGLTGEIGHILVRPIDGKLCNCGKVGCLETECSGVAIESKAKALYDEHQLTAREVFN RADNGDETAKRVIQEASYYLAWGISHALHVLEFEVVVLGGGISRGGNLLLQPVRAYLEDFMGDCPEFPTEKVLVSKLGNK VALHGLYYLIYEKIN >Mature_255_residues MLECQNQDKNNVIGLGIGVPGFVPLKGDRIPQLVNMGLENVPLKFKLEQKFNAHVLVENDANAAAWGEHKAGASQGTRDN LLITLGTGVGSGVIVNEAIHRGNLGLTGEIGHILVRPIDGKLCNCGKVGCLETECSGVAIESKAKALYDEHQLTAREVFN RADNGDETAKRVIQEASYYLAWGISHALHVLEFEVVVLGGGISRGGNLLLQPVRAYLEDFMGDCPEFPTEKVLVSKLGNK VALHGLYYLIYEKIN
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI4885285, Length=204, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI190014632, Length=204, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI298566325, Length=205, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI298566315, Length=205, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1786891, Length=232, Percent_Identity=30.1724137931034, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI87081733, Length=245, Percent_Identity=29.3877551020408, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082127, Length=218, Percent_Identity=28.4403669724771, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787363, Length=203, Percent_Identity=32.512315270936, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87082230, Length=166, Percent_Identity=37.9518072289157, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1787878, Length=215, Percent_Identity=26.9767441860465, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790522, Length=224, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 27586; Mature: 27586
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLECQNQDKNNVIGLGIGVPGFVPLKGDRIPQLVNMGLENVPLKFKLEQKFNAHVLVEND CCCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEECC ANAAAWGEHKAGASQGTRDNLLITLGTGVGSGVIVNEAIHRGNLGLTGEIGHILVRPIDG CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHCCCCCCEECCCEEEEEECCC KLCNCGKVGCLETECSGVAIESKAKALYDEHQLTAREVFNRADNGDETAKRVIQEASYYL CEECCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHE AWGISHALHVLEFEVVVLGGGISRGGNLLLQPVRAYLEDFMGDCPEFPTEKVLVSKLGNK EHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH VALHGLYYLIYEKIN HHHHHHEEEEEEECC >Mature Secondary Structure MLECQNQDKNNVIGLGIGVPGFVPLKGDRIPQLVNMGLENVPLKFKLEQKFNAHVLVEND CCCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEECC ANAAAWGEHKAGASQGTRDNLLITLGTGVGSGVIVNEAIHRGNLGLTGEIGHILVRPIDG CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHCCCCCCEECCCEEEEEECCC KLCNCGKVGCLETECSGVAIESKAKALYDEHQLTAREVFNRADNGDETAKRVIQEASYYL CEECCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHE AWGISHALHVLEFEVVVLGGGISRGGNLLLQPVRAYLEDFMGDCPEFPTEKVLVSKLGNK EHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH VALHGLYYLIYEKIN HHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]