| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is aprX [H]
Identifier: 188586243
GI number: 188586243
Start: 1706686
End: 1707984
Strand: Direct
Name: aprX [H]
Synonym: Nther_1626
Alternate gene names: 188586243
Gene position: 1706686-1707984 (Clockwise)
Preceding gene: 188586233
Following gene: 188586244
Centisome position: 53.91
GC content: 37.03
Gene sequence:
>1299_bases ATGATAAGAGATAGTGCTTGGATACCAAATTACAATTATAAATTATGCCCCAAGTTAAAAAATGAGCTATACGAGAATTA TAAGCCATCTAAGATGGTGCCTACTGTTTTTTACAATTCATATAAGCAGATAAAGAAAAAAATTCGTAAGTTTCCTGTGA TCGTACAAGTTAAATTTACTAAGGATAATCTGACAATTATGGACCAAGTAGCAAGTCTGGCTCAATGTCGTATTAAGAAG AAATATTATACTATTTTCTCTTTTTCTACCGACCTCACTGAAGTGCAATTAAAGAAATTGCTTGCAGATGACAAAGTTAT TAAAGTTTGGTACGACGGCGAAGTCACTGGATTACTCGAAAAAGCTTCTAAAACAGTAAATGCCAATAAACTGTGGGATT TAGAATTGACTGGAGAGAAAGTTACAATTGCTGTCTTGGATACTGGTGTTTATGAACATCCTTGTTTTGAAAATAGAATC AAAAAGTTTCGGGATTTCGTAAATAATGGCAAGAAAACTTACGATGACAACGGGCACGGAACTCATGTAGCAGGTTGCAT TGCTAGCAAACAAAATGAAGATTTTGGAGGGGTAGCCCCAAAGGCTGAAATTGTAGGAGTAAAAGTTTTAAACAAACTTG GGTCTGGCAGACTTTCAAATGTTTTAGATGGAATCCAATGGTGTATTGAAAACAAAGAAAATCTAAACTTACAAATTATG AATTTATCCCTTGGTTTTCCTACTCAAGAGTCTTACCGTGACGATCCTCTTTGCCAAATGGTTGAAAAGGCTTGGGAAGC AGGTATTGTTGTCTGCGCTGCTGCCGGCAACAGCGGACCAGATAACGAAACTATAAATTCGCCAGGTATTCATCCTCAGA TTATTACTGTTGGTGCTTCAAATGATAGGAATGCTGATTATCCCGAAGATAATATAATAGCTGATTTTTCAAGTCGTGGA CCCACTAGAGATGGTCACAAAAAACCCGATGTAGTCGCCCCTGGAGTTGACATAGTTTCATTAAGATCTCCAAGTTCATT CCTAGATAAAGTTGAACCAGGTTCTAGAATAGGTGAAGATCGTTTCATCTTCTCTGGAACTTCTATGGCTACTCCTATTT GTGTGGGAGCTATAGCACAACTACTTCATTATAATAAAGACCTTGAGCCAGATGAGATAAAGTCATTGTTGATGGGTAAT GCCAGGGAAATTCCCGGTGTGAATAGAGAAAGTCAAGGTACAGGTATCATAGATTCCAAAGAAATTCAAAGCAATATCAG GGAATTTTCTGATAGTTGA
Upstream 100 bases:
>100_bases AAAATTTATAAAATCTCATTTAATCTCGAAAAGTTAACAAATTTTTTCCCCTCTACATAAAGTGAATTATTACAATTTAT ATGTATGGAGGGGGAACTAA
Downstream 100 bases:
>100_bases GATAACATTAGTTTCCTTCATCAGAAAAAGTTCACTATTCAAAAGTGAATAGCATAGTTTGTAATAAAAATCAGGAGGTG ATTTTTTGAGTAGACACTGG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MIRDSAWIPNYNYKLCPKLKNELYENYKPSKMVPTVFYNSYKQIKKKIRKFPVIVQVKFTKDNLTIMDQVASLAQCRIKK KYYTIFSFSTDLTEVQLKKLLADDKVIKVWYDGEVTGLLEKASKTVNANKLWDLELTGEKVTIAVLDTGVYEHPCFENRI KKFRDFVNNGKKTYDDNGHGTHVAGCIASKQNEDFGGVAPKAEIVGVKVLNKLGSGRLSNVLDGIQWCIENKENLNLQIM NLSLGFPTQESYRDDPLCQMVEKAWEAGIVVCAAAGNSGPDNETINSPGIHPQIITVGASNDRNADYPEDNIIADFSSRG PTRDGHKKPDVVAPGVDIVSLRSPSSFLDKVEPGSRIGEDRFIFSGTSMATPICVGAIAQLLHYNKDLEPDEIKSLLMGN AREIPGVNRESQGTGIIDSKEIQSNIREFSDS
Sequences:
>Translated_432_residues MIRDSAWIPNYNYKLCPKLKNELYENYKPSKMVPTVFYNSYKQIKKKIRKFPVIVQVKFTKDNLTIMDQVASLAQCRIKK KYYTIFSFSTDLTEVQLKKLLADDKVIKVWYDGEVTGLLEKASKTVNANKLWDLELTGEKVTIAVLDTGVYEHPCFENRI KKFRDFVNNGKKTYDDNGHGTHVAGCIASKQNEDFGGVAPKAEIVGVKVLNKLGSGRLSNVLDGIQWCIENKENLNLQIM NLSLGFPTQESYRDDPLCQMVEKAWEAGIVVCAAAGNSGPDNETINSPGIHPQIITVGASNDRNADYPEDNIIADFSSRG PTRDGHKKPDVVAPGVDIVSLRSPSSFLDKVEPGSRIGEDRFIFSGTSMATPICVGAIAQLLHYNKDLEPDEIKSLLMGN AREIPGVNRESQGTGIIDSKEIQSNIREFSDS >Mature_432_residues MIRDSAWIPNYNYKLCPKLKNELYENYKPSKMVPTVFYNSYKQIKKKIRKFPVIVQVKFTKDNLTIMDQVASLAQCRIKK KYYTIFSFSTDLTEVQLKKLLADDKVIKVWYDGEVTGLLEKASKTVNANKLWDLELTGEKVTIAVLDTGVYEHPCFENRI KKFRDFVNNGKKTYDDNGHGTHVAGCIASKQNEDFGGVAPKAEIVGVKVLNKLGSGRLSNVLDGIQWCIENKENLNLQIM NLSLGFPTQESYRDDPLCQMVEKAWEAGIVVCAAAGNSGPDNETINSPGIHPQIITVGASNDRNADYPEDNIIADFSSRG PTRDGHKKPDVVAPGVDIVSLRSPSSFLDKVEPGSRIGEDRFIFSGTSMATPICVGAIAQLLHYNKDLEPDEIKSLLMGN AREIPGVNRESQGTGIIDSKEIQSNIREFSDS
Specific function: Displays serine protease activity. Seems to have a broad substrate specificity [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasm (Probable). Note=Is leaked to the culture medium during the late stationary phase owing to cell lysis [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=313, Percent_Identity=34.8242811501597, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI186972143, Length=336, Percent_Identity=27.6785714285714, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17533391, Length=260, Percent_Identity=28.0769230769231, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319893, Length=271, Percent_Identity=38.0073800738007, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6320775, Length=268, Percent_Identity=35.8208955223881, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324576, Length=265, Percent_Identity=34.7169811320755, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI45550681, Length=300, Percent_Identity=33.6666666666667, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24653270, Length=278, Percent_Identity=27.3381294964029, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI17137360, Length=278, Percent_Identity=27.3381294964029, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 48094; Mature: 48094
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDSAWIPNYNYKLCPKLKNELYENYKPSKMVPTVFYNSYKQIKKKIRKFPVIVQVKFT CCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEE KDNLTIMDQVASLAQCRIKKKYYTIFSFSTDLTEVQLKKLLADDKVIKVWYDGEVTGLLE CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHH KASKTVNANKLWDLELTGEKVTIAVLDTGVYEHPCFENRIKKFRDFVNNGKKTYDDNGHG HHHHCCCCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC THVAGCIASKQNEDFGGVAPKAEIVGVKVLNKLGSGRLSNVLDGIQWCIENKENLNLQIM CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE NLSLGFPTQESYRDDPLCQMVEKAWEAGIVVCAAAGNSGPDNETINSPGIHPQIITVGAS EEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECC NDRNADYPEDNIIADFSSRGPTRDGHKKPDVVAPGVDIVSLRSPSSFLDKVEPGSRIGED CCCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHHHCCCCCCCCCC RFIFSGTSMATPICVGAIAQLLHYNKDLEPDEIKSLLMGNAREIPGVNRESQGTGIIDSK CEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH EIQSNIREFSDS HHHHHHHHHCCC >Mature Secondary Structure MIRDSAWIPNYNYKLCPKLKNELYENYKPSKMVPTVFYNSYKQIKKKIRKFPVIVQVKFT CCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEE KDNLTIMDQVASLAQCRIKKKYYTIFSFSTDLTEVQLKKLLADDKVIKVWYDGEVTGLLE CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHH KASKTVNANKLWDLELTGEKVTIAVLDTGVYEHPCFENRIKKFRDFVNNGKKTYDDNGHG HHHHCCCCCEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC THVAGCIASKQNEDFGGVAPKAEIVGVKVLNKLGSGRLSNVLDGIQWCIENKENLNLQIM CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE NLSLGFPTQESYRDDPLCQMVEKAWEAGIVVCAAAGNSGPDNETINSPGIHPQIITVGAS EEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECC NDRNADYPEDNIIADFSSRGPTRDGHKKPDVVAPGVDIVSLRSPSSFLDKVEPGSRIGED CCCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCHHHHHHCCCCCCCCCC RFIFSGTSMATPICVGAIAQLLHYNKDLEPDEIKSLLMGNAREIPGVNRESQGTGIIDSK CEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH EIQSNIREFSDS HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]