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The map label for this gene is pknB [H]

Identifier: 188586143

GI number: 188586143

Start: 1597480

End: 1598964

Strand: Reverse

Name: pknB [H]

Synonym: Nther_1520

Alternate gene names: 188586143

Gene position: 1598964-1597480 (Counterclockwise)

Preceding gene: 188586144

Following gene: 188586140

Centisome position: 50.51

GC content: 25.12

Gene sequence:

>1485_bases
ATGAATTATACTGAATACATAAAATTGTTAAGATATTTTGATAATTATCTTTGGGATAAAAAAGTTGGAGAAACCAATTA
TAATTATAATGGATTAATATTAGATGCTTATTTCGAACTGTCTATCTTAAGTATTGATTACCTTGATATTGAAGATTTTT
TTGATTGTAATGGAAAATTTAAGTACGATGAAACTAAATTACTTTCCGAACAATTTAAAGAAGTAAAAAATCCTGATAAA
AAATTAAAGCTTATAGAAAATATTTTAAATATATTTAATTTATCCTCATATAATACAGAGGTTTCAGAAACTATTAATTC
TAAAACTTTAGTATTTTTAAAAAGAAACAGAATAATGATCAATAATTTTTCTAACGGTTTTTTGGCATTGAAATATAATA
ACATTGTTGATGAAGGTTCTTATTGTTCTATAATCAAAGTTCATGAGGGAATTTTAAGAAAAGAGTTGAAACCATTTTAT
CGAGAAAATCCAGATTTTCAAAAGAGGATGAAATATGAATATGAAAATATGTTAAAGTTACATGACTGTCCTTACGTTTT
AAATGTATACGGTTACGACTCAGAAACCCATTCTTATTTAATGGAAGAAGCTGATATGAATTTACATGAATATATAACAA
CTGAAATAAATATTCCATTTGAGCAAAAAATGAAGATTATATATGATGTATTAAATGGAATGAAGTACGCTCATAATCAT
AGTATAATTCATAGAGATTTACACCTTGGCAATATATTAAAATTACGAAATGACTTCGTATTATGTGATTTCGGATTGAG
TAAAGATGAATCAATAGAGAGAAGTCTAAAATCATCTTCAACAGAGAAGAATAATCATATATTTCTTGATCCATTAGCGA
TTGGTGATTTCAAGAAGTTAGATAAAAAAAGTGATATTTACTCTTTAGGAAAAGTCATAGATTATGTTTTTACTGCAAGT
GTTGATGAATCTAAATCACAGCATTTATTCACTTTTGTTGTTGAGAAATGTACTAGTAGGAATAAGGAAAAAAGGTATGA
AACAGTTGATCAGGTATTAAGTGATATTGAGTTGAAATTAAAAGAGCAAAATAGAGAACTGGATAAGAAAAAAGTAGATA
ATAAAATACATAAAGGTATATTTGATATGCAAGTTAGTGATTATATTTTAAGATTAGTACGAAGTGATAGACTATGTGAT
TATTTAGTCAAACATAAATTATATTCATTTGGTAACATTATAGTTCAATTTGAAAAAACAGATCAAATTAATATACTTCA
AACAATTAATTATGGCTATATTGATGCCACAGGATTCGGTCAATTTCATAATTACGATATTTTTGCAAGAATTGCTTATT
TTGTTTGTTTGAATACTGATGAATCTAAAATTTTTTCTATAGCAAAAGATATTTTGGAAGGTTGTGCAGAATATAGGTAT
AACGCTGAAGATTATCTTGATGAAATAGAAAAACTCAATTTATAA

Upstream 100 bases:

>100_bases
TATGAATTTAGAAACATAAAAAGGTAACTTTACCAAACTAAATAGGTAAAAGGTGAATCCTCAAATCACCTAGGTAGTAC
GAAAGTGAGGAGTTTTAATT

Downstream 100 bases:

>100_bases
TATATATAATAGTTAGTGAAAATTGCTATAGAATGTAAAATTACTCAGTCTATTTCTAATAATTTTTTGCAACGTTATAT
TAATTTGCAAAACAAAGGGC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKFKYDETKLLSEQFKEVKNPDK
KLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMINNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFY
RENPDFQKRMKYEYENMLKLHDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH
SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKLDKKSDIYSLGKVIDYVFTAS
VDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKLKEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCD
YLVKHKLYSFGNIIVQFEKTDQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY
NAEDYLDEIEKLNL

Sequences:

>Translated_494_residues
MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKFKYDETKLLSEQFKEVKNPDK
KLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMINNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFY
RENPDFQKRMKYEYENMLKLHDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH
SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKLDKKSDIYSLGKVIDYVFTAS
VDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKLKEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCD
YLVKHKLYSFGNIIVQFEKTDQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY
NAEDYLDEIEKLNL
>Mature_494_residues
MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKFKYDETKLLSEQFKEVKNPDK
KLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMINNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFY
RENPDFQKRMKYEYENMLKLHDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH
SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKLDKKSDIYSLGKVIDYVFTAS
VDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKLKEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCD
YLVKHKLYSFGNIIVQFEKTDQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY
NAEDYLDEIEKLNL

Specific function: Unknown

COG id: COG0515

COG function: function code RTKL; Serine/threonine protein kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 protein kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR005543
- InterPro:   IPR000719
- InterPro:   IPR017441
- InterPro:   IPR017442
- InterPro:   IPR008271
- InterPro:   IPR002290 [H]

Pfam domain/function: PF03793 PASTA; PF00069 Pkinase [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 58498; Mature: 58498

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50011 PROTEIN_KINASE_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKF
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECHHHHHCCCCCC
KYDETKLLSEQFKEVKNPDKKLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCEEEE
NNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFYRENPDFQKRMKYEYENMLKL
EECCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH
HDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH
CCCCEEEEEECCCCHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHHHHHCCHHHCCC
SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKL
CEEEECCCCCHHHEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH
DKKSDIYSLGKVIDYVFTASVDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCDYLVKHKLYSFGNIIVQFEKT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECC
DQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY
CCEEEEEECCCCEEECCCCCCCCCCHHHHEEHHHHEECCCHHHHHHHHHHHHHHHHHCCC
NAEDYLDEIEKLNL
CHHHHHHHHHHCCC
>Mature Secondary Structure
MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKF
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECHHHHHCCCCCC
KYDETKLLSEQFKEVKNPDKKLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCEEEE
NNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFYRENPDFQKRMKYEYENMLKL
EECCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH
HDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH
CCCCEEEEEECCCCHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHHHHHCCHHHCCC
SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKL
CEEEECCCCCHHHEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH
DKKSDIYSLGKVIDYVFTASVDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCDYLVKHKLYSFGNIIVQFEKT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECC
DQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY
CCEEEEEECCCCEEECCCCCCCCCCHHHHEEHHHHEECCCHHHHHHHHHHHHHHHHHCCC
NAEDYLDEIEKLNL
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969512; 11234002 [H]