| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586138
Identifier: 188586138
GI number: 188586138
Start: 1588932
End: 1589945
Strand: Reverse
Name: 188586138
Synonym: Nther_1514
Alternate gene names: NA
Gene position: 1589945-1588932 (Counterclockwise)
Preceding gene: 188586139
Following gene: 188586137
Centisome position: 50.23
GC content: 27.32
Gene sequence:
>1014_bases GTGACCATAATTAAGTTTAATTTAATTGAAAACTCTATGGATTCATTTGAAGAAAGCATAAATTATTATATTAAAGGTAA AGAGTACAATGACAGTAGACAATATAAATATTGTATATTACTTCTTCACCATAGTGCTGAATTGCTACTTAAAGAAGTTT TAAGACAGCAACATGACTCTCTTATATTTGAAGATATTGATAAAATTAATGAAAATAATACTTACGATAAGACAATAAAT TTTTCTCAAGCCTTAAAAAGAATGAAAAATGCTTGTAAAATTGAGTTGGAGCAGAGATACCTTCAATATTTAGATGATTT ATCTAAATATAGAAATCGAATACAACACTATGAGTTTACAATAGAGCATGAATATGCAAAGAGAATAGTAATTAACTCAT TTATTACTATAAAATACATTTTAAAAAATATTTTGGGGGAAAGTTTTGAAGACTATGATGGTATAGTTAGTTTAGAAAGT TTAAAAGAATTAGAACAAGATAAAGACTACCTACAAAAGTATAGAAAAGACGTAAATAATGAAATTAAAAGAAAACAAAT GGAGGTATTAAGATTAGAATATGCACCTGAGAAATTTCTAAAAATACCTTGTCCAAATTGCTCAGAAAAACTGTTGACTA AAAGTAACGATAATACCATTGAATGTCGATTTTGTTTTAGTGACTATGAGGATAGAAATGTTTTATTTGGAGAAGATGAG ATGCTTATAATTAGAGACACAATTTTAAGAGAGCTAAAAAGAAGAATGATAGATATAAATCTTAAAATATGTCCAACTTG TGATTATGAGAGTTTATTGTATATACCCTACAAAGAAGTATGGGAGTGTTTAAGTTGCAATGATGAGTTTATTAGCTGGA ATTGTGATGACTGTGGAGAAACATATCCTGATAGATACCTAAGACTTGCTGCAATATTTAATGGAGAAAATCATGATTAT TATAGTATCTGCTCAGATTGTTCTGAAAGCTCTCAATACGAAGTGTTAAGTTAA
Upstream 100 bases:
>100_bases ATTTTAATTGAGTAGACTCAAATGAATAGGTATCTGATAGAATTGAAGTGGAATTTGGGTACCTAGATAATTAAATTATT AATTGATGGAGGTTGATTAG
Downstream 100 bases:
>100_bases ATTAGTTTGTTGGCTATATAATTATTTTTTTAAAGTTAATCTGTAAACCATTTTAATTCTTTTATTTGTCAACACTCCAC ATAATTTTTTTCTCAAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTIIKFNLIENSMDSFEESINYYIKGKEYNDSRQYKYCILLLHHSAELLLKEVLRQQHDSLIFEDIDKINENNTYDKTIN FSQALKRMKNACKIELEQRYLQYLDDLSKYRNRIQHYEFTIEHEYAKRIVINSFITIKYILKNILGESFEDYDGIVSLES LKELEQDKDYLQKYRKDVNNEIKRKQMEVLRLEYAPEKFLKIPCPNCSEKLLTKSNDNTIECRFCFSDYEDRNVLFGEDE MLIIRDTILRELKRRMIDINLKICPTCDYESLLYIPYKEVWECLSCNDEFISWNCDDCGETYPDRYLRLAAIFNGENHDY YSICSDCSESSQYEVLS
Sequences:
>Translated_337_residues MTIIKFNLIENSMDSFEESINYYIKGKEYNDSRQYKYCILLLHHSAELLLKEVLRQQHDSLIFEDIDKINENNTYDKTIN FSQALKRMKNACKIELEQRYLQYLDDLSKYRNRIQHYEFTIEHEYAKRIVINSFITIKYILKNILGESFEDYDGIVSLES LKELEQDKDYLQKYRKDVNNEIKRKQMEVLRLEYAPEKFLKIPCPNCSEKLLTKSNDNTIECRFCFSDYEDRNVLFGEDE MLIIRDTILRELKRRMIDINLKICPTCDYESLLYIPYKEVWECLSCNDEFISWNCDDCGETYPDRYLRLAAIFNGENHDY YSICSDCSESSQYEVLS >Mature_336_residues TIIKFNLIENSMDSFEESINYYIKGKEYNDSRQYKYCILLLHHSAELLLKEVLRQQHDSLIFEDIDKINENNTYDKTINF SQALKRMKNACKIELEQRYLQYLDDLSKYRNRIQHYEFTIEHEYAKRIVINSFITIKYILKNILGESFEDYDGIVSLESL KELEQDKDYLQKYRKDVNNEIKRKQMEVLRLEYAPEKFLKIPCPNCSEKLLTKSNDNTIECRFCFSDYEDRNVLFGEDEM LIIRDTILRELKRRMIDINLKICPTCDYESLLYIPYKEVWECLSCNDEFISWNCDDCGETYPDRYLRLAAIFNGENHDYY SICSDCSESSQYEVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40508; Mature: 40377
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIKFNLIENSMDSFEESINYYIKGKEYNDSRQYKYCILLLHHSAELLLKEVLRQQHDS CEEEEEEHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH LIFEDIDKINENNTYDKTINFSQALKRMKNACKIELEQRYLQYLDDLSKYRNRIQHYEFT HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHEEE IEHEYAKRIVINSFITIKYILKNILGESFEDYDGIVSLESLKELEQDKDYLQKYRKDVNN EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEHHHHHHHHHHHHHHHHHHHHHHH EIKRKQMEVLRLEYAPEKFLKIPCPNCSEKLLTKSNDNTIECRFCFSDYEDRNVLFGEDE HHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCEEECCCC MLIIRDTILRELKRRMIDINLKICPTCDYESLLYIPYKEVWECLSCNDEFISWNCDDCGE EEEEHHHHHHHHHHHHHCCCEEEECCCCCCCEEECCHHHHHHHHCCCCCEEEECCCCCCC TYPDRYLRLAAIFNGENHDYYSICSDCSESSQYEVLS CCCHHHEEEEEEEECCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TIIKFNLIENSMDSFEESINYYIKGKEYNDSRQYKYCILLLHHSAELLLKEVLRQQHDS EEEEEEHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH LIFEDIDKINENNTYDKTINFSQALKRMKNACKIELEQRYLQYLDDLSKYRNRIQHYEFT HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHEEE IEHEYAKRIVINSFITIKYILKNILGESFEDYDGIVSLESLKELEQDKDYLQKYRKDVNN EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEHHHHHHHHHHHHHHHHHHHHHHH EIKRKQMEVLRLEYAPEKFLKIPCPNCSEKLLTKSNDNTIECRFCFSDYEDRNVLFGEDE HHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCEEECCCC MLIIRDTILRELKRRMIDINLKICPTCDYESLLYIPYKEVWECLSCNDEFISWNCDDCGE EEEEHHHHHHHHHHHHHCCCEEEECCCCCCCEEECCHHHHHHHHCCCCCEEEECCCCCCC TYPDRYLRLAAIFNGENHDYYSICSDCSESSQYEVLS CCCHHHEEEEEEEECCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA