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The map label for this gene is ynbB [H]

Identifier: 188586128

GI number: 188586128

Start: 1576989

End: 1578272

Strand: Direct

Name: ynbB [H]

Synonym: Nther_1503

Alternate gene names: 188586128

Gene position: 1576989-1578272 (Clockwise)

Preceding gene: 188586127

Following gene: 188586130

Centisome position: 49.82

GC content: 39.1

Gene sequence:

>1284_bases
TTGTTGGATTATATAAAGAAGTCAGAGAGATGGGATATAAATGAAGATGTACTAAATGCAGCTGAAAAAGTTATGTATGA
ACTAACTACCAGATTCAGCGAAATTGATAATACCTGTGCCAGTAATCAATTAAAAGTTATCAATGCAATGCAGGAATTAG
GTTTAAGTGAACATCACTTTTCTGGTAGTACGGGTTACGGCTACGGTGATCTTGGAAGAGAATTTGTTGATGATTTAATG
GCTAGGGTTATGGGTACTGAGGATGCCCTAGTTCGGCATTTATGGGTATCGGGTACCCATACTATTTATAGCTGTTTAGC
AAGTCTTTTAAATCAAGGTGATACTTTACTCTCTGTTACTGGAAGGCCTTATGATACTCTGGCCAAATTAATAGGGATTA
CTCAGGATGCTCCTTCTAATTCCTTGATAGAACAAGGAATCAACTATAAAGAAGTGAGTTTAACTGAGGGAGGCTTAATT
GATTATCAAGCAGTAAACACTCGAATCAAAGAATTACAACCAGAAGTGGCCTTTATTCAAAAATCAAGAGGATATAGCAG
TAGAAAAACTTTAACTAATGAGGATATTAAAAAATTGGTATCTTTAATTAAAGAGGCCAGTCCCAACACGAAAATTTTCT
TAGATAATTGCTACGGTGAATTTGTTGAACACAATGAACCTGGAGAATTGGAAATTGATTTGCTGGCGGGTTCATTGATA
AAAAACCCGGGAGGGGGGTTAGCCCCTTATGGCGGATACATAGCTGGAAAGTCCGACTTAGTAGAGCGTGTTTCCTATGA
ACTGACTGCTCCTGGACTGGGGAGGGACATGGGAGCTACTCCCGAAGAATTTAATCGTTTATTTATACAGGGTTTATATA
TGTCTCCTACAACAGTGGCCTCTGCTGTAAAGGGAGCAATATTTAGTGCAGGCTTGTTTCAAGAACTTGGCTATAGTGTA
TCACCTCATCCTGAAGATAAGAGGGGAGATATCATACAAGAGATAAGTTTGCATAACGAAGATAAGTTAAAAGCTTTCAT
TACTGGTATTCAAAAAGCAGGTGTGGTAGATAGTCAGATAGCACCTGAACCAGGGGAGATGCCTGGTTATGACTGTCCTG
TAATGATGGCAGCCGGAACATTTATTCAAGGTGCTTCATTGGAATTAAGTGCTGATGCCCCCCTACGACCTCCCTATCGA
GTTTATCAGCAGGGAGGACTTACTTTTCCACATGCTGTTTTAGGAAGCCTAATTGCAGCAAATTATGTATCTAAAGAATC
ATAA

Upstream 100 bases:

>100_bases
AATATATGCCATGATATAAATAGAAAAAATGCCAATAATTGCTGAGATTTGCGCTTACCCGGGAAATGAAAGAGCTGTAT
ATATTAGGAGGTGGGAAATA

Downstream 100 bases:

>100_bases
GTAAAATACATAAAAAACTCCTCAATCAGTGATAACTTGAGTAACTGATTGGGGAGTTTTTTTGTGAGTTAGTTTCAAGT
TAAATTGCTTATAGTGTTTG

Product: Aluminium resistance family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MLDYIKKSERWDINEDVLNAAEKVMYELTTRFSEIDNTCASNQLKVINAMQELGLSEHHFSGSTGYGYGDLGREFVDDLM
ARVMGTEDALVRHLWVSGTHTIYSCLASLLNQGDTLLSVTGRPYDTLAKLIGITQDAPSNSLIEQGINYKEVSLTEGGLI
DYQAVNTRIKELQPEVAFIQKSRGYSSRKTLTNEDIKKLVSLIKEASPNTKIFLDNCYGEFVEHNEPGELEIDLLAGSLI
KNPGGGLAPYGGYIAGKSDLVERVSYELTAPGLGRDMGATPEEFNRLFIQGLYMSPTTVASAVKGAIFSAGLFQELGYSV
SPHPEDKRGDIIQEISLHNEDKLKAFITGIQKAGVVDSQIAPEPGEMPGYDCPVMMAAGTFIQGASLELSADAPLRPPYR
VYQQGGLTFPHAVLGSLIAANYVSKES

Sequences:

>Translated_427_residues
MLDYIKKSERWDINEDVLNAAEKVMYELTTRFSEIDNTCASNQLKVINAMQELGLSEHHFSGSTGYGYGDLGREFVDDLM
ARVMGTEDALVRHLWVSGTHTIYSCLASLLNQGDTLLSVTGRPYDTLAKLIGITQDAPSNSLIEQGINYKEVSLTEGGLI
DYQAVNTRIKELQPEVAFIQKSRGYSSRKTLTNEDIKKLVSLIKEASPNTKIFLDNCYGEFVEHNEPGELEIDLLAGSLI
KNPGGGLAPYGGYIAGKSDLVERVSYELTAPGLGRDMGATPEEFNRLFIQGLYMSPTTVASAVKGAIFSAGLFQELGYSV
SPHPEDKRGDIIQEISLHNEDKLKAFITGIQKAGVVDSQIAPEPGEMPGYDCPVMMAAGTFIQGASLELSADAPLRPPYR
VYQQGGLTFPHAVLGSLIAANYVSKES
>Mature_427_residues
MLDYIKKSERWDINEDVLNAAEKVMYELTTRFSEIDNTCASNQLKVINAMQELGLSEHHFSGSTGYGYGDLGREFVDDLM
ARVMGTEDALVRHLWVSGTHTIYSCLASLLNQGDTLLSVTGRPYDTLAKLIGITQDAPSNSLIEQGINYKEVSLTEGGLI
DYQAVNTRIKELQPEVAFIQKSRGYSSRKTLTNEDIKKLVSLIKEASPNTKIFLDNCYGEFVEHNEPGELEIDLLAGSLI
KNPGGGLAPYGGYIAGKSDLVERVSYELTAPGLGRDMGATPEEFNRLFIQGLYMSPTTVASAVKGAIFSAGLFQELGYSV
SPHPEDKRGDIIQEISLHNEDKLKAFITGIQKAGVVDSQIAPEPGEMPGYDCPVMMAAGTFIQGASLELSADAPLRPPYR
VYQQGGLTFPHAVLGSLIAANYVSKES

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46553; Mature: 46553

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDYIKKSERWDINEDVLNAAEKVMYELTTRFSEIDNTCASNQLKVINAMQELGLSEHHF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
SGSTGYGYGDLGREFVDDLMARVMGTEDALVRHLWVSGTHTIYSCLASLLNQGDTLLSVT
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEC
GRPYDTLAKLIGITQDAPSNSLIEQGINYKEVSLTEGGLIDYQAVNTRIKELQPEVAFIQ
CCCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCHHHHHHH
KSRGYSSRKTLTNEDIKKLVSLIKEASPNTKIFLDNCYGEFVEHNEPGELEIDLLAGSLI
HHCCCCHHCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEEEEEEHHHHH
KNPGGGLAPYGGYIAGKSDLVERVSYELTAPGLGRDMGATPEEFNRLFIQGLYMSPTTVA
CCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
SAVKGAIFSAGLFQELGYSVSPHPEDKRGDIIQEISLHNEDKLKAFITGIQKAGVVDSQI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
APEPGEMPGYDCPVMMAAGTFIQGASLELSADAPLRPPYRVYQQGGLTFPHAVLGSLIAA
CCCCCCCCCCCCCHHHHCCCEECCCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
NYVSKES
HHHCCCC
>Mature Secondary Structure
MLDYIKKSERWDINEDVLNAAEKVMYELTTRFSEIDNTCASNQLKVINAMQELGLSEHHF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
SGSTGYGYGDLGREFVDDLMARVMGTEDALVRHLWVSGTHTIYSCLASLLNQGDTLLSVT
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEC
GRPYDTLAKLIGITQDAPSNSLIEQGINYKEVSLTEGGLIDYQAVNTRIKELQPEVAFIQ
CCCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCHHHHHHH
KSRGYSSRKTLTNEDIKKLVSLIKEASPNTKIFLDNCYGEFVEHNEPGELEIDLLAGSLI
HHCCCCHHCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEEEEEEHHHHH
KNPGGGLAPYGGYIAGKSDLVERVSYELTAPGLGRDMGATPEEFNRLFIQGLYMSPTTVA
CCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
SAVKGAIFSAGLFQELGYSVSPHPEDKRGDIIQEISLHNEDKLKAFITGIQKAGVVDSQI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
APEPGEMPGYDCPVMMAAGTFIQGASLELSADAPLRPPYRVYQQGGLTFPHAVLGSLIAA
CCCCCCCCCCCCCHHHHCCCEECCCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
NYVSKES
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]