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The map label for this gene is yoaR [H]

Identifier: 188586119

GI number: 188586119

Start: 1564312

End: 1565874

Strand: Direct

Name: yoaR [H]

Synonym: Nther_1493

Alternate gene names: 188586119

Gene position: 1564312-1565874 (Clockwise)

Preceding gene: 188586118

Following gene: 188586121

Centisome position: 49.42

GC content: 34.74

Gene sequence:

>1563_bases
ATGTTTAAAAAGTATTATGACAATTTTGACAAAAAGTCTAAAAAGCTTATCAGTATTGTAATCCCTGTTATGATATTTTT
TATGTTCATGATGTTGGGCCTAGGAGGATATCAACAGTACAGATATCAAAACACTTTTATTCCCGGTATTTCAATTGCTG
GGATTAATATAAGTGAAAAAAGTCATACTCAGGTAAAAAAATTGCTAGAACAAGAGCTTGAAAACATGTCTGATCAAAAG
ATTATTTTAGAACACCAAGAAAACACGTGGGAATACAATTTTCATGAACTCGGGATGGATTGGATGGTTAAAGCTTCCTT
TGATAAAGCCCTTGATAATGATGAATTATCCTTTTTTGAAGGGATAAAGCTGCTGTTAGCTGAAATATCTCAAGATCAAG
AAATCCAATTAGAACATGAACTTGATGAATCTAAAACAAAAAGTATTGTTAGTAATTTGAGAGACGAGATTGCTCAGAAA
CCTCAGGATGCTGAATATCAAGTCAATAAATATGCCCAGTCTGTTTCTATAAAACCCCATCAAAATGGAAAAGAAATCGA
TGAATCAAAATTTATATCTGAATTAAATTACTTACTCGAACAAATAAGCCAAGATCTAAGAAGCTTTACTGATGCTGAAT
TTGTTATAGAAATTCCAACTACCACTGTGGAACCCGACACACTAACAGAAGAATTACAGGAATTGGGGATTGATACCCTG
ATAAGTACCTTTGAAACACATTACGACGAAGATGATGAGCAAAGAGTCACTAATATTGAACTTGCTTCTGAAAAGCTGGA
TAACAAAAAACTAGAGCCAGGAGAAAAATTATCTTTTAATGAAGTCGTAGGTCCCAGAACGAGAGAAAGGGGCTATCAAG
AAGCCCCTGTTATCATAGATGGTGAACTGGTTGATGGTTTAGGCGGAGGTATTTGTCAGGTTTCTACTACTTTGTACAAT
TCTGTTTTAAAGGCAGGTATAATTCCAATAGAAAGGTCTCCTCATGGCATACCAGTAGAATATGTTTCCCTGGGTAGAGA
TGCCGCAGTAGCATACGACTATCTTGACCTGGTGTTTGAAAATCACAGGGACAATGGAATTCTAATATCCACCCTGGTAG
ATGAAAACAGATTGAGGGTCGATATTTACGGAAGCCAAGAATCCCATGATTACACGATAAGAACGGAAGATTATCAAGAA
ATCCACCCGGATACCATCTATTTTTTAAAAACAGATGATGGTGAACGGGTGGAAATTAGTCAAGAAGAAAAACAGGAATT
GTTGGATACCAATGAAAGTGATGAAAATGTGAATGAGAATGATTATGATAATGAAGAAAATGATCTTGAAGAAACCAACA
CAAATAATGATGACAAAGAACACATAGAAGATACTAACTACGAAATCACTGAACTTCAAAGGGGTAGACTTGGTTATCAG
ATAGAAGTCTGGTTACTAACATATAAAAACGATGAAAAAGTTGACAAAGAACATATAGCTACGGATATTTACCCATCAAG
AGATGAAAAATACTTAATCGAATTAGAGGATTCTGATCAATAA

Upstream 100 bases:

>100_bases
CTAGCCATGCTGTAAATTAAATCATTATAATATGCATAGTTATAACCACCTGGCTATACATTATGTTATGAGTAGAATTT
TTATAGCCGGGTGGTTTTAT

Downstream 100 bases:

>100_bases
GTGAATTATAAATTTATTTTATTGATGGAAACATGCCAAGTAGATTCGCAATTAGGACAGATCACTTGATGTAGACAATC
ATTGGAATCATGTTTTACTT

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MFKKYYDNFDKKSKKLISIVIPVMIFFMFMMLGLGGYQQYRYQNTFIPGISIAGINISEKSHTQVKKLLEQELENMSDQK
IILEHQENTWEYNFHELGMDWMVKASFDKALDNDELSFFEGIKLLLAEISQDQEIQLEHELDESKTKSIVSNLRDEIAQK
PQDAEYQVNKYAQSVSIKPHQNGKEIDESKFISELNYLLEQISQDLRSFTDAEFVIEIPTTTVEPDTLTEELQELGIDTL
ISTFETHYDEDDEQRVTNIELASEKLDNKKLEPGEKLSFNEVVGPRTRERGYQEAPVIIDGELVDGLGGGICQVSTTLYN
SVLKAGIIPIERSPHGIPVEYVSLGRDAAVAYDYLDLVFENHRDNGILISTLVDENRLRVDIYGSQESHDYTIRTEDYQE
IHPDTIYFLKTDDGERVEISQEEKQELLDTNESDENVNENDYDNEENDLEETNTNNDDKEHIEDTNYEITELQRGRLGYQ
IEVWLLTYKNDEKVDKEHIATDIYPSRDEKYLIELEDSDQ

Sequences:

>Translated_520_residues
MFKKYYDNFDKKSKKLISIVIPVMIFFMFMMLGLGGYQQYRYQNTFIPGISIAGINISEKSHTQVKKLLEQELENMSDQK
IILEHQENTWEYNFHELGMDWMVKASFDKALDNDELSFFEGIKLLLAEISQDQEIQLEHELDESKTKSIVSNLRDEIAQK
PQDAEYQVNKYAQSVSIKPHQNGKEIDESKFISELNYLLEQISQDLRSFTDAEFVIEIPTTTVEPDTLTEELQELGIDTL
ISTFETHYDEDDEQRVTNIELASEKLDNKKLEPGEKLSFNEVVGPRTRERGYQEAPVIIDGELVDGLGGGICQVSTTLYN
SVLKAGIIPIERSPHGIPVEYVSLGRDAAVAYDYLDLVFENHRDNGILISTLVDENRLRVDIYGSQESHDYTIRTEDYQE
IHPDTIYFLKTDDGERVEISQEEKQELLDTNESDENVNENDYDNEENDLEETNTNNDDKEHIEDTNYEITELQRGRLGYQ
IEVWLLTYKNDEKVDKEHIATDIYPSRDEKYLIELEDSDQ
>Mature_520_residues
MFKKYYDNFDKKSKKLISIVIPVMIFFMFMMLGLGGYQQYRYQNTFIPGISIAGINISEKSHTQVKKLLEQELENMSDQK
IILEHQENTWEYNFHELGMDWMVKASFDKALDNDELSFFEGIKLLLAEISQDQEIQLEHELDESKTKSIVSNLRDEIAQK
PQDAEYQVNKYAQSVSIKPHQNGKEIDESKFISELNYLLEQISQDLRSFTDAEFVIEIPTTTVEPDTLTEELQELGIDTL
ISTFETHYDEDDEQRVTNIELASEKLDNKKLEPGEKLSFNEVVGPRTRERGYQEAPVIIDGELVDGLGGGICQVSTTLYN
SVLKAGIIPIERSPHGIPVEYVSLGRDAAVAYDYLDLVFENHRDNGILISTLVDENRLRVDIYGSQESHDYTIRTEDYQE
IHPDTIYFLKTDDGERVEISQEEKQELLDTNESDENVNENDYDNEENDLEETNTNNDDKEHIEDTNYEITELQRGRLGYQ
IEVWLLTYKNDEKVDKEHIATDIYPSRDEKYLIELEDSDQ

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 60342; Mature: 60342

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKYYDNFDKKSKKLISIVIPVMIFFMFMMLGLGGYQQYRYQNTFIPGISIAGINISEK
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEEECCCH
SHTQVKKLLEQELENMSDQKIILEHQENTWEYNFHELGMDWMVKASFDKALDNDELSFFE
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECHHHCCCCCEEEECHHHHCCCCCHHHHH
GIKLLLAEISQDQEIQLEHELDESKTKSIVSNLRDEIAQKPQDAEYQVNKYAQSVSIKPH
HHHHHHHHCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
QNGKEIDESKFISELNYLLEQISQDLRSFTDAEFVIEIPTTTVEPDTLTEELQELGIDTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHH
ISTFETHYDEDDEQRVTNIELASEKLDNKKLEPGEKLSFNEVVGPRTRERGYQEAPVIID
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCEEEC
GELVDGLGGGICQVSTTLYNSVLKAGIIPIERSPHGIPVEYVSLGRDAAVAYDYLDLVFE
CHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
NHRDNGILISTLVDENRLRVDIYGSQESHDYTIRTEDYQEIHPDTIYFLKTDDGERVEIS
CCCCCCEEEEEEECCCEEEEEEECCCCCCCEEEECCCHHHCCCCEEEEEECCCCCEEECC
QEEKQELLDTNESDENVNENDYDNEENDLEETNTNNDDKEHIEDTNYEITELQRGRLGYQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCHHHHHCCCCCEE
IEVWLLTYKNDEKVDKEHIATDIYPSRDEKYLIELEDSDQ
EEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MFKKYYDNFDKKSKKLISIVIPVMIFFMFMMLGLGGYQQYRYQNTFIPGISIAGINISEK
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEEECCCH
SHTQVKKLLEQELENMSDQKIILEHQENTWEYNFHELGMDWMVKASFDKALDNDELSFFE
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECHHHCCCCCEEEECHHHHCCCCCHHHHH
GIKLLLAEISQDQEIQLEHELDESKTKSIVSNLRDEIAQKPQDAEYQVNKYAQSVSIKPH
HHHHHHHHCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
QNGKEIDESKFISELNYLLEQISQDLRSFTDAEFVIEIPTTTVEPDTLTEELQELGIDTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHH
ISTFETHYDEDDEQRVTNIELASEKLDNKKLEPGEKLSFNEVVGPRTRERGYQEAPVIID
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCEEEC
GELVDGLGGGICQVSTTLYNSVLKAGIIPIERSPHGIPVEYVSLGRDAAVAYDYLDLVFE
CHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
NHRDNGILISTLVDENRLRVDIYGSQESHDYTIRTEDYQEIHPDTIYFLKTDDGERVEIS
CCCCCCEEEEEEECCCEEEEEEECCCCCCCEEEECCCHHHCCCCEEEEEECCCCCEEECC
QEEKQELLDTNESDENVNENDYDNEENDLEETNTNNDDKEHIEDTNYEITELQRGRLGYQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCHHHHHCCCCCEE
IEVWLLTYKNDEKVDKEHIATDIYPSRDEKYLIELEDSDQ
EEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]