| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586092
Identifier: 188586092
GI number: 188586092
Start: 1538173
End: 1539096
Strand: Direct
Name: 188586092
Synonym: Nther_1466
Alternate gene names: NA
Gene position: 1538173-1539096 (Clockwise)
Preceding gene: 188586091
Following gene: 188586093
Centisome position: 48.59
GC content: 35.06
Gene sequence:
>924_bases ATGAGTGAAGAATATGAAGAAGAAAAGCCAATTGAATACAGTGGTATTACTCCTGCTGATATAGGCAAGAAATTACGAAA AGCAAGAGAAGCTCAAAACTTGACAATAGAAGATTTACAAAAACAGACTAAATTGAGAACTAAATACATCAAATCCATTG AAAAAGGCGATTTTTCTGTTTTTCCCGGGGATGTTTATGCAAAAGGTGCTATTAGAAACTATGCCGAAGTTGTTGGTTTA GACTTCATGGAGCTTTGGGAAGACTATGAAAGCGTGTATCAACAAGAATCCGAACAAGAAGATAATAGCAATGAAGAACA AAAAGATAAAGAAGTTAGCTTTTTAAACAGTTTTTCAGATAAATTTATAGCTATATTGCCGGTGTTAGTTAAATTTGTGG CTATAGTACTGGTAATCGGAATAATTGGTTATGGCGTGTATTGGGGATACGATTATCTAGCCGGTATTGAGCTAAATGGC GATGAGATTGAAGAAGAAGCGACTACTCCTGAAAAAGAAGAAACCGAAGATGAAGATCATGAAGAACAAGATGAAGAACA AGACCAAGAAGTCAAGGAAGAACCAAAATTACCATCAATAGAAAGAACATCAGATAATCCAATCACATATACAGTAATTG AACTGGAAGATGAATATGAAATTGAAGATGAAATTGAAGTTATCTTGGAGATTGGGGAACAAGAACAAGGTTGCTGGGTT GGAGCAACAATAGATGGGGAATTCAATGATCTAGGGACTATGGACCGGGAAACAAGTGAAACGTTACATTTTCAAGAATC AATTGAATTCACTTTAGGTAGGCCTGTAAATGCCTCTATTACTGTATTTGATACTGAGTTGGAAATACCAGAAACAACTA GCCCAGAGGATATTATTATTGAACTTGATGAAGATGAAAATTAA
Upstream 100 bases:
>100_bases TCATGAATAAAAATAATAGTAAATTAGATAACTTAGGCAGCTGTTAGGAAAACTACAAGTTAAACATTAATTGTGCAACT TGTGTGAAGGGGTGTTTTTC
Downstream 100 bases:
>100_bases CTTGTTTTGACAGTAATAATACTATATTATATACTGAATTAGACAAATAAGTACAAAAATCGGGGTCACAAACCAAAGAT TGGAAAGGTGGATAAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Xre Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSEEYEEEKPIEYSGITPADIGKKLRKAREAQNLTIEDLQKQTKLRTKYIKSIEKGDFSVFPGDVYAKGAIRNYAEVVGL DFMELWEDYESVYQQESEQEDNSNEEQKDKEVSFLNSFSDKFIAILPVLVKFVAIVLVIGIIGYGVYWGYDYLAGIELNG DEIEEEATTPEKEETEDEDHEEQDEEQDQEVKEEPKLPSIERTSDNPITYTVIELEDEYEIEDEIEVILEIGEQEQGCWV GATIDGEFNDLGTMDRETSETLHFQESIEFTLGRPVNASITVFDTELEIPETTSPEDIIIELDEDEN
Sequences:
>Translated_307_residues MSEEYEEEKPIEYSGITPADIGKKLRKAREAQNLTIEDLQKQTKLRTKYIKSIEKGDFSVFPGDVYAKGAIRNYAEVVGL DFMELWEDYESVYQQESEQEDNSNEEQKDKEVSFLNSFSDKFIAILPVLVKFVAIVLVIGIIGYGVYWGYDYLAGIELNG DEIEEEATTPEKEETEDEDHEEQDEEQDQEVKEEPKLPSIERTSDNPITYTVIELEDEYEIEDEIEVILEIGEQEQGCWV GATIDGEFNDLGTMDRETSETLHFQESIEFTLGRPVNASITVFDTELEIPETTSPEDIIIELDEDEN >Mature_306_residues SEEYEEEKPIEYSGITPADIGKKLRKAREAQNLTIEDLQKQTKLRTKYIKSIEKGDFSVFPGDVYAKGAIRNYAEVVGLD FMELWEDYESVYQQESEQEDNSNEEQKDKEVSFLNSFSDKFIAILPVLVKFVAIVLVIGIIGYGVYWGYDYLAGIELNGD EIEEEATTPEKEETEDEDHEEQDEEQDQEVKEEPKLPSIERTSDNPITYTVIELEDEYEIEDEIEVILEIGEQEQGCWVG ATIDGEFNDLGTMDRETSETLHFQESIEFTLGRPVNASITVFDTELEIPETTSPEDIIIELDEDEN
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35254; Mature: 35123
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEYEEEKPIEYSGITPADIGKKLRKAREAQNLTIEDLQKQTKLRTKYIKSIEKGDFSV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE FPGDVYAKGAIRNYAEVVGLDFMELWEDYESVYQQESEQEDNSNEEQKDKEVSFLNSFSD CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KFIAILPVLVKFVAIVLVIGIIGYGVYWGYDYLAGIELNGDEIEEEATTPEKEETEDEDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCCCCCCCCCCHH EEQDEEQDQEVKEEPKLPSIERTSDNPITYTVIELEDEYEIEDEIEVILEIGEQEQGCWV HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEE GATIDGEFNDLGTMDRETSETLHFQESIEFTLGRPVNASITVFDTELEIPETTSPEDIII EEEECCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECEECCCCCCCCCEEEE ELDEDEN EECCCCC >Mature Secondary Structure SEEYEEEKPIEYSGITPADIGKKLRKAREAQNLTIEDLQKQTKLRTKYIKSIEKGDFSV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE FPGDVYAKGAIRNYAEVVGLDFMELWEDYESVYQQESEQEDNSNEEQKDKEVSFLNSFSD CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KFIAILPVLVKFVAIVLVIGIIGYGVYWGYDYLAGIELNGDEIEEEATTPEKEETEDEDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCCCCCCCCCCHH EEQDEEQDQEVKEEPKLPSIERTSDNPITYTVIELEDEYEIEDEIEVILEIGEQEQGCWV HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEE GATIDGEFNDLGTMDRETSETLHFQESIEFTLGRPVNASITVFDTELEIPETTSPEDIII EEEECCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECEECCCCCCCCCEEEE ELDEDEN EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA