Click here to switch to the map view.

The map label for this gene is rplGA [H]

Identifier: 188586069

GI number: 188586069

Start: 1510803

End: 1511117

Strand: Direct

Name: rplGA [H]

Synonym: Nther_1443

Alternate gene names: 188586069

Gene position: 1510803-1511117 (Clockwise)

Preceding gene: 188586068

Following gene: 188586070

Centisome position: 47.73

GC content: 36.19

Gene sequence:

>315_bases
ATGATGAAAAATGATAATAAAGTAGGTCAACTCCTAGGCATTGCAAGAAAAAGTGGCCAAATTGCACTAGGAAGTAGAGA
AACTTTGACAAAAGTTAGAGAGGGGCATTGCGTCCTGGTGATTGTGGCTGAAGATGCCGGTTTTAGAACTAAAAAAATGT
TGACAGACAAATGTACTCATTACTCTGTTACATTTAAAATTTGGGGTTGTAGTAATGAACTGGCAAAATACTTGGGAAAA
TCTCGAGTAAGTGTTGTAGGAATCAATAATAAAGGTATGGCTAATAAACTTCTCAGTCTTCTGAACGACAATTAG

Upstream 100 bases:

>100_bases
AAAAGGCTCTAAAAAAAGATAAACTTAAAAAAGCATTAAATACTGGTGTCAGTGAGGAAGAAAAAGAAAAAATCCGAACT
GAATGGGATCAATTTCAAAA

Downstream 100 bases:

>100_bases
CTGTGGCCACCCCTTATTCTAAAACTATGACAACGCTTGAGGAGGGCATTAAAATGGAGGTGTCTTAATATGGAAAAAAT
AAGAGTATATCAATTAGCTA

Product: ribosomal protein L7Ae/L30e/S12e/Gadd45

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MMKNDNKVGQLLGIARKSGQIALGSRETLTKVREGHCVLVIVAEDAGFRTKKMLTDKCTHYSVTFKIWGCSNELAKYLGK
SRVSVVGINNKGMANKLLSLLNDN

Sequences:

>Translated_104_residues
MMKNDNKVGQLLGIARKSGQIALGSRETLTKVREGHCVLVIVAEDAGFRTKKMLTDKCTHYSVTFKIWGCSNELAKYLGK
SRVSVVGINNKGMANKLLSLLNDN
>Mature_104_residues
MMKNDNKVGQLLGIARKSGQIALGSRETLTKVREGHCVLVIVAEDAGFRTKKMLTDKCTHYSVTFKIWGCSNELAKYLGK
SRVSVVGINNKGMANKLLSLLNDN

Specific function: Unknown

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004038
- InterPro:   IPR004037 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 11428; Mature: 11428

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNDNKVGQLLGIARKSGQIALGSRETLTKVREGHCVLVIVAEDAGFRTKKMLTDKCTH
CCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCE
YSVTFKIWGCSNELAKYLGKSRVSVVGINNKGMANKLLSLLNDN
EEEEEEEECCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MMKNDNKVGQLLGIARKSGQIALGSRETLTKVREGHCVLVIVAEDAGFRTKKMLTDKCTH
CCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCE
YSVTFKIWGCSNELAKYLGKSRVSVVGINNKGMANKLLSLLNDN
EEEEEEEECCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]