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The map label for this gene is ytxE [H]

Identifier: 188586029

GI number: 188586029

Start: 1474105

End: 1474914

Strand: Direct

Name: ytxE [H]

Synonym: Nther_1403

Alternate gene names: 188586029

Gene position: 1474105-1474914 (Clockwise)

Preceding gene: 188586028

Following gene: 188586030

Centisome position: 46.57

GC content: 41.85

Gene sequence:

>810_bases
ATGCCGAAATTTAATAGGCAACGGCGCAGTGGGAAAGGCAATGATAACAACAAAGGTGGTAGTAACTGGCTTCAAACATA
CGGGGATATGATCACTTTGTTACTGGCCTTTTTCGTTTTACTTTATTCTATTTCTACTGTTGATGCTGAAAAATTCGAAC
GCATGTTAGTATCACTCCATGAAAGTTTTTCAGGAGTGTTACCCGAACATAGGGCTCAAATTCCCCGAGAAGACCCGAAT
ATCACACTGCCAGAACCTAGTGAACGCCAGGTTCCTTCTGAAGAGGAACAGATGATGGAAGATATCTACGATCAATTAGA
AGATTACATAGAAGATGCCGATCTGGCTGAAGTTGTTATGCTTGAAACTGAAGAAAGAGGAATCGTGATACGGTTTCAAG
ACAAAATCTTATTTGATTCAGGAAGGGCCGAGCTCAGGTCAGAATCCCTGGAAATTCTAGGAGATATAGCTGAAATTTTA
GAAGAGATTCCTAACGAAATAAAGGTGGAAGGATTTACTGATGATGTGCCTATTGATACTCCTGAATTCCCTTCTAACTG
GGAGTTATCTGCAGCCCGCGCCACCACTGTTTTACGATACTTAAGCGAAGAAGGTGGTTTAGACCCTGGGAGGTTACAAG
CTACAGGCTATGGTGAATATAGACCTATGGTTCCCAATGACAGTCCAGAGAATCGTCAATTAAACAGAAGAGTAGATATT
ACGGTCTTGTGGTCTGTCTGGGAGCAAGATGACTATTACGACCGAGATACTACAGACCTTTTTGAGAGGGGAGAGGATGA
AATTGAATAA

Upstream 100 bases:

>100_bases
GGCGAGAATCCTAGAATAGTTGAAGAAAAACTAAAGGCCTTTTTAGCTCCTAAATCCAGGGATGAAATAGCCGAAGAGGA
TGAAGAGGTGGTGGACGCCA

Downstream 100 bases:

>100_bases
TAAAGGTTATGTAAATACTATTGGAATTATTATTATTGCCGGGATCATTTTGATAATTCTGGCATCCGGGATAGCATATT
TCATTGCTGTGAGTGTAGCA

Product: OmpA/MotB domain protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MPKFNRQRRSGKGNDNNKGGSNWLQTYGDMITLLLAFFVLLYSISTVDAEKFERMLVSLHESFSGVLPEHRAQIPREDPN
ITLPEPSERQVPSEEEQMMEDIYDQLEDYIEDADLAEVVMLETEERGIVIRFQDKILFDSGRAELRSESLEILGDIAEIL
EEIPNEIKVEGFTDDVPIDTPEFPSNWELSAARATTVLRYLSEEGGLDPGRLQATGYGEYRPMVPNDSPENRQLNRRVDI
TVLWSVWEQDDYYDRDTTDLFERGEDEIE

Sequences:

>Translated_269_residues
MPKFNRQRRSGKGNDNNKGGSNWLQTYGDMITLLLAFFVLLYSISTVDAEKFERMLVSLHESFSGVLPEHRAQIPREDPN
ITLPEPSERQVPSEEEQMMEDIYDQLEDYIEDADLAEVVMLETEERGIVIRFQDKILFDSGRAELRSESLEILGDIAEIL
EEIPNEIKVEGFTDDVPIDTPEFPSNWELSAARATTVLRYLSEEGGLDPGRLQATGYGEYRPMVPNDSPENRQLNRRVDI
TVLWSVWEQDDYYDRDTTDLFERGEDEIE
>Mature_268_residues
PKFNRQRRSGKGNDNNKGGSNWLQTYGDMITLLLAFFVLLYSISTVDAEKFERMLVSLHESFSGVLPEHRAQIPREDPNI
TLPEPSERQVPSEEEQMMEDIYDQLEDYIEDADLAEVVMLETEERGIVIRFQDKILFDSGRAELRSESLEILGDIAEILE
EIPNEIKVEGFTDDVPIDTPEFPSNWELSAARATTVLRYLSEEGGLDPGRLQATGYGEYRPMVPNDSPENRQLNRRVDIT
VLWSVWEQDDYYDRDTTDLFERGEDEIE

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=267, Percent_Identity=28.0898876404494, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 31035; Mature: 30904

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFNRQRRSGKGNDNNKGGSNWLQTYGDMITLLLAFFVLLYSISTVDAEKFERMLVSLH
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ESFSGVLPEHRAQIPREDPNITLPEPSERQVPSEEEQMMEDIYDQLEDYIEDADLAEVVM
HHHHCCCCHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHE
LETEERGIVIRFQDKILFDSGRAELRSESLEILGDIAEILEEIPNEIKVEGFTDDVPIDT
EEECCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCC
PEFPSNWELSAARATTVLRYLSEEGGLDPGRLQATGYGEYRPMVPNDSPENRQLNRRVDI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCEEEE
TVLWSVWEQDDYYDRDTTDLFERGEDEIE
EEEEEECCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PKFNRQRRSGKGNDNNKGGSNWLQTYGDMITLLLAFFVLLYSISTVDAEKFERMLVSLH
CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ESFSGVLPEHRAQIPREDPNITLPEPSERQVPSEEEQMMEDIYDQLEDYIEDADLAEVVM
HHHHCCCCHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHE
LETEERGIVIRFQDKILFDSGRAELRSESLEILGDIAEILEEIPNEIKVEGFTDDVPIDT
EEECCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCC
PEFPSNWELSAARATTVLRYLSEEGGLDPGRLQATGYGEYRPMVPNDSPENRQLNRRVDI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCEEEE
TVLWSVWEQDDYYDRDTTDLFERGEDEIE
EEEEEECCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]