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The map label for this gene is csoR [H]

Identifier: 188585897

GI number: 188585897

Start: 1340862

End: 1341128

Strand: Direct

Name: csoR [H]

Synonym: Nther_1271

Alternate gene names: 188585897

Gene position: 1340862-1341128 (Clockwise)

Preceding gene: 188585895

Following gene: 188585898

Centisome position: 42.36

GC content: 34.08

Gene sequence:

>267_bases
ATGGTAAGTGATAAAAAGGATTTGCAGTTAAGGGTAAAAACAGTGATTGGTCATATGAAGGGAATTGAAAAAATGATTGA
TGAGGACAAGTACTGTATTGATATCATTAACCAAATCTCTGCAGTTCAATCTTCCCTTCGTAAAATTAGTGATCAAATCT
TGGAACAGCACCTACATTCCTGTGTTAAAGGAGCTATTAAAAGAGGAAATGAAGAGGAAGAGGTTTTGGAGGAATTAATG
CAAGTTTTTAAACATCGTGATGACTAA

Upstream 100 bases:

>100_bases
AGATTATATTATACTATCTTAAATTATTCTAGTTTAGATATTTCAATACCTTTAATAAAATAAGTGTCCAAATGGTGATT
AAATATAAGGGGAGGATTTT

Downstream 100 bases:

>100_bases
AAGTAAAATTAAGAGTCTTGGTTTAAGGAGAATCGGTTAATAGCCGATTCTTTTTTTTATTATGTAATTAATAGAGAACA
AAATTAATACATATCTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MVSDKKDLQLRVKTVIGHMKGIEKMIDEDKYCIDIINQISAVQSSLRKISDQILEQHLHSCVKGAIKRGNEEEEVLEELM
QVFKHRDD

Sequences:

>Translated_88_residues
MVSDKKDLQLRVKTVIGHMKGIEKMIDEDKYCIDIINQISAVQSSLRKISDQILEQHLHSCVKGAIKRGNEEEEVLEELM
QVFKHRDD
>Mature_88_residues
MVSDKKDLQLRVKTVIGHMKGIEKMIDEDKYCIDIINQISAVQSSLRKISDQILEQHLHSCVKGAIKRGNEEEEVLEELM
QVFKHRDD

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10206; Mature: 10206

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSDKKDLQLRVKTVIGHMKGIEKMIDEDKYCIDIINQISAVQSSLRKISDQILEQHLHS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVKGAIKRGNEEEEVLEELMQVFKHRDD
HHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSDKKDLQLRVKTVIGHMKGIEKMIDEDKYCIDIINQISAVQSSLRKISDQILEQHLHS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVKGAIKRGNEEEEVLEELMQVFKHRDD
HHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]