| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is stoA [H]
Identifier: 188585889
GI number: 188585889
Start: 1334915
End: 1335502
Strand: Direct
Name: stoA [H]
Synonym: Nther_1263
Alternate gene names: 188585889
Gene position: 1334915-1335502 (Clockwise)
Preceding gene: 188585888
Following gene: 188585890
Centisome position: 42.17
GC content: 36.22
Gene sequence:
>588_bases ATGTTCTTAAAAAAATCATTATTGATAATTCTGCTATTAGTTCTGATGACTGGCTCTTTCCTTTTGTCGGGATGTAATCC AGATATATTGCTAGATGATGAAAAGGAGGCCAAGGAAGAAGAGGAGAAGGAAACTAATGATTTTGAATTTGAAGGAACTG ACGATGATCTTGACGAAGTAGAGTTTGAGGTTTCTTCTCATACTCTCCAAAATTTAGATGGGGATGAAGTAACAGTACCG GATGATTTGGAGGATATAGTCTTAATTAAATTTTGGCAAAGTACTTGTCCTTTGTGTTTAGAGGAGATGGACGCAACTCA GAAGTTACATGATCAAGTAAAAGAAGACGATGATATGGGAATATATACCATCAATGTTATGGAAGATCCTGACGAAATTA CTTCATTTATGGAAAACGAGGGTTATAAATTCCCTGTTCTTTTTGATTCAGATGGTGACATGACGGAAGACTACCAGGTC GTGGGCTTTCCTGTTCAATATCTTGTTAATCAAGACCAAGAAGTTTTGTTTGTTAAACCAGGACCTATGACTTTCGAAGA AATGGAAAGCTTACTTCAACAGAAGTAA
Upstream 100 bases:
>100_bases AGCTTATTAATAGTTATTGGATTTTTAGTCCTTTTTGATAAGTTTGCAGATATTAGTTTATGGCTGTTTAACTTGGTTAA TTAAAGGGGGGAGTATCAAA
Downstream 100 bases:
>100_bases ACTACAATTTTAAATTTGCGAGGTAGTCAATATGACTGATAATGTTTCTGCAGTGATTTTAGCGGGTGGCGCAAGTCGTA GAATGGGAACAGACAAAAGT
Product: Redoxin domain protein
Products: NA
Alternate protein names: Stage IV sporulation protein H [H]
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MFLKKSLLIILLLVLMTGSFLLSGCNPDILLDDEKEAKEEEEKETNDFEFEGTDDDLDEVEFEVSSHTLQNLDGDEVTVP DDLEDIVLIKFWQSTCPLCLEEMDATQKLHDQVKEDDDMGIYTINVMEDPDEITSFMENEGYKFPVLFDSDGDMTEDYQV VGFPVQYLVNQDQEVLFVKPGPMTFEEMESLLQQK
Sequences:
>Translated_195_residues MFLKKSLLIILLLVLMTGSFLLSGCNPDILLDDEKEAKEEEEKETNDFEFEGTDDDLDEVEFEVSSHTLQNLDGDEVTVP DDLEDIVLIKFWQSTCPLCLEEMDATQKLHDQVKEDDDMGIYTINVMEDPDEITSFMENEGYKFPVLFDSDGDMTEDYQV VGFPVQYLVNQDQEVLFVKPGPMTFEEMESLLQQK >Mature_195_residues MFLKKSLLIILLLVLMTGSFLLSGCNPDILLDDEKEAKEEEEKETNDFEFEGTDDDLDEVEFEVSSHTLQNLDGDEVTVP DDLEDIVLIKFWQSTCPLCLEEMDATQKLHDQVKEDDDMGIYTINVMEDPDEITSFMENEGYKFPVLFDSDGDMTEDYQV VGFPVQYLVNQDQEVLFVKPGPMTFEEMESLLQQK
Specific function: Thiol-disulfide oxidoreductase with a reductive function, involved in spore cortex synthesis. It could be involved either in breaking disulfide bonds in cortex components or in proteins that are important for cortex synthesis, or in thiol/disulfide bond i
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Spore wall, spore outer membrane (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 22434; Mature: 22434
Theoretical pI: Translated: 3.55; Mature: 3.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKKSLLIILLLVLMTGSFLLSGCNPDILLDDEKEAKEEEEKETNDFEFEGTDDDLDEV CCCHHHHHHHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHH EFEVSSHTLQNLDGDEVTVPDDLEDIVLIKFWQSTCPLCLEEMDATQKLHDQVKEDDDMG HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC IYTINVMEDPDEITSFMENEGYKFPVLFDSDGDMTEDYQVVGFPVQYLVNQDQEVLFVKP EEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCHHHHCCCCCEEEEECC GPMTFEEMESLLQQK CCCCHHHHHHHHHCC >Mature Secondary Structure MFLKKSLLIILLLVLMTGSFLLSGCNPDILLDDEKEAKEEEEKETNDFEFEGTDDDLDEV CCCHHHHHHHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHH EFEVSSHTLQNLDGDEVTVPDDLEDIVLIKFWQSTCPLCLEEMDATQKLHDQVKEDDDMG HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC IYTINVMEDPDEITSFMENEGYKFPVLFDSDGDMTEDYQVVGFPVQYLVNQDQEVLFVKP EEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCHHHHCCCCCEEEEECC GPMTFEEMESLLQQK CCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]