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The map label for this gene is 188585881

Identifier: 188585881

GI number: 188585881

Start: 1328745

End: 1329224

Strand: Reverse

Name: 188585881

Synonym: Nther_1255

Alternate gene names: NA

Gene position: 1329224-1328745 (Counterclockwise)

Preceding gene: 188585882

Following gene: 188585880

Centisome position: 41.99

GC content: 31.67

Gene sequence:

>480_bases
ATGTTAGATCTTAATTATTTAATTGATGTATTGAAAGTTATCGTCTTTTCAATGCTACCTGTAGTGGAAATTAGAGGGGG
AATTCCTTTAGGAATTTCTCTAGGATTTCATCCTATTCAGGCATTTATATTTAGTGCACTAGGTAATATAGCTATAATCT
TACCTTTAATCGTGATATTAAACTTGCTTGATCCATTCTTTCGTTCTTTACCCGGAATTCGATTAATTTACGAAAAATCT
ATTGACAGAGTCCTAGCACGTAGAGATAGGTATTTAAAGTATGGAAAATACGTGTTATTCTTTTTTGTAGCAATCCCCTT
TCCTACTACCGGAGCATGGACAGCTTGCCTGGCTTCTTATATTTTTCAAATACCCAAAAAAGATTCATTTTGGATAATAA
GTACAGGAGTACTAACTGCTGGTTTAATTGTTCTATTAATTTCTCAAACAACAATTTCATTTTTAACTTTCTTAGATTAA

Upstream 100 bases:

>100_bases
AAATTTAGCTAGAATTTTACAAGTGATTATCCAAGTAATTGTAATAACTTTTGAATCACCGTAAATACAAATACAATAAA
TAAAACGCGAGGGTCTTGTC

Downstream 100 bases:

>100_bases
CCCGACCAGACTATGGTCGGGTTTTTTATTTGATGTACAAAGTTATTGCATGTTGATAACTGTAAAATCCACATTATCAA
CAACGAAATAATAAAGCGCT

Product: putative small multi-drug export

Products: NA

Alternate protein names: Small Multi-Drug Export Protein; Small Multidrug Export Protein; Smr Small Multidrug Efflux Protein; Small Multidrug Export Protein QacE; Small Multi-Drug Exporter; Small-Multidrug Export Protein; Small Multidrug Export Related Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MLDLNYLIDVLKVIVFSMLPVVEIRGGIPLGISLGFHPIQAFIFSALGNIAIILPLIVILNLLDPFFRSLPGIRLIYEKS
IDRVLARRDRYLKYGKYVLFFFVAIPFPTTGAWTACLASYIFQIPKKDSFWIISTGVLTAGLIVLLISQTTISFLTFLD

Sequences:

>Translated_159_residues
MLDLNYLIDVLKVIVFSMLPVVEIRGGIPLGISLGFHPIQAFIFSALGNIAIILPLIVILNLLDPFFRSLPGIRLIYEKS
IDRVLARRDRYLKYGKYVLFFFVAIPFPTTGAWTACLASYIFQIPKKDSFWIISTGVLTAGLIVLLISQTTISFLTFLD
>Mature_159_residues
MLDLNYLIDVLKVIVFSMLPVVEIRGGIPLGISLGFHPIQAFIFSALGNIAIILPLIVILNLLDPFFRSLPGIRLIYEKS
IDRVLARRDRYLKYGKYVLFFFVAIPFPTTGAWTACLASYIFQIPKKDSFWIISTGVLTAGLIVLLISQTTISFLTFLD

Specific function: Unknown

COG id: COG2426

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17872; Mature: 17872

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLNYLIDVLKVIVFSMLPVVEIRGGIPLGISLGFHPIQAFIFSALGNIAIILPLIVIL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
NLLDPFFRSLPGIRLIYEKSIDRVLARRDRYLKYGKYVLFFFVAIPFPTTGAWTACLASY
HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IFQIPKKDSFWIISTGVLTAGLIVLLISQTTISFLTFLD
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDLNYLIDVLKVIVFSMLPVVEIRGGIPLGISLGFHPIQAFIFSALGNIAIILPLIVIL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
NLLDPFFRSLPGIRLIYEKSIDRVLARRDRYLKYGKYVLFFFVAIPFPTTGAWTACLASY
HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IFQIPKKDSFWIISTGVLTAGLIVLLISQTTISFLTFLD
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA