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The map label for this gene is ppaC [H]

Identifier: 188585876

GI number: 188585876

Start: 1321968

End: 1323626

Strand: Reverse

Name: ppaC [H]

Synonym: Nther_1250

Alternate gene names: 188585876

Gene position: 1323626-1321968 (Counterclockwise)

Preceding gene: 188585880

Following gene: 188585849

Centisome position: 41.81

GC content: 35.08

Gene sequence:

>1659_bases
ATGAACCGATCTTACTATAAGGACAGACCTATATTTTTTTTGGGTCATAAAAAACCTGATACAGACTCAATTTGTTCAGC
TTTGGCTTACAGTAATTTTAAGAATAAAGTTAGTAACGAACATCAATTTCAGGGTGCAAGAGCAGGAGAAATAAATAAAG
AAACAGAGTTCGTATTAAATCATCTTGAGGTTGAACACCCTCCACTAATAAAAGATATTCATTCACGTGTATCTGACATG
CTTACTGAGGAACCTGTAACTATTAACCCAGATACCACAGTTAAAGAGATTAATTCTTTGTTAAAAAATAAAGAATCCAA
GTCGTTTCCAGTAGTTGATCAACACGAGCGCCTGCAAGGTCTAGTCACTATGGGAGACTTAGCTGCTAAAATTATGGACG
ATCTTGAAAAAGATTTTTTAGGACCAATTTCTTTTGAGTCCGAATCACTTGTTAAAATTTTAGCTGGTGAAGCTCTTTAC
CTAGGTAAAGATAAATCGTTAAAAGGAAAAATCATTGTGGGCGCTATGAGTCAAGATACACTCCCAAGTTTTGTTTCCCG
GGGTGACATTGTTTTGTTGGGAGATAGACAAGATGCTCAAATTAACTGTCTCAAAGCTGGTGCAAAATGTCTAATATTGA
CAGGTAATAGTCAACCAAGTTCAAAAACTAGAGATCTAGCAAAAGATAAAGATGCCTCCATCATTTCGGTACCCCATGAT
ACTTCAAAGACAGTTAGATTGTTAACCATGGCAACTCCTGTAAAAGACTTCATGAATACTGGCAACATCGTATCCTTTTA
TACCGATGACCTTACCGAAGAAGCTAAAGACGAAATGCTTGCGACAAGATATCGTAGTTACCCCGTTCTAAACCATGATA
ATCAAGTTGTAGGAACCATATCTCGAAAAGATCTATTGGGATTACAGGGAAAAGAAGTTGTTTTAATTGACCATAATGAA
AGTCATCAGGCAGTTCAGGGTATTAATGAAGCAAAGATACTAGAAATAATTGACCATCATAAATTGGGTGATCTTTCTTC
GGCAGAACCGATTTATTTTAGGAATGAACCTCTAGGAGCTACGGCTACAATAATTGCTCGTATATATCAAGAACACAATC
TAAAACCTGATCCAACAACAGCAGGTCTTTTATTAGCAGCAATTTTATCTGATACAGTTATTTTAAAATCACCTACCTGT
ACCCAACTTGATATCAGTATTGCTCAAGAATTAAGCCAAATAAGCGGACTTGATATCTACGAATTCGGTAAGAAAATGTT
TCGAAAAGGTGCAGAAGTAATAGAAGAAGCTCCTGTTCCTATGATAACAAAGGACTTTAAAGAGTACAATTTTGGAGAAA
AATTCGTTGGTATAGGACAGATGAACACGGTTGATTATCAAGATGTGAGAGAATACCTTCCCAGTATTAAAGAGGGAATG
AAAAAAATAATTACAGAAGATCAATATGATCTGTTACTTTTTCTAGTAACTGATATTGAAAGACAGGATTCTTTACTACT
GGTTGAAGGCACTGATTTGAATTGTGTTGAATCAGTATTTCAACAAAGGTTATCAGAAAATACTTTATACCTAGAAAATG
TAGTTAGCAGAAAAAAACAAGTAGTGCCACCTCTATCAAGATTTTTTTCACAAAAATAA

Upstream 100 bases:

>100_bases
TATATCCAAGTCTATTTTAGTTAAAAATAACTAAAATTTATGTTAGACTTAATGTATATGATTTACAATACGGTATGTTT
AACTCGTTAGGAGTGAGACC

Downstream 100 bases:

>100_bases
TTAACGTAATTCTTGATGTCACGATATGAAAAAAGCAGGCTCCCTAAATTAGGAAGCCTGCTTTTCTTGTTAACGGAATA
TTCTCTTACCGTCATTTATC

Product: putative manganese-dependent inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MNRSYYKDRPIFFLGHKKPDTDSICSALAYSNFKNKVSNEHQFQGARAGEINKETEFVLNHLEVEHPPLIKDIHSRVSDM
LTEEPVTINPDTTVKEINSLLKNKESKSFPVVDQHERLQGLVTMGDLAAKIMDDLEKDFLGPISFESESLVKILAGEALY
LGKDKSLKGKIIVGAMSQDTLPSFVSRGDIVLLGDRQDAQINCLKAGAKCLILTGNSQPSSKTRDLAKDKDASIISVPHD
TSKTVRLLTMATPVKDFMNTGNIVSFYTDDLTEEAKDEMLATRYRSYPVLNHDNQVVGTISRKDLLGLQGKEVVLIDHNE
SHQAVQGINEAKILEIIDHHKLGDLSSAEPIYFRNEPLGATATIIARIYQEHNLKPDPTTAGLLLAAILSDTVILKSPTC
TQLDISIAQELSQISGLDIYEFGKKMFRKGAEVIEEAPVPMITKDFKEYNFGEKFVGIGQMNTVDYQDVREYLPSIKEGM
KKIITEDQYDLLLFLVTDIERQDSLLLVEGTDLNCVESVFQQRLSENTLYLENVVSRKKQVVPPLSRFFSQK

Sequences:

>Translated_552_residues
MNRSYYKDRPIFFLGHKKPDTDSICSALAYSNFKNKVSNEHQFQGARAGEINKETEFVLNHLEVEHPPLIKDIHSRVSDM
LTEEPVTINPDTTVKEINSLLKNKESKSFPVVDQHERLQGLVTMGDLAAKIMDDLEKDFLGPISFESESLVKILAGEALY
LGKDKSLKGKIIVGAMSQDTLPSFVSRGDIVLLGDRQDAQINCLKAGAKCLILTGNSQPSSKTRDLAKDKDASIISVPHD
TSKTVRLLTMATPVKDFMNTGNIVSFYTDDLTEEAKDEMLATRYRSYPVLNHDNQVVGTISRKDLLGLQGKEVVLIDHNE
SHQAVQGINEAKILEIIDHHKLGDLSSAEPIYFRNEPLGATATIIARIYQEHNLKPDPTTAGLLLAAILSDTVILKSPTC
TQLDISIAQELSQISGLDIYEFGKKMFRKGAEVIEEAPVPMITKDFKEYNFGEKFVGIGQMNTVDYQDVREYLPSIKEGM
KKIITEDQYDLLLFLVTDIERQDSLLLVEGTDLNCVESVFQQRLSENTLYLENVVSRKKQVVPPLSRFFSQK
>Mature_552_residues
MNRSYYKDRPIFFLGHKKPDTDSICSALAYSNFKNKVSNEHQFQGARAGEINKETEFVLNHLEVEHPPLIKDIHSRVSDM
LTEEPVTINPDTTVKEINSLLKNKESKSFPVVDQHERLQGLVTMGDLAAKIMDDLEKDFLGPISFESESLVKILAGEALY
LGKDKSLKGKIIVGAMSQDTLPSFVSRGDIVLLGDRQDAQINCLKAGAKCLILTGNSQPSSKTRDLAKDKDASIISVPHD
TSKTVRLLTMATPVKDFMNTGNIVSFYTDDLTEEAKDEMLATRYRSYPVLNHDNQVVGTISRKDLLGLQGKEVVLIDHNE
SHQAVQGINEAKILEIIDHHKLGDLSSAEPIYFRNEPLGATATIIARIYQEHNLKPDPTTAGLLLAAILSDTVILKSPTC
TQLDISIAQELSQISGLDIYEFGKKMFRKGAEVIEEAPVPMITKDFKEYNFGEKFVGIGQMNTVDYQDVREYLPSIKEGM
KKIITEDQYDLLLFLVTDIERQDSLLLVEGTDLNCVESVFQQRLSENTLYLENVVSRKKQVVPPLSRFFSQK

Specific function: Unknown

COG id: COG1227

COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001807
- InterPro:   IPR000644
- InterPro:   IPR004097
- InterPro:   IPR010766
- InterPro:   IPR001667 [H]

Pfam domain/function: PF00571 CBS; PF01368 DHH; PF02833 DHHA2; PF07085 DRTGG [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 61799; Mature: 61799

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSYYKDRPIFFLGHKKPDTDSICSALAYSNFKNKVSNEHQFQGARAGEINKETEFVLN
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHH
HLEVEHPPLIKDIHSRVSDMLTEEPVTINPDTTVKEINSLLKNKESKSFPVVDQHERLQG
HHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LVTMGDLAAKIMDDLEKDFLGPISFESESLVKILAGEALYLGKDKSLKGKIIVGAMSQDT
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCH
LPSFVSRGDIVLLGDRQDAQINCLKAGAKCLILTGNSQPSSKTRDLAKDKDASIISVPHD
HHHHHCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHCCCCCCEEECCCC
TSKTVRLLTMATPVKDFMNTGNIVSFYTDDLTEEAKDEMLATRYRSYPVLNHDNQVVGTI
CCCCEEEEEHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
SRKDLLGLQGKEVVLIDHNESHQAVQGINEAKILEIIDHHKLGDLSSAEPIYFRNEPLGA
CHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCH
TATIIARIYQEHNLKPDPTTAGLLLAAILSDTVILKSPTCTQLDISIAQELSQISGLDIY
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEHHHHHHHHHHHCCCCHH
EFGKKMFRKGAEVIEEAPVPMITKDFKEYNFGEKFVGIGQMNTVDYQDVREYLPSIKEGM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHH
KKIITEDQYDLLLFLVTDIERQDSLLLVEGTDLNCVESVFQQRLSENTLYLENVVSRKKQ
HHHHCCCCHHEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
VVPPLSRFFSQK
CCCHHHHHHCCC
>Mature Secondary Structure
MNRSYYKDRPIFFLGHKKPDTDSICSALAYSNFKNKVSNEHQFQGARAGEINKETEFVLN
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHH
HLEVEHPPLIKDIHSRVSDMLTEEPVTINPDTTVKEINSLLKNKESKSFPVVDQHERLQG
HHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LVTMGDLAAKIMDDLEKDFLGPISFESESLVKILAGEALYLGKDKSLKGKIIVGAMSQDT
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCH
LPSFVSRGDIVLLGDRQDAQINCLKAGAKCLILTGNSQPSSKTRDLAKDKDASIISVPHD
HHHHHCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHCCCCCCEEECCCC
TSKTVRLLTMATPVKDFMNTGNIVSFYTDDLTEEAKDEMLATRYRSYPVLNHDNQVVGTI
CCCCEEEEEHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
SRKDLLGLQGKEVVLIDHNESHQAVQGINEAKILEIIDHHKLGDLSSAEPIYFRNEPLGA
CHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCH
TATIIARIYQEHNLKPDPTTAGLLLAAILSDTVILKSPTCTQLDISIAQELSQISGLDIY
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEHHHHHHHHHHHCCCCHH
EFGKKMFRKGAEVIEEAPVPMITKDFKEYNFGEKFVGIGQMNTVDYQDVREYLPSIKEGM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHH
KKIITEDQYDLLLFLVTDIERQDSLLLVEGTDLNCVESVFQQRLSENTLYLENVVSRKKQ
HHHHCCCCHHEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
VVPPLSRFFSQK
CCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]