Click here to switch to the map view.

The map label for this gene is 188585778

Identifier: 188585778

GI number: 188585778

Start: 1218439

End: 1219827

Strand: Reverse

Name: 188585778

Synonym: Nther_1152

Alternate gene names: NA

Gene position: 1219827-1218439 (Counterclockwise)

Preceding gene: 188585783

Following gene: 188585777

Centisome position: 38.53

GC content: 35.13

Gene sequence:

>1389_bases
ATGGAAATAATTCAACTTGTAGAAGAAAAAATCCTTCAAGTTTCAGAAAAAGTGTTAAATGTTTTAGACGGAGAAATAGA
GTACGATACATTCACAAAGCTACTAAAAGAAGAGCTAGACGGTTTAGGTAGTGATATTCTTAAAGAAGTACTAGAAGCAT
TGGATGCCCAAATAAAAGAAAATAGAAGAGATCGTAAAGGTTGGGTCGTAGAAAGGAAAGCTGACCCCAAGAGTATCTTA
ACCCCATTTGGTGATATGGTATACAACCGAACATATTATAAAAATAAAGAAACAGGTGAATATAAATATCTAGCTGATGA
AAAAGCTGGCATAACCTCACATATGCGAGTAGATTCTACTTTAAAATCAGATATAGCTGATGCAGCCACTAAGGTGTCGT
ATGAGAAAGCGACAGAAGAAGTGAGTAGGTTTAACCAAGACCTAAAATTAAGTAAACAGACAGTAGCCAATACAGTGAAA
GAATTTGAATTAGAACCTCTAGAGCAACCAGAAGAAAAGAAAAAAGTATCAAACCTTTACATAGAGGCAGATGAAGATCA
TTTGTCTATGCAAACTTCGAAGAGATCTGAAACAAAGCTAATTTATGTCCATGAAGGAATAAAAGGTAAAAAACGTAGAT
CTCTTAAAAATTGTCAACATTTCACAACAATAACTGAATCCCCGGATAAATTTTGGTTAACAGTATGTGACTATATCGAA
TCACATTATGACACAAAGGACACAAATATTTTCATATCAGGAGATGGGGCTAAATGGATCCGAGTAGGTGAAGAATATAT
CCCAAATGCGACATATATATTGGATAAATTTCATCTATCCAAATACATAATAGCAGCTACCGGTCATGCCCCAAAGCTAA
GGAGACAGATATATAAGAACATTAAAAACCTAGATCAAGAAGCAGTATTTGAAAATTTACAAGAAGCACTTACAAAGGCA
GATACAGAAGCTAGACAGAAACGCATAATGGCAACAATTAAATATATTAAAAACAACTGGGATGGCATAGAGGCATCAGT
AAACCACCCTGAAGTAGGTTGTAGTGCTGAAGGCCATGTAAGCCATATTTTAGCATCAAGAATGAGTAGTCGACCAATGG
CCTGGAGTGAAAAAGGCGCAACTAAAATGGCCGAGATGTTGGCTACAAAAGCTAATGGAAAATCAGTAAAAGAAGCTTAC
TTATCCACAAAAGGTCGTCAAGAAGCTGAAATAGTTAACCTACAGAACCAAATAAAACAAGAACTAAAAAAACTTACAAC
TAAAAAGAAACTAGGAAAAGCCAACAATGGCAATGTACCTTTGATGAATGGAAAGTACAACTTAACAAGAACGGCTATAA
AAGGGTTGAACAGGAAACAGATTATCTAG

Upstream 100 bases:

>100_bases
TGGAGAAAGCAGGAAGGAAAGGAAGCAAAAAAGAAGAGGAACCTCACATTCTCCGCACGAGAATGAAGTATACCCAAAAA
AGTAAGGAGTGAGGTTCCTC

Downstream 100 bases:

>100_bases
GAGAATTAAGGTTTCTTTTTAACCTACAGTGGCTTGACACGATCAAAAGTATTACTTCGTTTGAAAACATAAAAAATTTT
TCTTATAATCAGTTAGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MEIIQLVEEKILQVSEKVLNVLDGEIEYDTFTKLLKEELDGLGSDILKEVLEALDAQIKENRRDRKGWVVERKADPKSIL
TPFGDMVYNRTYYKNKETGEYKYLADEKAGITSHMRVDSTLKSDIADAATKVSYEKATEEVSRFNQDLKLSKQTVANTVK
EFELEPLEQPEEKKKVSNLYIEADEDHLSMQTSKRSETKLIYVHEGIKGKKRRSLKNCQHFTTITESPDKFWLTVCDYIE
SHYDTKDTNIFISGDGAKWIRVGEEYIPNATYILDKFHLSKYIIAATGHAPKLRRQIYKNIKNLDQEAVFENLQEALTKA
DTEARQKRIMATIKYIKNNWDGIEASVNHPEVGCSAEGHVSHILASRMSSRPMAWSEKGATKMAEMLATKANGKSVKEAY
LSTKGRQEAEIVNLQNQIKQELKKLTTKKKLGKANNGNVPLMNGKYNLTRTAIKGLNRKQII

Sequences:

>Translated_462_residues
MEIIQLVEEKILQVSEKVLNVLDGEIEYDTFTKLLKEELDGLGSDILKEVLEALDAQIKENRRDRKGWVVERKADPKSIL
TPFGDMVYNRTYYKNKETGEYKYLADEKAGITSHMRVDSTLKSDIADAATKVSYEKATEEVSRFNQDLKLSKQTVANTVK
EFELEPLEQPEEKKKVSNLYIEADEDHLSMQTSKRSETKLIYVHEGIKGKKRRSLKNCQHFTTITESPDKFWLTVCDYIE
SHYDTKDTNIFISGDGAKWIRVGEEYIPNATYILDKFHLSKYIIAATGHAPKLRRQIYKNIKNLDQEAVFENLQEALTKA
DTEARQKRIMATIKYIKNNWDGIEASVNHPEVGCSAEGHVSHILASRMSSRPMAWSEKGATKMAEMLATKANGKSVKEAY
LSTKGRQEAEIVNLQNQIKQELKKLTTKKKLGKANNGNVPLMNGKYNLTRTAIKGLNRKQII
>Mature_462_residues
MEIIQLVEEKILQVSEKVLNVLDGEIEYDTFTKLLKEELDGLGSDILKEVLEALDAQIKENRRDRKGWVVERKADPKSIL
TPFGDMVYNRTYYKNKETGEYKYLADEKAGITSHMRVDSTLKSDIADAATKVSYEKATEEVSRFNQDLKLSKQTVANTVK
EFELEPLEQPEEKKKVSNLYIEADEDHLSMQTSKRSETKLIYVHEGIKGKKRRSLKNCQHFTTITESPDKFWLTVCDYIE
SHYDTKDTNIFISGDGAKWIRVGEEYIPNATYILDKFHLSKYIIAATGHAPKLRRQIYKNIKNLDQEAVFENLQEALTKA
DTEARQKRIMATIKYIKNNWDGIEASVNHPEVGCSAEGHVSHILASRMSSRPMAWSEKGATKMAEMLATKANGKSVKEAY
LSTKGRQEAEIVNLQNQIKQELKKLTTKKKLGKANNGNVPLMNGKYNLTRTAIKGLNRKQII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0236 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009620 [H]

Pfam domain/function: PF06782 UPF0236 [H]

EC number: NA

Molecular weight: Translated: 52750; Mature: 52750

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIQLVEEKILQVSEKVLNVLDGEIEYDTFTKLLKEELDGLGSDILKEVLEALDAQIKE
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NRRDRKGWVVERKADPKSILTPFGDMVYNRTYYKNKETGEYKYLADEKAGITSHMRVDST
CCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHCCCCCCCCEEEECCCCCCCHHHHHHHHH
LKSDIADAATKVSYEKATEEVSRFNQDLKLSKQTVANTVKEFELEPLEQPEEKKKVSNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEE
IEADEDHLSMQTSKRSETKLIYVHEGIKGKKRRSLKNCQHFTTITESPDKFWLTVCDYIE
EECCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SHYDTKDTNIFISGDGAKWIRVGEEYIPNATYILDKFHLSKYIIAATGHAPKLRRQIYKN
HHCCCCCCEEEEECCCCHHEECCHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
IKNLDQEAVFENLQEALTKADTEARQKRIMATIKYIKNNWDGIEASVNHPEVGCSAEGHV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
SHILASRMSSRPMAWSEKGATKMAEMLATKANGKSVKEAYLSTKGRQEAEIVNLQNQIKQ
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
ELKKLTTKKKLGKANNGNVPLMNGKYNLTRTAIKGLNRKQII
HHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEIIQLVEEKILQVSEKVLNVLDGEIEYDTFTKLLKEELDGLGSDILKEVLEALDAQIKE
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NRRDRKGWVVERKADPKSILTPFGDMVYNRTYYKNKETGEYKYLADEKAGITSHMRVDST
CCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHCCCCCCCCEEEECCCCCCCHHHHHHHHH
LKSDIADAATKVSYEKATEEVSRFNQDLKLSKQTVANTVKEFELEPLEQPEEKKKVSNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEE
IEADEDHLSMQTSKRSETKLIYVHEGIKGKKRRSLKNCQHFTTITESPDKFWLTVCDYIE
EECCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SHYDTKDTNIFISGDGAKWIRVGEEYIPNATYILDKFHLSKYIIAATGHAPKLRRQIYKN
HHCCCCCCEEEEECCCCHHEECCHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
IKNLDQEAVFENLQEALTKADTEARQKRIMATIKYIKNNWDGIEASVNHPEVGCSAEGHV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
SHILASRMSSRPMAWSEKGATKMAEMLATKANGKSVKEAYLSTKGRQEAEIVNLQNQIKQ
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
ELKKLTTKKKLGKANNGNVPLMNGKYNLTRTAIKGLNRKQII
HHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]