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The map label for this gene is yhbQ [C]

Identifier: 188585700

GI number: 188585700

Start: 1130819

End: 1131091

Strand: Reverse

Name: yhbQ [C]

Synonym: Nther_1073

Alternate gene names: 188585700

Gene position: 1131091-1130819 (Counterclockwise)

Preceding gene: 188585703

Following gene: 188585692

Centisome position: 35.73

GC content: 29.3

Gene sequence:

>273_bases
ATGTATTTTACATACATAATAGAATGTTCCGATAGCACACTATACACTGGTTATACAACCGATATTACTTATCGGATAAA
AAAACACAATGAAGGTAAAGCTGCTAAATACACAAAATTTAGAGTTCCTGTTAAACTAAAATACCACGAAAAATTCAGCA
CTAAGTCAGAAGCTATGAAAAGAGAAAGAGCAATAAAAAAGATGAGCCGACAGGAAAAACTAAATCTAATTTATAAAAAG
CAATCAAATACTTTAAATCTCAAATCCAAGTAA

Upstream 100 bases:

>100_bases
AGTCCCGTTTTACTTATCCAGATATCTAATATAAAATATCAGTAGACTCTCTAATTACTAAAGATAAAAAATTAGTAGAC
TAAGGAAAGAGGTAGAAATA

Downstream 100 bases:

>100_bases
AACTGATTGATCTCAAATAGCTTAAATTGACTAAATTGACCTTAGAATTGGCCTTACTTATAGAATAACTACTTCTTATT
CATTTTCATTTATTTTCAGC

Product: Excinuclease ABC C subunit domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MYFTYIIECSDSTLYTGYTTDITYRIKKHNEGKAAKYTKFRVPVKLKYHEKFSTKSEAMKRERAIKKMSRQEKLNLIYKK
QSNTLNLKSK

Sequences:

>Translated_90_residues
MYFTYIIECSDSTLYTGYTTDITYRIKKHNEGKAAKYTKFRVPVKLKYHEKFSTKSEAMKRERAIKKMSRQEKLNLIYKK
QSNTLNLKSK
>Mature_90_residues
MYFTYIIECSDSTLYTGYTTDITYRIKKHNEGKAAKYTKFRVPVKLKYHEKFSTKSEAMKRERAIKKMSRQEKLNLIYKK
QSNTLNLKSK

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10785; Mature: 10785

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFTYIIECSDSTLYTGYTTDITYRIKKHNEGKAAKYTKFRVPVKLKYHEKFSTKSEAMK
CEEEEEEEECCCEEEEEEECEEEEEEEECCCCCCCEEEEEECEEEEEECCCCCCHHHHHH
RERAIKKMSRQEKLNLIYKKQSNTLNLKSK
HHHHHHHHHHHHHEEEEEECCCCEEEECCC
>Mature Secondary Structure
MYFTYIIECSDSTLYTGYTTDITYRIKKHNEGKAAKYTKFRVPVKLKYHEKFSTKSEAMK
CEEEEEEEECCCEEEEEEECEEEEEEEECCCCCCCEEEEEECEEEEEECCCCCCHHHHHH
RERAIKKMSRQEKLNLIYKKQSNTLNLKSK
HHHHHHHHHHHHHEEEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA